| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 168,628 | IS2 (+) +5 bp | coding (1145‑1149/2244 nt) | fhuA → | ferrichrome outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 168628 = | 3 (0.120) | 20 (0.790) | 18/256 | 0.5 | 86.5% | coding (1145/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 168632 | 3 (0.120) | 26 (1.030) | 24/256 | 0.2 | 89.3% | coding (1149/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | 381260 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
TGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCA > NC_000913/168488‑168776 | tGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAg < 6:24123/148‑1 (MQ=255) gAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactgg > 1:132725‑M1/1‑141 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGc > 5:49841‑M1/137‑148 (MQ=255) aacCTCGCAAAACAGCGTTTATGGTTACGGCGTCGGCTCCGATCCGGCGAATGCTTACAGCAAACAGGGTGCGGCATTAGCGCCAGCGGATACAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctga < 7:73049‑M1/149‑17 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTcc < 8:4694‑M1/23‑1 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTcc > 7:4694‑M1/126‑148 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatggggtaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTg < 2:128057‑M1/38‑1 (MQ=255) tGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCag < 5:76641/148‑1 (MQ=255) cGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctcca > 6:114297‑M1/1‑106 (MQ=255) cGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctcca < 5:114297‑M1/129‑24 (MQ=255) gTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataag < 2:132725‑M1/149‑48 (MQ=255) cTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaat > 4:1234‑M1/1‑97 (MQ=255) cTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaat < 3:1234‑M1/141‑45 (MQ=255) tCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 4:66466‑M1/1‑96 (MQ=255) cGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat < 3:66466‑M1/149‑61 (MQ=255) ttACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt > 7:62459‑M1/1‑79 (MQ=255) cAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta > 5:75005‑M1/1‑76 (MQ=255) cAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta < 6:75005‑M1/134‑59 (MQ=255) cAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta > 4:35452‑M1/1‑73 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCaa < 4:33412‑M1/46‑1 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCaa > 3:33412‑M1/66‑111 (MQ=255) aCAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:52994‑M1/1‑70 (MQ=255) gtgtGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt < 1:132943‑M1/149‑83 (MQ=255) tgCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga < 3:35452‑M1/149‑86 (MQ=255) gCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttatt > 3:77521‑M1/1‑63 (MQ=255) gCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttatt < 4:77521‑M1/106‑44 (MQ=255) cGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat > 1:107050‑M1/1‑62 (MQ=255) cGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat < 2:107050‑M1/122‑61 (MQ=255) aTTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag < 2:52994‑M1/149‑92 (MQ=255) ggATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGACGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga > 4:39290‑M1/1‑46 (MQ=255) ggATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGACGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga < 3:39290‑M1/141‑96 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt > 1:128057‑M1/39‑148 (MQ=255) aaaGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttag > 1:36613‑M1/1‑42 (MQ=255) aacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGttt > 2:129417‑M1/33‑82 (MQ=255) aacagatgtctggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGttt < 1:129417‑M1/50‑1 (MQ=255) cATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCAGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCaa > 4:49956/1‑149 (MQ=255) tggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggtt < 4:77787‑M1/127‑1 (MQ=255) ggaaatataggggcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCagag < 8:7774‑M1/43‑1 (MQ=255) gcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGa > 4:23470‑M1/10‑70 (MQ=255) gcaaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGa < 3:23470‑M1/61‑1 (MQ=255) aaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggtttg > 7:46564‑M1/8‑136 (MQ=255) aaatccaATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggtttg < 8:46564‑M1/129‑1 (MQ=255) ttGATGATGAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacaca < 8:62459‑M1/149‑139 (MQ=255) aATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTTTGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTacgac > 2:12933‑M1/2‑138 (MQ=255) aATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTTTGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTacgac < 1:12933‑M1/137‑1 (MQ=255) aATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggtttggt > 4:48079‑M1/2‑132 (MQ=255) aATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggtttggt < 3:48079‑M1/131‑1 (MQ=255) atgaGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCa < 3:77787/149‑1 (MQ=255) aGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacttggttttagactagtcattggagaacagatgattgatgtcttagggccggagaaaagcagaatgcgtacaacacaggaa > 7:27284‑M1/1‑2 (MQ=255) | TGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCA > NC_000913/168488‑168776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |