| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4372698 = | 117 (1.270) | 3 (0.030) | 3/242 | NT | 2.6% | intergenic (+27/‑111) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
| ? | NC_000913 | 4372728 = | 111 (1.290) | intergenic (+57/‑81) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4372851‑4372698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtttTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCA > NC_000913/4372728‑4372872 GTAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGG < 5:175619/149‑1GTAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGG > 8:54029/1‑149 TAGCGCGGCACCGAGAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGG < 5:158118/149‑1 TAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGG < 1:418697/149‑1 TAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGG < 4:223862/149‑1 GCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCACTGAGCTGGACGCCACTCGCTTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTT < 4:38067/149‑1 GCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATACCCTATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTT < 3:114252/149‑1 GTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGG < 1:62358/139‑1 GTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGG > 2:62358/1‑139 CAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTC > 7:190644/1‑149 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCCGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCT > 8:402417/1‑149 GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGC > 8:164002/1‑148 GTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACCCGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGCGATTGTCGGTGCCGCGCTACAGATTGCGGGTAGTAGCTC > 1:352834/1‑147 GTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCA > 8:63535/1‑149 GTAGCGCGGCACCGACAATCCCTGCTAAGTATTTTACGTGCATGTTATTCCCCATAATCAATGAGCTGGACGCCACTCGCGTCGTCCGTGTCTGAATCTTATACTAGAAAGATGACCAAAAGAAAAACCCCCAGACATTTCTGCCCGGGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4372851‑4372698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtttTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCA > NC_000913/4372728‑4372872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |