New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 59280 =56 (1.610)9 (0.300) 9/220 2.3 16.0% intergenic (+1/+407) yabP/rluA pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent
?NC_000913 59320 = 46 (1.530)intergenic (+41/+367) yabP/rluA pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent
Rejected: Frequency below/above cutoff threshold.

CCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCATGAATAAC  >  NC_000913/59174‑59458
                                                                                                                                                  |                                                                                                                                          
gatgcccatctcggtgatccgtgtcctgcacgacgccttgcgtcactagcctcttctctagctcatcatgcaggtctttctaattgtgaaatcatcccacgctactGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAg                                                                                                                                           <  1:181207‑M1/42‑1 (MQ=255)
 atgcccatctcggtgatccgtgtcctgcacgacgccttgcgtcactagcctcttctctagctcatcatgcaggtctttctaattgtgaaatcatcccacgctactGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAg                                                                                                                                           <  3:53298‑M1/42‑1 (MQ=255)
     aaaaaaTTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                                     >  2:76746/1‑149 (MQ=255)
                   aaaGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTcac                                                                                                                        >  8:77262/1‑148 (MQ=255)
                      ggAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAAt                                                                                                                     >  3:42249/1‑148 (MQ=255)
                            cacgacgccttgcgtcactagcctcttctctagctcatcatgcaggtctttctaattgtgaaatcatcccacgctactGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGaaa                                                                                                               >  2:181207‑M1/79‑148 (MQ=255)
                              tACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGAc                                                                                                            >  6:46902/1‑149 (MQ=255)
                                  gaagaaGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACATTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTg                                                                                                         >  1:139274/1‑148 (MQ=255)
                                          tcactagcctcttctctagctcatcatgcaggtctttctaattgtgaaatcatcccacgctactGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAg                                                                                                >  4:53298‑M1/65‑149 (MQ=255)
                                             tactaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                               >  6:67489/1‑147 (MQ=255)
                                             tactaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                               >  3:25685/1‑147 (MQ=255)
                                               ctaAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTa                                                                                             <  7:77262/147‑1 (MQ=255)
                                                taAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTg                                                                                                                                    <  2:126510/107‑1 (MQ=255)
                                                  aaaaaGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTagag                                                                                          >  5:9882/1‑147 (MQ=255)
                                                  aaaaaGTACTGCTGAACAAATTACTGACAAAGCAATTATTGAATGATCCAGAATAAGATAAGGATGAATGGGCTGGAACGCCACTTCAAACTTATCAGTAGAGTGGGATGATTTCACAATTATAAAGACCTGCATGATGAGATatag                                                                                          >  3:46012/1‑147 (MQ=255)
                                                         aCTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                                     <  6:81655/97‑1 (MQ=255)
                                                         aCTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGt                                                                                                                                     >  5:81655/1‑97 (MQ=255)
                                                          ctgctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAg                                                                                <  2:139274/149‑1 (MQ=255)
                                                           tgctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGga                                                                                                                                 >  1:144299/1‑99 (MQ=255)
                                                           tgctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGga                                                                                                                                 <  2:144299/99‑1 (MQ=255)
                                                           tgctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                               <  1:174554/133‑1 (MQ=255)
                                                           tgctgAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                               >  2:174554/1‑133 (MQ=255)
                                                            gctcatcatgcaggtctttctaattgtgaaatcatcccacgctactGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTc                                                                                                                          >  4:30270‑M1/47‑105 (MQ=255)
                                                             ctcatcatgcaggtctttctaattgtgaaatcatcccacgctactgctaaggttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGa                                                                             >  4:53298‑M2/86‑149 (MQ=255)
                                                               gAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACg                                                                           >  7:34126/1‑149 (MQ=255)
                                                                   aaaTTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTa                                                                                 >  6:123285/1‑139 (MQ=255)
                                                                   aaaTTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTa                                                                                 <  5:123285/139‑1 (MQ=255)
                                                                    aaTTACTGACAACTCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGTGGCTGGAAAGCCCCTTAAACCTTAGCAGTAGCGTGTGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACTCAAgg                                                                      <  4:46012/149‑1 (MQ=255)
                                                                    aaTTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCGGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTa                                                                                             >  1:115684/1‑126 (MQ=255)
                                                                    aaTTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCGGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTa                                                                                             <  2:115684/126‑1 (MQ=255)
                                                                       tACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGcgt                                                                   >  6:145331/1‑149 (MQ=255)
                                                                            tttctaattgtgaaatcatcccacgctactgctaaggttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTg                                                               >  2:181207‑M2/71‑148 (MQ=255)
                                                                            aCAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGcgtcgt                                                                <  1:76746/147‑1 (MQ=255)
                                                                                cGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGa                                                          <  5:46902/149‑1 (MQ=255)
                                                                                  cAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGaca                                                        <  4:42249/149‑1 (MQ=255)
                                                                                   aaTTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaag                                                                                       <  4:110482/117‑1 (MQ=255)
                                                                                   aaTTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaag                                                                                       >  3:110482/1‑117 (MQ=255)
                                                                                     ttattGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCg                                                                                                                                      >  7:88521/1‑68 (MQ=255)
                                                                                     ttattGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCg                                                                                                                                      <  8:88521/68‑1 (MQ=255)
                                                                                     ttattGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAg                                                            >  8:134819/1‑142 (MQ=255)
                                                                                     ttattGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAg                                                            <  7:134819/142‑1 (MQ=255)
                                                                                       gaaatcatcccacgctactgctaaggttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGc                                                                                               >  4:30270‑M2/60‑105 (MQ=255)
                                                                                       attGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGc                                                                                   >  5:139158/1‑117 (MQ=255)
                                                                                       attGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGc                                                                                   <  6:139158/117‑1 (MQ=255)
                                                                                       attGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGa                                                    <  5:67489/148‑1 (MQ=255)
                                                                                        ttGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGAttt                                                                                                                           >  8:50219/1‑76 (MQ=255)
                                                                                        ttGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGAttt                                                                                                                           <  7:50219/76‑1 (MQ=255)
                                                                                                gCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGAt                                          <  4:25685/149‑1 (MQ=255)
                                                                                                  cAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATgg                                        <  5:145331/149‑1 (MQ=255)
                                                                                                     aaTAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGc                                                                                                        >  5:126165/1‑82 (MQ=255)
                                                                                                     aaTAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGc                                                                                                        <  6:126165/82‑1 (MQ=255)
                                                                                                       tAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATc                                   <  6:9882/149‑1 (MQ=255)
                                                                                                        ctgctaaggttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCAt                                    <  3:53298‑M2/105‑1 (MQ=255)
                                                                                                        ctgctaaggttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATc                                   <  1:181207‑M2/106‑1 (MQ=255)
                                                                                                            TAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGa                                                                             <  4:148943‑M1/102‑1 (MQ=255)
                                                                                                            TAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGa                                                                             >  3:148943‑M1/1‑102 (MQ=255)
                                                                                                            TAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCaa                              <  8:40649‑M1/149‑1 (MQ=255)
                                                                                                                gttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaag                                                                                       >  8:44678‑M2/35‑88 (MQ=255)
                                                                                                                gttgaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGagaag                                                                                       <  7:44678‑M2/54‑1 (MQ=255)
                                                                                                                   gaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCat                                                                                                      >  5:135459‑M2/32‑70 (MQ=255)
                                                                                                                   gaaggggcgttccagccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCat                                                                                                      <  6:135459‑M2/39‑1 (MQ=255)
                                                                                                                      GGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATgg                                        <  3:27065‑M1/129‑1 (MQ=255)
                                                                                                                      GGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATgg                                        >  4:27065‑M1/1‑129 (MQ=255)
                                                                                                                      GGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACt                       <  4:7584‑M1/146‑1 (MQ=255)
                                                                                                                      GGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACt                       >  3:7584‑M1/1‑146 (MQ=255)
                                                                                                                           tGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAAt                 >  6:103857/1‑147 (MQ=255)
                                                                                                                            ggAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAg              >  5:129797/1‑149 (MQ=255)
                                                                                                                                 gccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCAt         <  8:34126‑M2/132‑1 (MQ=255)
                                                                                                                                 gccccttcaaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCAt         <  6:129797‑M2/132‑1 (MQ=255)
                                                                                                                                        caaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCATGAATaa   <  7:40649‑M2/138‑1 (MQ=255)
                                                                                                                                         aaccttagcAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCATGAATAAc  <  5:103857‑M2/139‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                          
CCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAAGCTAAGGTTGAAGGGGCTGGAACGCCCCTTCAACCTTAGCAGTAGCGTGGGATGATTTCACAATTAGAAAGACCTGCATGATGAGCTAGAGAAGAGGCTAGTGACGCAAGGCGTCGTGCAGGACACGGATCACCGAGATGGGCATCGCCAACCAGACTGCTAATTAGCCCATGAATAAC  >  NC_000913/59174‑59458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.