| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,290,476 | IS3 (–) +3 bp | coding (235‑237/1014 nt) | rssB → | PcnB‑degradosome interaction factor; response regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1094245 = | NA (NA) | 13 (0.450) | 12/252 | 1.4 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 1290478 | 0 (0.000) | coding (237/1014 nt) | rssB | PcnB‑degradosome interaction factor; response regulator | |||||
| * | ? | NC_000913 | = 1095502 | NA (NA) | 44 (1.520) | 34/252 | 0.1 | 100% | noncoding (1/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | 1290476 = | 0 (0.000) | coding (235/1014 nt) | rssB | PcnB‑degradosome interaction factor; response regulator | |||||
TGGGAGCGACAACGGTACTGGCGGCTGATGGGGTGGATGCCCTTGAGTTGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGTCT > NC_000913/1290330‑1290612 | agcaagcttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaca < 2:33352‑M2/2‑1 (MQ=255) ggcttcacttcgaaattcaggctaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgaggcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTg < 8:75175‑M2/15‑1 (MQ=255) tgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATc > 1:149766‑M2/127‑149 (MQ=255) cgaaattcaggcgaatgctgtttacgggggtttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCt < 3:81358‑M2/24‑1 (MQ=255) gaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGc > 6:132207‑M2/124‑149 (MQ=255) tGGGGTGGATGCCCTTGAGTTGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacag > 2:85586‑M2/1‑121 (MQ=255) gcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGaaaa > 6:55886‑M2/115‑149 (MQ=255) atgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATg < 5:55886‑M2/39‑1 (MQ=255) acggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCGCTGAAAATATGGCAGATAtt > 7:30445‑M2/102‑149 (MQ=255) ttGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcc > 6:103189‑M2/1‑102 (MQ=255) ttGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcc < 5:103189‑M2/108‑7 (MQ=255) tGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAg < 8:47837/98‑1 (MQ=255) tGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAg > 7:47837/1‑98 (MQ=255) tGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatat > 8:94749‑M2/1‑98 (MQ=255) tGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatat < 7:94749‑M2/118‑21 (MQ=255) actggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCGCTGAAAATATGGCAGATATTGCCAAAGCGtt < 8:30445‑M2/59‑1 (MQ=255) gttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTg > 4:93822‑M2/86‑134 (MQ=255) gttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTg < 3:93822‑M2/49‑1 (MQ=255) gttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTc > 2:125497‑M2/86‑149 (MQ=255) cACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaa < 2:58817‑M2/122‑35 (MQ=255) cACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaa > 1:58817‑M2/1‑88 (MQ=255) tgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtatgatcac > 1:19350‑M2/78‑78 (MQ=255) tgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtatgatcac < 2:19350‑M2/1‑1 (MQ=255) tgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTgg > 6:41354‑M2/78‑144 (MQ=255) tgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTgg < 5:41354‑M2/67‑1 (MQ=255) tttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg > 8:33754‑M2/76‑115 (MQ=255) tcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGt > 4:38607‑M2/70‑149 (MQ=255) tgtgATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgag > 2:43644‑M2/1‑69 (MQ=255) tgtgATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgag < 1:43644‑M2/138‑70 (MQ=255) tgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTg < 5:132207‑M2/84‑1 (MQ=255) gtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTg > 2:101998‑M2/62‑148 (MQ=255) gtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTg > 2:99799‑M2/62‑148 (MQ=255) tgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGt > 2:148739‑M2/54‑133 (MQ=255) tgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGt < 1:148739‑M2/80‑1 (MQ=255) tgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTa > 8:6430‑M2/50‑146 (MQ=255) aaTGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttctt > 5:21307‑M2/1‑49 (MQ=255) aaTGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttctt < 6:21307‑M2/94‑46 (MQ=255) gtttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCt > 7:9610‑M2/45‑148 (MQ=255) tttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGa < 1:101998‑M2/106‑1 (MQ=255) tttactcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGa < 1:99799‑M2/106‑1 (MQ=255) actcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg > 2:152127‑M2/41‑80 (MQ=255) actcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg < 1:154322‑M2/40‑1 (MQ=255) actcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg < 1:152127‑M2/40‑1 (MQ=255) actcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg > 2:154322‑M2/41‑80 (MQ=255) tcacttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGc > 1:59808‑M2/39‑149 (MQ=255) acttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGc < 1:125497‑M2/111‑1 (MQ=255) ttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGa > 5:79590‑M2/35‑140 (MQ=255) ttagccgcgtgtccactattgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGa < 6:79590‑M2/106‑1 (MQ=255) ttgctgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGc < 2:59808‑M2/131‑1 (MQ=255) tgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTAc < 1:50831‑M2/61‑1 (MQ=255) tgggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTAc > 2:50831‑M2/13‑73 (MQ=255) ggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGtct < 2:149766‑M2/137‑1 (MQ=255) ggtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGtct < 3:38607‑M2/137‑1 (MQ=255) gtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGc > 6:26028‑M2/10‑120 (MQ=255) gtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGc < 5:26028‑M2/111‑1 (MQ=255) gtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGttt > 7:5958‑M2/10‑136 (MQ=255) gtaagatcaCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGttt < 8:5958‑M2/127‑1 (MQ=255) agagGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttctt > 2:10238‑M2/1‑12 (MQ=255) agagGCGACCAGtgatcctacccacgtaatatggacacaggcctaagcgaggttctt < 1:10238‑M2/57‑46 (MQ=255) | TGGGAGCGACAACGGTACTGGCGGCTGATGGGGTGGATGCCCTTGAGTTGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGTCT > NC_000913/1290330‑1290612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |