| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3780085 | 33 (1.140) | 4 (0.150) | 4/234 | 3.2 | 13.2% | coding (259/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked |
| ? | NC_000913 | = 3780114 | 22 (0.820) | coding (288/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCAGCGTATTCTGAAAAACATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTA > NC_000913/3779969‑3780241 | gcCAGCGTATTCTGAAAAACATTTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGAGGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGAc < 8:101051/149‑1 (MQ=255) cAGCGTATTCTGAAAAACATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGAcgc < 1:121292/149‑1 (MQ=255) cATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTa < 2:96840/149‑1 (MQ=255) tCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCAt > 1:96409/1‑132 (MQ=255) tCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCAt < 2:96409/132‑1 (MQ=255) cGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTAc < 1:85637/144‑1 (MQ=255) cGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTAc > 2:85637/1‑144 (MQ=255) aaGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACg < 8:11139/148‑1 (MQ=255) aaGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACg > 7:11139/1‑148 (MQ=255) tGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTActc > 1:143766/1‑135 (MQ=255) tGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTActc < 2:143766/135‑1 (MQ=255) tGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTcc > 1:15933/1‑149 (MQ=255) tAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaa < 2:15933/148‑1 (MQ=255) tGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaag < 6:106362/146‑1 (MQ=255) tGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaag > 5:106362/1‑146 (MQ=255) agaAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCAt > 5:37786/1‑98 (MQ=255) agaAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCAt < 6:37786/98‑1 (MQ=255) aTGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaag > 1:59554/1‑133 (MQ=255) aTGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaag < 2:59554/133‑1 (MQ=255) aCTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTcc < 4:123772/106‑1 (MQ=255) aCTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTcc > 3:123772/1‑106 (MQ=255) aCTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCaa > 1:71259/1‑149 (MQ=255) tttGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCttt < 2:71259/149‑1 (MQ=255) tATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaa > 5:22342/1‑93 (MQ=255) tATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTgaa < 6:22342/93‑1 (MQ=255) gAAGTTCAGGCAGCCAAAGCGGCGGACGCGCAGCGTATTCCGTTTACTCTCTCGACGGTTTCCGTTAGCCCGAGTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCg > 4:73561/1‑149 (MQ=255) gCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTa > 5:63915/1‑142 (MQ=255) gCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTa < 6:63915/142‑1 (MQ=255) | GCCAGCGTATTCTGAAAAACATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTA > NC_000913/3779969‑3780241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |