| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,801,411 | IS5 (–) +4 bp | coding (586‑589/1017 nt) | waaR ← | lipopolysaccharide 1,2‑glucosyltransferase; UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 194 (1.690) | 111/272 | 0.0 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3801414 | 0 (0.000) | coding (586/1017 nt) | waaR | lipopolysaccharide 1,2‑glucosyltransferase; UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 167 (1.450) | 97/272 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3801411 = | 0 (0.000) | coding (589/1017 nt) | waaR | lipopolysaccharide 1,2‑glucosyltransferase; UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase | |||||
Only 100 of 356 total aligned reads displayed.
TCTTTTAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTT > NC_000913/3801263‑3801559 | cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 7:425945‑M2/1‑1 (MQ=255)cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 7:474772‑M2/1‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct > 6:372820‑M2/147‑147 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 2:477538‑M2/3‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:95643‑M2/3‑1 (MQ=255) tttAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAg > 8:343183/1‑149 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 8:380397‑M2/146‑149 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 2:239449‑M2/4‑1 (MQ=255) gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 7:65462‑M2/4‑1 (MQ=255) ttAATTCACTTTTAATTGTATAAATTGTATTGTACTCAAGAGGCAAAAATAATGTAATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGtt < 5:217467/146‑1 (MQ=255) acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt < 2:98358‑M2/5‑1 (MQ=255) acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt < 3:446169‑M2/5‑1 (MQ=255) acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt < 6:43368‑M2/5‑1 (MQ=255) acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcgccgaaggtaagttgaagactcatgatgaaccctgttctatcgctccagatgacaaacatgaactcatataagcgccatgttcgcaccttccTTAGt > 8:111982‑M2/145‑149 (MQ=255) caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGtt < 2:209571‑M2/6‑1 (MQ=255) aaTTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGgg < 8:437592‑M2/148‑3 (MQ=255) ttAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaa < 8:251718‑M2/149‑13 (MQ=255) tAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCGCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaa > 1:402747‑M2/1‑136 (MQ=255) ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct > 2:153146‑M2/132‑132 (MQ=255) ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGcc > 5:108046‑M2/132‑148 (MQ=255) ttGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTATGTTAGggaaggtgcgaataag < 1:69229‑M2/149‑17 (MQ=255) taAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcgggg > 4:338323‑M2/1‑128 (MQ=255) ttgtattgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaat > 2:278250‑M2/1‑124 (MQ=255) ttgtattgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaat < 3:19568‑M2/149‑26 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGt > 3:31143‑M2/120‑149 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagaagacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTaa < 3:372006‑M2/28‑1 (MQ=255) ttgtaCTCACGAGGCAAAGATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaat < 5:487984‑M2/144‑26 (MQ=255) ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAAc < 5:394752‑M2/40‑1 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCtaa > 8:477908‑M2/109‑142 (MQ=255) aCGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctga > 7:1462‑M2/1‑111 (MQ=255) gAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact < 4:28905‑M2/149‑41 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACAcc > 6:222083‑M2/104‑149 (MQ=255) aaaaaTAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt < 5:275800‑M2/148‑45 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAAt > 6:65656‑M2/99‑149 (MQ=255) ataatGTCATCCCTTTCAGTAAGACATTCATAACATCCTGCTCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt > 4:124807‑M2/1‑100 (MQ=255) atGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 3:420518‑M2/1‑97 (MQ=255) tGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt < 1:330065‑M2/149‑54 (MQ=255) tCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag < 6:5457‑M2/134‑44 (MQ=255) aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGc < 7:393228‑M2/62‑1 (MQ=255) cTTTCCGTAAGACATTCATAACATCCTGAGCCGGGGATTTATAAACATTATCTTTACTCATAAGAATCGACACCGCTTTTGCTGTTACggaaggtgcgaataagcggggaaatccttctcggctgactcagtcatttcatttcttcatg > 4:298399‑M2/1‑88 (MQ=255) tttCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 4:72170‑M2/149‑63 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAg < 2:255719‑M2/67‑1 (MQ=255) aGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 8:194838‑M2/147‑65 (MQ=255) aGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt < 8:393056‑M2/127‑45 (MQ=255) aGTAAGACATTCATAACATCCTGATCAGGGTAGTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattctactcggctgactcagtcatttcatttcttcatgtttga > 1:248381‑M2/1‑83 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgaaaaacatgatctcatatcagggaattgttagcaaattccTTAGTTTTTCGTCAGCCAATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAAt > 7:355178‑M2/79‑149 (MQ=255) tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTc < 6:128524‑M2/73‑1 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTaa < 7:298625‑M2/54‑1 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGAt > 5:6098‑M2/71‑148 (MQ=255) tCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt < 7:198162‑M2/149‑77 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGa > 1:150682‑M2/68‑149 (MQ=255) aTAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGCCAACGCTTTTTCTGTTAGggaaggtgagaataagcggggaaattcttctcggatgactcattcatttcatttgttcatgtttgagcagatgttttc < 2:395261‑M2/149‑79 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGa > 6:333435‑M2/67‑148 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGa > 8:504110‑M2/67‑148 (MQ=255) aaCATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 7:320265‑M2/149‑81 (MQ=255) aaCATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 1:310625‑M2/149‑81 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAAcc > 6:410826‑M2/63‑149 (MQ=255) aTCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg > 7:194838‑M2/1‑66 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCt < 5:333435‑M2/88‑1 (MQ=255) aTCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat > 4:22201‑M2/1‑60 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTa < 1:212213‑M2/27‑1 (MQ=255) gggTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt > 6:486970‑M2/1‑56 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCAttttttt < 3:163910‑M2/26‑1 (MQ=255) tATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 5:361888‑M2/1‑53 (MQ=255) tttATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 1:488683‑M2/1‑51 (MQ=255) taAATATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc > 2:36318‑M2/1‑47 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCCAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGc < 5:196695‑M2/107‑1 (MQ=255) aaCATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta > 2:310625‑M2/1‑45 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTaa < 4:198126‑M2/28‑1 (MQ=255) tCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcctctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga > 6:14617‑M2/1‑38 (MQ=255) atgatctcatatcagtgtcttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTc < 8:222363‑M2/115‑1 (MQ=255) atctcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCaa < 5:410826‑M2/117‑1 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTaa < 6:95895‑M2/28‑1 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTaa > 5:95895‑M2/29‑56 (MQ=255) cTCATAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga < 1:352673‑M2/127‑96 (MQ=255) atatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCt < 7:489942‑M2/122‑1 (MQ=255) tatcagggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCttt < 2:332529‑M2/124‑1 (MQ=255) aTAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc < 8:298036‑M2/149‑121 (MQ=255) aTAAGAATAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 8:310117‑M2/146‑118 (MQ=255) gggacttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTaacaa < 4:38049‑M2/129‑1 (MQ=255) tAGACAACGCTTTTTCTGTTATggaatgttcgaataacagggaaaattcttctctgctgacgcagtcatatcatttcttcatttttgagacgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt > 2:179773‑M2/1‑22 (MQ=255) tAGACAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt < 5:245327‑M2/148‑127 (MQ=255) ttgttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAAcag > 5:463609‑M2/16‑147 (MQ=255) aCAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa > 4:425962‑M2/1‑19 (MQ=255) cAACGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg < 7:264543‑M2/149‑132 (MQ=255) gttcgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGACTTTTCTTGCATTGGCTCAACATCTTTAACAAcagcag < 6:197092‑M2/135‑1 (MQ=255) aaCGCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc > 4:182723‑M2/1‑17 (MQ=255) gCTTTTTCTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt < 3:89471‑M2/120‑107 (MQ=255) cgcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCtt > 1:108683‑M2/11‑110 (MQ=255) gcaccttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAAcagcag < 3:202308‑M2/135‑1 (MQ=255) tttCTGTTAGggaaggggccaataagcgggcaaattcttctcggctgactcagtcatttcctttcttcatggttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc > 2:125504‑M2/1‑10 (MQ=255) ttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATa < 8:157185‑M2/93‑1 (MQ=255) ttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGc < 2:421415‑M2/113‑1 (MQ=255) ttccTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGc > 1:421415‑M2/5‑117 (MQ=255) cTGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt < 6:275887‑M2/126‑120 (MQ=255) tGTTAGggaaggtgcgaataagcggggaaattcttctgggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag < 1:178582‑M2/149‑144 (MQ=255) tGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa > 3:277106‑M2/1‑6 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccatttcttcgccatttaaggcgttatccccag > 7:436799‑M2/1‑5 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 5:451527‑M2/1‑5 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt < 1:225720‑M2/149‑146 (MQ=255) | TCTTTTAATTCACTTTTAATTGTATAAATTGTATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATAAACATTATCTTTACTCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTT > NC_000913/3801263‑3801559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |