| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description | 
| RA | NC_000913 | 4,287,423 | G→C | intergenic (‑52/‑341) | acs ← / → nrfA | acetyl‑CoA synthetase/nitrite reductase, formate‑dependent, cytochrome | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,287,423 | 0 | G | C | 99.0% | 362.3 / NA | 101 | intergenic (‑52/‑341) | acs/nrfA | acetyl‑CoA synthetase/nitrite reductase, formate‑dependent, cytochrome | 
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base C (54/45); minor base A (1/0); total (55/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
| ATAGATTGTTGATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATGTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTT  >  NC_000913/4287277‑4287567                                                                                                                                                  |                                                                                                                                                aTAGATTGTTGATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGATTTTGGCTCATGCTTTTTTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTa                                                                                                                                                >  5:302000/1‑149 (MQ=255)   gcttgttgATAGAGCGCCTCGTACTGCTGACGGTTTATCAGGCCAAGGTGTGCGATGTTGGCAGGAATGGTGTGTGTGTTAATTTGGCTCATGCTTTTTTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgg                                                                                                                                              <  8:286141/146‑1 (MQ=255)   gATTGTTGATACATCGCCTAGTACTGCTGATGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgg                                                                                                                                              <  2:137310/148‑1 (MQ=255)    aTTGTTGATACATCGGCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAggg                                                                                                                                             <  2:224573/148‑1 (MQ=255)    aTTGTTGATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgggg                                                                                                                                            >  3:21018/1‑149 (MQ=255)     ttgttgATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgggg                                                                                                                                            >  1:296181/1‑148 (MQ=255)        ttgATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTAtt                                                                                                                                        >  4:151951/1‑149 (MQ=255)          gATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTgg                                                                                                                                      >  7:294304/1‑149 (MQ=255)              cATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGt                                                                                                                                  <  1:355671/149‑1 (MQ=255)               aTCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGtt                                                                                                                                 >  2:235136/1‑149 (MQ=255)               aTCGCCTCGGACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTATCCTTGGAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGtt                                                                                                                                 >  8:358135/1‑149 (MQ=255)                   ccTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGTGTATTGGCAGTTTTGt                                                                                                                             >  1:296390/1‑149 (MQ=255)                    cTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGtt                                                                                                                            <  4:21018/149‑1 (MQ=255)                       gTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          <  1:85500/148‑1 (MQ=255)                       gTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          <  7:354157/148‑1 (MQ=255)                           tgctgAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          >  5:263462/1‑144 (MQ=255)                           tgctgAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          <  6:263462/144‑1 (MQ=255)                             ctgAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTAttt                                                                                                                    <  3:155335/148‑1 (MQ=255)                             ctgAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTg                                                                                                                   >  5:151364/1‑149 (MQ=255)                              tgAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTgg                                                                                                                  >  3:43117/1‑149 (MQ=255)                               gAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTggg                                                                                                                 >  2:139572/1‑149 (MQ=255)                                aGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          <  2:322254/139‑1 (MQ=255)                                aGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTa                                                                                                                          >  1:322254/1‑139 (MQ=255)                                aGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGc                                                                                                                >  5:331791/1‑149 (MQ=255)                                  ggTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGa                                                                                                              >  7:305045/1‑149 (MQ=255)                                  ggTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGa                                                                                                              >  2:146537/1‑149 (MQ=255)                                  ggTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGa                                                                                                              >  8:47711/1‑149 (MQ=255)                                   gTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTTTTTGTGAATTTGGCTGATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGAc                                                                                                             <  2:234404/149‑1 (MQ=255)                                   gTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGAc                                                                                                             <  2:296181/149‑1 (MQ=255)                                    tttATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTTAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGtt                                                                                                                            >  5:254247/1‑133 (MQ=255)                                    tttATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGtt                                                                                                                            <  6:254247/133‑1 (MQ=255)                                    tttATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGa                                                                                                              >  6:13723/1‑147 (MQ=255)                                    tttATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACa                                                                                                            <  3:235821/149‑1 (MQ=255)                                       aTCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGa                                                                                                              >  6:137599/1‑144 (MQ=255)                                        tCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGAt                                                                                                         <  1:235136/148‑1 (MQ=255)                                          aGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCAc                                                                                                      >  4:232566/1‑149 (MQ=255)                                          aGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGT‑GGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACg                                                                                                     >  3:97218/1‑149 (MQ=255)                                           ggCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACg                                                                                                     >  7:253265/1‑149 (MQ=255)                                              aaCGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCa                                                                                                   >  7:377760/1‑148 (MQ=255)                                                 ggTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAg                                                                                               >  2:17316/1‑149 (MQ=255)                                                 ggTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAg                                                                                               <  5:303064/149‑1 (MQ=255)                                                   tCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTa                                                                                             <  3:151951/149‑1 (MQ=255)                                                     tGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAg                                                                                            >  5:270807/1‑148 (MQ=255)                                                      gCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgg                                                                                                                                              >  5:199622/1‑97 (MQ=255)                                                      gCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAgg                                                                                                                                              <  6:199622/97‑1 (MQ=255)                                                       cGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGaa                                                                                          <  5:13723/148‑1 (MQ=255)                                                         aTGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATtg                                                                                       >  6:110765/1‑149 (MQ=255)                                                            ttGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGT‑GGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGc                                                                                    <  4:97218/148‑1 (MQ=255)                                                             tGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAATTGTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGc                                                                                    <  7:97280/148‑1 (MQ=255)                                                                  ggAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATa                                                                               >  5:50239/1‑148 (MQ=255)                                                                  ggAATGGTGTGTTTGTGAATTTCGCTCATGCTTTTGATCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATa                                                                               >  4:330318/1‑148 (MQ=255)                                                                        gtgtgtTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCa                                                                        <  3:232566/149‑1 (MQ=255)                                                                           tgtTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAggg                                                                     >  6:176358/1‑149 (MQ=255)                                                                                gtgAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAAtt                                                                >  3:343685/1‑149 (MQ=255)                                                                                gtgAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAAtt                                                                >  3:231455/1‑149 (MQ=255)                                                                                  gAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGGTAAATCTAGGGGTATTGGCAGTTATGTTTAGTATTTGGGCGACAGATCACGCAAAAGTATAATTGTGCAAATAAACTGCAGGGTAAtttt                                                              >  8:303801/1‑149 (MQ=255)                                                                                   aaTTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAAttttt                                                             <  4:231455/149‑1 (MQ=255)                                                                                     tttGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTg                                                            >  8:296181/1‑148 (MQ=255)                                                                                       tGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGaa                                                          <  6:331791/148‑1 (MQ=255)                                                                                        ggcgcctGCTTTTGTTCTCCTTGTAGGCTTGTAATAATATGTGGCATACGCGTTAACTCTAGGGGGATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAg                                                         <  5:374988/142‑1 (MQ=255)                                                                                         gCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGt                                                       <  8:294304/149‑1 (MQ=255)                                                                                             aTGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATATAGGGGTATTGGCAGTTTTTTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAg                                                    >  3:116699/1‑148 (MQ=255)                                                                                                         tcCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGGTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGa                                       >  2:221277/1‑149 (MQ=255)                                                                                                           cTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTg                                        <  8:253265/146‑1 (MQ=255)                                                                                                           cTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGAtt                                     <  7:47711/149‑1 (MQ=255)                                                                                                           cTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGAt                                      <  6:151364/148‑1 (MQ=255)                                                                                                            ttGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGAtt                                     >  5:119846/1‑148 (MQ=255)                                                                                                              gTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAAt                                  >  6:12560/1‑149 (MQ=255)                                                                                                              gTAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAAt                                  >  1:391978/1‑149 (MQ=255)                                                                                                               tAGGATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAAtt                                 <  7:8746/149‑1 (MQ=255)                                                                                                                 ggATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCt                               <  4:343685/149‑1 (MQ=255)                                                                                                                  gATGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCtt                              >  5:71602/1‑149 (MQ=255)                                                                                                                   aTGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCttt                             <  3:330318/149‑1 (MQ=255)                                                                                                                   aTGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCttt                             <  7:358135/149‑1 (MQ=255)                                                                                                                    tGTTAATTATATGTGGTATACGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTTGAATTGTTCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAACGTTGATTAATTCTTTg                            <  6:302000/149‑1 (MQ=255)                                                                                                                    tGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTg                            <  4:3100/149‑1 (MQ=255)                                                                                                                    tGTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTg                            <  7:65678/149‑1 (MQ=255)                                                                                                                     gTTAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCttt                             >  1:205636/1‑147 (MQ=255)                                                                                                                      ttAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGAt                                      <  3:53726/137‑1 (MQ=255)                                                                                                                      ttAATAATATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGAt                                      >  4:53726/1‑137 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGt                                          <  6:268872/131‑1 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGt                                          >  5:268872/1‑131 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGa                           <  6:212736/146‑1 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGa                           >  5:212736/1‑146 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAgg                         >  6:41497/1‑148 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAgg                         >  8:60810/1‑148 (MQ=255)                                                                                                                        aataatATGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAgg                         <  5:75240/148‑1 (MQ=255)                                                                                                                         ataataTGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGa                        <  1:17316/148‑1 (MQ=255)                                                                                                                            atatGTGGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATACTTTg                            <  7:95803/141‑1 (MQ=255)                                                                                                                               tgtgGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATg                   >  2:56298/1‑147 (MQ=255)                                                                                                                                gtgGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAg                >  2:261882/1‑149 (MQ=255)                                                                                                                                 tgGCATTAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAATATTAGAATTGTGCAATTAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGTAACATGCAg                <  7:6657/148‑1 (MQ=255)                                                                                                                                 tgGCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGt               >  6:150748/1‑149 (MQ=255)                                                                                                                                   gCATAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGtt              <  5:12560/148‑1 (MQ=255)                                                                                                                                     aTAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAAtttt                                                              <  8:194107/98‑1 (MQ=255)                                                                                                                                     aTAAGCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAAtttt                                                              >  7:194107/1‑98 (MQ=255)                                                                                                                                         gCGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTatgcatg       >  6:194975/1‑149 (MQ=255)                                                                                                                                          cGTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTatgcatgc      <  7:296181/149‑1 (MQ=255)                                                                                                                                           gTTAAATCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCt     >  3:231447/1‑149 (MQ=255)                                                                                                                                               aaTCTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGtt  >  2:285977/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                ATAGATTGTTGATACATCGCCTCGTACTGCTGAGGGTTTATCAGGCAACGGTCTGCGATGTTGGCAGGAATGGTGTGTTTGTGAATTTGGCTCATGCTTTTGTTCTCCTTGTAGGATGTTAATAATATGTGGCATAAGCGTTAAATGTAGGGGTATTGGCAGTTTTGTTTAGTATTTGGGCGACAGATCACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTT  >  NC_000913/4287277‑4287567 | 
| Alignment Legend | 
|---|
| Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG | 
| Unaligned base: atcgMasked matching base:atcgAlignment gap:‑Deleted base:‑ |