New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 23814073 (1.970)8 (0.230) 8/218 2.6 10.3% intergenic (+20/+117) yafT/ykfM lipoprotein/lethality reduction protein, putative inner membrane protein
?NC_000913 = 238146 72 (2.110)intergenic (+26/+111) yafT/ykfM lipoprotein/lethality reduction protein, putative inner membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

TTCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAACTGCTGAATCTTCCTTGCGAG  >  NC_000913/237999‑238285
                                                                                                                                             |                                                                                                                                                 
ttCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTc                                                                                                                                            <  4:57838‑M2/149‑2 (MQ=255)
   caccaTTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctgg                                                                                                                                         >  7:68491‑M2/1‑145 (MQ=255)
     ccaTTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcg                                                                                                                                       >  6:104859‑M2/1‑143 (MQ=255)
            ccGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAACGACCTATAAAGCGATGGTAAAAGATTTGGGTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCaataa                                                                                                                                >  7:152226/1‑149 (MQ=255)
            ccGACAAGAATGAAGCCAGTAAGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCaataa                                                                                                                                >  8:172328/1‑149 (MQ=255)
                 aaGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACa                                                                                                                            >  2:155968/1‑148 (MQ=255)
                     aTGAAGCCAGTACGACTGATATGACAGAGCAGCGAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAAtt                                                                                                                       >  7:11870/1‑149 (MQ=255)
                             aGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGa                                                                                                                                                 <  3:177483/115‑1 (MQ=255)
                             aGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGa                                                                                                                                                 >  4:177483/1‑115 (MQ=255)
                                   aCTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCtt                                                                                                                    >  3:62408/1‑138 (MQ=255)
                                   aCTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCtt                                                                                                                    <  4:62408/138‑1 (MQ=255)
                                          tGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTc                                                                                                   <  5:165169/148‑1 (MQ=255)
                                          tGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCt                                                                                                  <  3:57838/149‑1 (MQ=255)
                                           gACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCaataa                                                                                                                                <  5:46560/118‑1 (MQ=255)
                                           gACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCaataa                                                                                                                                >  6:46560/1‑118 (MQ=255)
                                            aCAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatct                                                                                                >  3:31845‑M1/1‑98 (MQ=255)
                                              agagCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGAc                                                                                              <  1:155968/149‑1 (MQ=255)
                                               gagCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCCGCCGCCAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatctttt                                                                                             <  4:72784‑M1/149‑55 (MQ=255)
                                               gagCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCCGCCGCCAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttt                                                                                              >  3:72784‑M1/1‑95 (MQ=255)
                                                   agcaAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttacca                                                                                         <  4:31845‑M1/149‑59 (MQ=255)
                                                    gcaAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggc                                                                                                                                        <  6:114341‑M2/101‑6 (MQ=255)
                                                        aTCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTg                                                                                    <  5:102793/149‑1 (MQ=255)
                                                            tGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACa                                                                                       <  5:106060/142‑1 (MQ=255)
                                                            tGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACa                                                                                       >  6:106060/1‑142 (MQ=255)
                                                             gCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAg                                                                                >  1:184093/1‑148 (MQ=255)
                                                                 cTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctg                                                                                                                                          <  8:94188‑M2/86‑4 (MQ=255)
                                                                 cTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctg                                                                                                                                          >  7:94188‑M2/1‑83 (MQ=255)
                                                                 cTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCtt                                                                                                 <  7:15057/127‑1 (MQ=255)
                                                                 cTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCtt                                                                                                 >  8:15057/1‑127 (MQ=255)
                                                                  ttAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcagatataatttat                                                                                                                        >  3:104709‑M1/1‑76 (MQ=255)
                                                                  ttAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcagatataatttat                                                                                                                        <  4:104709‑M1/103‑28 (MQ=255)
                                                                    aaGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCtt                                                                                                 >  5:158061/1‑124 (MQ=255)
                                                                    aaGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCtt                                                                                                 <  6:158061/124‑1 (MQ=255)
                                                                        aaaaGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcaga                                                                                                                                  >  6:177600‑M1/1‑70 (MQ=255)
                                                                        aaaaGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGaaattcctggcggcaga                                                                                                                                  <  5:177600‑M1/87‑18 (MQ=255)
                                                                            gACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATcc                                                                >  3:79103/1‑149 (MQ=255)
                                                                             cccTCTAAAGCGATCGTAAAAGATTTGGGTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCg                                                               <  8:152226/148‑1 (MQ=255)
                                                                                 ataAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCg                                                               <  4:176549/145‑1 (MQ=255)
                                                                                 ataAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCg                                                               >  3:176549/1‑145 (MQ=255)
                                                                                  taAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGt                                                           <  2:184093/148‑1 (MQ=255)
                                                                                   aaaGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGtt                                                          >  2:158296/1‑148 (MQ=255)
                                                                                         aTGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCttt                                                                                                                   >  4:104238/1‑85 (MQ=255)
                                                                                         aTGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCttt                                                                                                                   <  3:104238/85‑1 (MQ=255)
                                                                                          tGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgct                                                  <  4:31845‑M2/149‑92 (MQ=255)
                                                                                          tGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtg                                                  >  7:139421/1‑149 (MQ=255)
                                                                                           ggTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgt                                                 >  2:3330/1‑149 (MQ=255)
                                                                                            gTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCGATAATACAAAATTCTTTGCATaa                                                                                                             >  7:53743/1‑88 (MQ=255)
                                                                                            gTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCGATAATACAAAATTCTTTGCATaa                                                                                                             <  8:53743/88‑1 (MQ=255)
                                                                                              aaaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcggcggatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgctgctc                                              <  4:72784‑M2/149‑96 (MQ=255)
                                                                                              aaaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcg                                                                                                                                       >  3:99204‑M2/1‑54 (MQ=255)
