| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1751528 | 95 (0.820) | 6 (0.050) | 6/280 | 14.8 | 6.2% | coding (197/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex |
| ? | NC_000913 | = 1751544 | 91 (0.830) | coding (181/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGACATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1751373‑1751528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGA < NC_000913/1751544‑1751397 AAGACATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGG > 1:773500/1‑150 AGACATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGG > 4:38952/1‑150 GACATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGT > 4:551205/1‑150 ATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGC < 1:82633/150‑1 TGGCCTGCGTTGAGTAATAGTAATCTTCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGTCAGTCCCTCTCCTGCAACCAATTAGGGTGGCGCGCGCCGTGTTTCTCTCGCCA < 2:895715/150‑1 GCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGCGCGCGCCGTGTTTCTCTCGCCACC < 2:845410/150‑1 GTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTT < 3:347279/150‑1 GAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGT < 1:988337/150‑1 TCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGCTCCTCTTCTGCAACCAAATAGGGTGGCGCGCGCCGTGTTTCTCTCGCCACCC > 1:263808/1‑89 TCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGCTCCTCTTCTGCAACCAAATAGGGTGGCGCGCGCCGTGTTTCTCTCGCCACCC < 2:263808/89‑1 GTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCC > 1:920627/1‑150 GTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGAATTAAGCAGAACGGAGACTACGCGGATATCGCTTATTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCC > 1:1072675/1‑150 TGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGCCTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCA > 4:404606/1‑150 GGCGGGCGCCGTGTTGCGCTCGCTACCCTATTTGGTTGGAGAAGAGGAGCTGGCAGTTTTGATGGAAAGCATTAAGCAGAACGGAGACGACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCAT > 4:144463/1‑150 GGCGCGCGCCGTGTTTCTCTCGCCTCCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCAT < 1:1013479/150‑1 GGCGCGCGCCGTCTTTCTCTCGCCACCCTATTTGTTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCATCGCAGGCCAT < 4:400261/150‑1 CGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGA < 2:639176/150‑1 AAGACATCGCCGCGTAGTTTTCACTCATGGCCTGCGTTGAGTAATAGTAATCATCCTTGCTTCCCGTCAAACAAGCGATATCCGCGTAGTCTCCGTTCTGCTTAATGCTTTCCAGCAAAACTGACAGTTCCTCTTCTGCAACCAAATAGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1751373‑1751528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcgCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGA < NC_000913/1751544‑1751397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |