| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 168,640 | IS2 (+) +5 bp | coding (1157‑1161/2244 nt) | fhuA → | ferrichrome outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 168640 = | 0 (0.000) | 33 (1.140) | 30/252 | 0.1 | 100% | coding (1157/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 168644 | 0 (0.000) | 32 (1.120) | 30/250 | 0.1 | 100% | coding (1161/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
AAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATC > NC_000913/168498‑168786 | aaaacCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAAc > 8:48/1‑147 (MQ=255) ccTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagact < 7:48‑M1/149‑7 (MQ=255) tCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactgg > 6:36681‑M1/1‑141 (MQ=255) cGCAAAACAGCGTTTATGGTTACGGAGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggc > 7:110067‑M1/1‑140 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATa < 4:74684‑M1/18‑1 (MQ=255) tttATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCTAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctc < 7:73269‑M1/149‑22 (MQ=255) ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTg < 2:100009‑M1/26‑1 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGAt > 6:107667‑M1/118‑134 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGAt < 5:107667‑M1/17‑1 (MQ=255) aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGc < 4:27979‑M1/32‑1 (MQ=255) ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCa > 1:75532‑M1/110‑137 (MQ=255) ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCa < 2:75532‑M1/28‑1 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc > 2:141891‑M1/109‑148 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc > 2:143927‑M1/109‑148 (MQ=255) tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc < 4:7762‑M1/40‑1 (MQ=255) tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc > 3:7762‑M1/106‑145 (MQ=255) cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTg > 3:74684‑M1/104‑148 (MQ=255) ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGAc < 5:30330‑M1/56‑1 (MQ=255) ttACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt > 1:76922‑M1/1‑91 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCg > 6:28656‑M1/82‑129 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCg < 5:28656‑M1/48‑1 (MQ=255) tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGa < 4:6451‑M1/69‑1 (MQ=255) cAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac > 3:122386‑M1/1‑85 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCg > 3:6451‑M1/78‑149 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCgg < 4:40127‑M1/73‑1 (MQ=255) ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTc > 6:30330‑M1/73‑149 (MQ=255) tgCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag < 2:76922‑M1/148‑73 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGAc > 1:68605‑M1/70‑149 (MQ=255) tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACt > 1:100009‑M1/69‑149 (MQ=255) aTTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 2:128586‑M1/1‑70 (MQ=255) aggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaACAACTGCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTtatgc > 7:119561‑M1/63‑149 (MQ=255) gcgcCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 5:36681‑M1/149‑84 (MQ=255) cGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 1:128586‑M1/149‑91 (MQ=255) gATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga < 4:122386‑M1/149‑93 (MQ=255) tAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGATGCAAAACtagactggacacctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat > 3:54508‑M1/1‑55 (MQ=255) ccATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 3:91247‑M1/1‑49 (MQ=255) ccATTATCTGGCAAGTAAATACGTTGTTGATGATGAGAAGCTGCAAAACtagacttgccgcctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat < 4:54508‑M1/149‑101 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAAc > 3:40127‑M1/43‑149 (MQ=255) tCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagtctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt < 8:110067‑M1/148‑106 (MQ=255) ggCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg > 8:12001‑M1/1‑40 (MQ=255) gCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggc > 2:155113‑M1/1‑39 (MQ=255) aacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt > 8:105759‑M1/33‑130 (MQ=255) aacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt < 7:105759‑M1/98‑1 (MQ=255) tAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga < 2:76872‑M1/148‑115 (MQ=255) tAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg > 1:76872‑M1/1‑34 (MQ=255) gtcgtTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg > 7:118428‑M1/1‑27 (MQ=255) gtTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcaga < 7:12001‑M1/148‑125 (MQ=255) ttGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt < 8:104585‑M1/93‑71 (MQ=255) atataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTta > 4:88976‑M1/18‑101 (MQ=255) atataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTta < 3:88976‑M1/84‑1 (MQ=255) gatgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc > 7:109012‑M1/1‑21 (MQ=255) gatgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc > 7:30130‑M1/1‑21 (MQ=255) atgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc < 8:118428‑M1/148‑129 (MQ=255) gatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttaagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta > 5:130628‑M1/1‑18 (MQ=255) ggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt > 1:41685‑M1/13‑110 (MQ=255) ggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt < 2:41685‑M1/98‑1 (MQ=255) atgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta < 4:91247‑M1/148‑132 (MQ=255) gagaAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca > 1:47809‑M1/1‑15 (MQ=255) gaAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca > 1:92042‑M1/1‑13 (MQ=255) ccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggt < 8:105166‑M1/114‑1 (MQ=255) ccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggt > 7:105166‑M1/4‑117 (MQ=255) caAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCt > 7:39242‑M1/3‑144 (MQ=255) caAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCt < 8:39242‑M1/142‑1 (MQ=255) cAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa < 8:30130‑M1/148‑143 (MQ=255) aaaaCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa > 6:21688‑M1/1‑5 (MQ=255) ctagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa > 8:101774‑M1/1‑1 (MQ=255) | AAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATC > NC_000913/168498‑168786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |