New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4589108	39 (1.120)	6 (0.180)	6/238	3.3	14.5%	intergenic (‑29/+21)	yjiX/yjiY	DUF466 family protein/putative transporter
	?	NC_000913	= 4589112	34 (1.040)					intergenic (‑33/+17)	yjiX/yjiY	DUF466 family protein/putative transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTTGTCGGGATGGTTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCAAGCCAGGTTTTGAAACCGTAGAAGAT  >  NC_000913/4588962‑4589245                                                                                                                                                   |                                                                                                                                          gCTTGTCGGGATGGTTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCccgctt                                                                                                                                         >  2:116728/1‑147 (MQ=255)       cGGGATGGTTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCgg                                                                                                                                   <  8:128214/149‑1 (MQ=255)       cGGGATGGGTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCgg                                                                                                                                   <  6:130312/149‑1 (MQ=255)        gggATGGTTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCggg                                                                                                                                  >  4:148735/1‑149 (MQ=255)                tggtCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAaca                                                                                                                          <  3:148735/149‑1 (MQ=255)                 ggtCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCTTCGGCGGGGCtttgttc                                                                                                                         >  3:49788/1‑143 (MQ=255)                      tCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGACAATCAACATCTTCGCCGCCTGGCCGAGATATTATTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAATCCCCGCCGAAGCGGGTCTAAACACGGTTa                                                                                                                    >  4:81641/1‑149 (MQ=255)                             cTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGc                                                                                                             <  6:134767/149‑1 (MQ=255)                                gACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGaa                                                                                                          <  7:130516/149‑1 (MQ=255)                                            gTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCAc                                                                                               <  8:71415/148‑1 (MQ=255)                                                         ccAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGa                                                                                 >  1:137828/1‑149 (MQ=255)                                                          cAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGc                                                                                                             <  2:89070/120‑1 (MQ=255)                                                          cAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGc                                                                                                             >  1:89070/1‑120 (MQ=255)                                                              cAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCgg                                                                                                                                   >  6:69240/1‑94 (MQ=255)                                                              cAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCgg                                                                                                                                   <  5:69240/94‑1 (MQ=255)                                                                aCATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGaa                                                                           <  2:171765/148‑1 (MQ=255)                                                                aCATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGaa                                                                           >  1:171765/1‑148 (MQ=255)                                                                aCATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAAc                                                                          >  8:42274/1‑149 (MQ=255)                                                                       cgccgcCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACg                                                                     <  7:42274/147‑1 (MQ=255)                                                                        gccgccTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGaa                                                                                                          <  3:51837/109‑1 (MQ=255)                                                                        gccgccTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGaa                                                                                                          >  4:51837/1‑109 (MQ=255)                                                                                 ccGAGATA‑TTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTaa                                                                                                                             <  4:116660/80‑1 (MQ=255)                                                                                 ccGAGATA‑TTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTaa                                                                                                                             >  3:116660/1‑80 (MQ=255)                                                                                          ttttttGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCtt                                                                                                  <  1:118985/99‑1 (MQ=255)                                                                                          ttttttGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCtt                                                                                                  >  2:118985/1‑99 (MQ=255)                                                                                                 ccTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCt                                         <  2:137828/149‑1 (MQ=255)                                                                                                     tCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATc                                                                                                    <  5:79821/86‑1 (MQ=255)                                                                                                     tCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATc                                                                                                    >  6:79821/1‑86 (MQ=255)                                                                                                         aaGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGc                                                                                                             >  7:38144/1‑73 (MQ=255)                                                                                                         aaGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGc                                                                                                             <  8:38144/73‑1 (MQ=255)                                                                                                             tACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCg                              >  6:109274/1‑148 (MQ=255)                                                                                                              aCCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCt                                         <  3:125854/136‑1 (MQ=255)                                                                                                              aCCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCt                                         >  4:125854/1‑136 (MQ=255)                                                                                                               ccAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCttt                                                           <  2:140722/117‑1 (MQ=255)                                                                                                               ccAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCttt                                                           >  1:140722/1‑117 (MQ=255)                                                                                                               ccAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCaa                           <  5:109274/149‑1 (MQ=255)                                                                                                                        gTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAAc                                                                          <  1:104964/93‑1 (MQ=255)                                                                                                                        gTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAAc                                                                          >  2:104964/1‑93 (MQ=255)                                                                                                                         ttCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAATCACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCAAGCCAGGtttt                 <  3:81641/149‑1 (MQ=255)                                                                                                                              tctGATAAGAACAAAGCCTCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCAAGCCAGGTTTTGAAAc            >  4:55793/1‑149 (MQ=255)                                                                                                                                         cAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCAAGCCAGGTTTTGAAACCGTAGAAgat  >  3:60779/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                          GCTTGTCGGGATGGTTGGTCTTCATATGCTCGACGTAGTTGTCGTAGTCTGGAATGCCAATCAACATCTTCGCCGCCTGGCCGAGATATTTTTTTGCCTGTCCTAAGTTACCAAACATAGTTCACTCTGATAAGAACAAAGCCCCGCCGAAGCGGGGCTAAACACGGTTAGTGGTGCGAAGAGATCTTCACGCCGCCTTCCGGGATTGGAACGTACGGTGTTTCTTTGTCAGTACGTTTGTCGCTGTTACGCACCGCAAGCCAGGTTTTGAAACCGTAGAAGAT  >  NC_000913/4588962‑4589245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.