New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 230483929 (0.320)9 (0.100)
+C
5/282 11.2 23.8% noncoding (423/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2305105 NA (NA)intergenic (+712/+3) eco/mqo ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
Rejected: Coverage evenness skew score above cutoff.

CCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGC  >  NC_000913/2304691‑2304942
                                                                                                                                                    |                                                                                                       
ccGTTTGCCTGACGCGACGCTGGCGCGTCTTATCATGCCTACACCGCTGTGAAGTGCCCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAg                                                                                                         <  2:332575/149‑1 (MQ=255)
 cGGTTGCCCGATGCGCCGCTGGCGCGTCTTAGCATCCCTACACCCCTTTGACGAGCTCCACCCCCTCTGTCTGACAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                                                                        <  6:87884/149‑1 (MQ=11)
   gTTGCCTGTTTCCATGCTGGCGGGTCTTATGAGGTCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTTTGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  6:28460/149‑1 (MQ=14)
   gTTGCCTCTTTCGATTCTGGAGTGTCTTATGATGTCTACACCGCTGTTATGTGCGGGACCCCGTAGGTTTGATAAGGCGGTTACGCCGCATCCTACATCCAACGTCCGTGACGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  6:28462/149‑1 (MQ=11)
          gaggCGACGCTGGCGCGGCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTGGGATAAGGCGGGTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCg                                                                                               <  5:323373/146‑1 (MQ=11)
                 ctcTGGCTCGTATTATCAGTCCTTCACCGCTGAGAAGTGCCCCACCCCTTATGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                                                                        <  2:307409/147‑1 (MQ=14)
                 cgattgcgcGTCTTATCAGGCCTACACGTCTGTGAAGTGCTCTACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                                                                        <  4:178816/144‑1 (MQ=255)
                       cgcgTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGAAGGATAAGGCGGTTACGCCGCATCCGACATCAAACGACCGAGCCGGTTGCCTGATGCGACGCTGGCGCGCCGAATCTGGCCGTCACCGCTAACAAGTGCTc                                                                                  >  2:343008/1‑149 (MQ=11)
                                  aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  8:293193/118‑1 (MQ=255)
                                  aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      >  7:293193/1‑118 (MQ=255)
                                                           cACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGGCAGCGAACGTACGAGAAGGTTGCCTGATGAGACGGTGGAGCGTCTTGTCAGGCCTACAGAGCTGTGAAGTGCTCCACCCCGTAGGTGGGATAAGGCGGTTAcgcgggcgg                                              >  2:30916/1‑143 (MQ=11)
                                                           cACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTAATATCAGGCCTACACCACTGTGAAGTGCTACCCCCAGTAGTTCGGATAAGGCGGTTACGCCGCATc                                              >  2:93024/1‑149 (MQ=14)
                                                              cccGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGGTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGa                                           <  2:75855/149‑1 (MQ=255)
                                                                 gTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                                                  >  6:225440/1‑123 (MQ=255)
                                                                 gTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                                                  <  5:225440/123‑1 (MQ=255)
                                                                      ttGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAAc                                   >  2:131600/1‑149 (MQ=39)
                                                                             aGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCg                                                                                               >  2:174260/1‑82 (MQ=38)
                                                                               gCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCCTCCGCAAGCTAACGCCCAAGcc                          >  1:226260/1‑149 (MQ=11)
                                                                                           actCCGCCCTCCAACGTCCGAGCCGGTTGCCTGATGCTACGATTCCTCTTCTTATCAGGCCTACACCGATGAGAATTGCTCACCCCCGTAGGTCGGATCAGGCGGTTACGACGAATCCGACATCTAACGCCCAAGCCGGTTGCCTGATg              <  4:227479/147‑1 (MQ=11)
                                                                                             tCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGATGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCGACGCCGGTTGCCGGCTGct            >  3:227479/1‑148 (MQ=11)
                                                                                                gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCCGGCGTACACCGCGGGGAATTGCGCCCCCGCGTAGGTGGGATAAGGCGGTTACGCCGCATCCGACATCTAAAGACCCAGCCGGTTGCCTGATGCGACg         >  1:100092/1‑149 (MQ=11)
                                                                                                gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACg         >  4:261579/1‑149 (MQ=32)
                                                                                                gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCAATCCACCCATCAGACGTGCTAACCCCCGTCGGTCGGATAAGGCGGTTACGCAGCATCCGAGATCAGACTCCCTAGCCGTATGCCTGATGCGACg         >  2:352008/1‑149 (MQ=2)
                                                                                                    tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCT‑‑‑CCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTACCGCCCACGCCGGTAGACTGATGCGACGCTGgcgc  >  5:234208/1‑149 (MQ=11)
                                                                                                      cAACGTCCGCGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgc    <  1:93024/148‑1 (MQ=17)
                                                                                                      cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                          <  7:167763/94‑1 (MQ=33)
                                                                                                      cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                          >  8:167763/1‑94 (MQ=33)
                                                                                                      cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgcg   >  6:129885/1‑149 (MQ=32)
                                                                                                       aaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCCCCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgcgc  >  3:322720/1‑149 (MQ=17)
                                                                                                       aaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATAAGGCCTACCCCGCTGGGCAGTGCTCCGCCCCGTAGGTCGGATACGGCGGGGACGCCGCCGCCGACATCTAACGCCCCAGCCGGTTGCCTGATGCGACGCTGgcgc  >  5:350402/1‑149 (MQ=11)
                                                                                                                                                    |                                                                                                       
CCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGC  >  NC_000913/2304691‑2304942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.