                                                                                              aaaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcg                                                                                                                                       <  4:99204‑M2/60‑7 (MQ=255)
                                                                                              aaaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACa                                                                                       <  3:133547/108‑1 (MQ=255)
                                                                                              aaaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACa                                                                                       >  4:133547/1‑108 (MQ=255)
                                                                                               aaaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcggcggatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgctgctc                                              >  3:72784‑M2/1‑53 (MQ=255)
                                                                                                aaGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgtttgtt                                            <  8:139421/149‑1 (MQ=255)
                                                                                                 aGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgctgctctgt                                           >  3:31845‑M2/1‑51 (MQ=255)
                                                                                                   aTTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTa                                         <  8:11870/149‑1 (MQ=255)
                                                                                                       ggTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGaa                                      >  6:2314/1‑148 (MQ=255)
                                                                                                        gTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgtttgt                                             >  1:43542/1‑140 (MQ=255)
                                                                                                        gTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgtttgt                                             <  2:43542/140‑1 (MQ=255)
                                                                                                         ttAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgt                                                 <  5:42726/135‑1 (MQ=255)
                                                                                                         ttAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgt                                                 >  6:42726/1‑135 (MQ=255)
                                                                                                           aaCCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgtttgtt                                            <  1:34183/138‑1 (MQ=255)
                                                                                                           aaCCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgtttgtt                                            >  2:34183/1‑138 (MQ=255)
                                                                                                            aCCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATAttt                                 <  5:2314/148‑1 (MQ=255)
                                                                                                            aCCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATAttt                                 >  8:113643/1‑148 (MQ=255)
                                                                                                             ccGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACtgt                                                 >  7:97836/1‑131 (MQ=255)
                                                                                                               gCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAatt                             <  4:79103/149‑1 (MQ=255)
                                                                                                               gCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAatt                             <  6:121316/149‑1 (MQ=255)
                                                                                                                   tCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTAttt                         <  1:3330/149‑1 (MQ=255)
                                                                                                                     aataatAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAg                                                                            <  6:164401/96‑1 (MQ=255)
                                                                                                                     aataatAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAg                                                                            >  5:164401/1‑96 (MQ=255)
                                                                                                                      ataataAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGtttt                                          >  6:20585/1‑129 (MQ=255)
                                                                                                                      ataataAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGtttt                                          <  5:20585/129‑1 (MQ=255)
                                                                                                                      ataataAATTATATCTGCCGCCAGGAATTTCTGGCAGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAAc                      >  8:29615/1‑149 (MQ=255)
                                                                                                                         ataaATTATATCTGCCGCCAGGAATTTctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaa                                                                 <  4:104709‑M2/103‑77 (MQ=255)
                                                                                                                         ataaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGaaa                                                                             >  2:47641/1‑91 (MQ=255)
                                                                                                                         ataaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGaaa                                                                             <  1:47641/91‑1 (MQ=255)
                                                                                                                         ataaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAActgc                   <  1:158296/149‑1 (MQ=255)
                                                                                                                          taaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAAtt                                                                                                       >  1:142375/1‑64 (MQ=255)
                                                                                                                          taaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAAtt                                                                                                       <  2:142375/64‑1 (MQ=255)
                                                                                                                          taaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAActgct                  >  8:119123/1‑149 (MQ=255)
                                                                                                                          taaATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAActgct                  >  8:147973/1‑149 (MQ=255)
                                                                                                                             aTTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTgtttgttt                                           >  5:157237/1‑121 (MQ=255)
                                                                                                                             aTTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTgtttgttt                                           <  6:157237/121‑1 (MQ=255)
                                                                                                                                   tCTGCCGCCAGGAATTTctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtctttt                                                                       >  6:177600‑M2/1‑17 (MQ=255)
                                                                                                                                   tCTGCCGCCAGGAATTTctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtctttt                                                                       <  5:177600‑M2/87‑71 (MQ=255)
                                                                                                                                    cTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAg                                                            >  1:164648/1‑97 (MQ=255)
                                                                                                                                    cTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAg                                                            <  2:164648/97‑1 (MQ=255)
                                                                                                                                        cgccAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgctgctctgtcatatcagtcgtactggcttcattcttgtcgggcaatgg    >  6:104859‑M1/1‑6 (MQ=255)
                                                                                                                                        cgccAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatctttt                                                                                             >  3:99204‑M1/1‑6 (MQ=255)
                                                                                                                                        cgccAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatctttt                                                                                             <  4:99204‑M1/60‑55 (MQ=255)
                                                                                                                                         gccAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgc                                                   <  6:114341‑M1/101‑97 (MQ=255)
                                                                                                                                          ccAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaagttgcatgatttgctgctctgtcatatcagtcgtactggcttcattcttgtcgggcaatggtg  >  7:68491‑M1/1‑4 (MQ=255)
                                                                                                                                          ccAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAatta                            <  5:86187/123‑1 (MQ=255)
                                                                                                                                          ccAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAatta                            >  6:86187/1‑123 (MQ=255)
                                                                                                                                           cAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaag                                                                >  7:94188‑M1/1‑3 (MQ=255)
                                                                                                                                           cAGaaattcctggcggcagatataatttattattgatagcggttaaccaaatcttttaccatcgctttataggtcttttgcttaag                                                                <  8:94188‑M1/86‑84 (MQ=255)
                                                                                                                                            aGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTaa                       >  7:74759/1‑126 (MQ=255)
                                                                                                                                            aGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTaa                       <  8:74759/126‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                 
TTCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAATAAATTATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGAGTTAAAAACTGTTTGTTTTAGAATATTTAATTATTTAACTGCTGAATCTTCCTTGCGAG  >  NC_000913/237999‑238285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.