| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 572,621 | IS2 (+) +5 bp | coding (156‑160/456 nt) | ybcN → | DLP12 prophage; uncharacterized protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 381260 = | NA (NA) | 38 (1.030) | 34/236 | 0.2 | 100% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 572625 | 0 (0.000) | coding (160/456 nt) | ybcN | DLP12 prophage; uncharacterized protein | |||||
| * | ? | NC_000913 | = 382590 | NA (NA) | 37 (1.030) | 30/230 | 0.3 | 100% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 572621 = | 0 (0.000) | coding (156/456 nt) | ybcN | DLP12 prophage; uncharacterized protein | |||||
TCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTGGTTGATGTCGTAACCGGTGATATCACCA > NC_000913/572475‑572766 | tcACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCcac < 6:197784/147‑1 (MQ=255)tcACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACAt > 1:188519/1‑149 (MQ=255) acaAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTCCCCAGAATGCACTCAGCCACAtgt > 3:106358/1‑149 (MQ=255) aaGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACAtgt > 7:62086/1‑147 (MQ=255) ttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAg < 5:12335‑M2/21‑1 (MQ=255) gcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAAt < 3:48167‑M2/26‑1 (MQ=255) ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATAcc > 3:129210‑M2/121‑149 (MQ=255) ggCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAAAGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccaga < 3:20916‑M2/149‑26 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGa < 6:151295‑M2/24‑1 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGa > 5:151295‑M2/118‑141 (MQ=255) aaCTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaa > 2:199340‑M2/1‑121 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCtcatc < 3:99305‑M2/34‑1 (MQ=255) ttCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaacc < 7:39989‑M2/148‑31 (MQ=255) tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGt > 4:90926‑M2/106‑148 (MQ=255) tcggtcggCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTCCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcact > 4:106358‑M2/1‑108 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGa > 4:152001‑M2/103‑126 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGa < 3:152001‑M2/24‑1 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTc > 5:60071‑M2/97‑148 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTc < 6:60071‑M2/52‑1 (MQ=255) gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccac < 4:3307‑M2/1‑1 (MQ=255) gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccac > 3:3307‑M2/96‑96 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaca > 7:158815‑M2/90‑91 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaca < 8:158815‑M2/2‑1 (MQ=255) aGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct < 2:80051‑M2/149‑57 (MQ=255) aGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct < 1:205761‑M2/149‑57 (MQ=255) ccTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt < 4:153156‑M2/148‑58 (MQ=255) aggGCAAATGCTTTCTCTTGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 4:20916‑M2/1‑78 (MQ=255) ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATg < 3:90926‑M2/77‑1 (MQ=255) gacaaATGCTTTCGCATGGTGCTTAAACCCTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatc > 4:148932‑M2/3‑76 (MQ=255) gCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 3:153156‑M2/1‑75 (MQ=255) aaaTGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact > 8:51216‑M2/1‑73 (MQ=255) aaaTGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact < 7:51216‑M2/148‑76 (MQ=255) tCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 8:62086‑M2/1‑65 (MQ=255) aTGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa > 2:188519‑M2/1‑61 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTgg > 3:145028‑M2/48‑114 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTgg < 4:145028‑M2/67‑1 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATTCCTCATCAGCAGGGGTAAAACGTTCGCCACTc < 4:4920‑M2/59‑1 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTc > 3:4920‑M2/47‑105 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTAt < 4:129210‑M2/103‑1 (MQ=255) aaCCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagcctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg > 8:39989‑M2/1‑51 (MQ=255) ccGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 1:80051‑M2/1‑49 (MQ=255) cGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg < 2:101286‑M2/149‑102 (MQ=255) gTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgt > 2:205761‑M2/1‑47 (MQ=255) gTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcactta < 7:57124‑M2/88‑42 (MQ=255) gTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcactta > 8:57124‑M2/1‑47 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGaa < 2:144458‑M2/106‑1 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGaa > 1:144458‑M2/42‑147 (MQ=255) gCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataag < 8:113110‑M2/91‑48 (MQ=255) gCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataag > 7:113110‑M2/1‑44 (MQ=255) gTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaat > 8:79781‑M2/1‑42 (MQ=255) gTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaat < 7:79781‑M2/86‑45 (MQ=255) tgataacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCa > 4:15013‑M2/37‑146 (MQ=255) tGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 8:87710‑M2/109‑69 (MQ=255) tGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt > 7:87710‑M2/1‑41 (MQ=255) aacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTc > 1:186010‑M2/33‑84 (MQ=255) aacagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTc < 2:186010‑M2/52‑1 (MQ=255) acagatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTg > 6:42732‑M2/32‑149 (MQ=255) agatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCtcat > 6:58387‑M2/30‑62 (MQ=255) agatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCtcat < 5:58387‑M2/33‑1 (MQ=255) agatgtctggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATcag < 6:144795‑M2/36‑1 (MQ=255) cAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 6:132416‑M2/100‑69 (MQ=255) cAGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt > 5:132416‑M2/1‑32 (MQ=255) aGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataag < 6:193857‑M2/78‑48 (MQ=255) aGTCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataag > 5:193857‑M2/1‑31 (MQ=255) tCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatat < 4:26075‑M2/82‑54 (MQ=255) tCTTTCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatat > 3:26075‑M2/1‑29 (MQ=255) tggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCg < 2:48641‑M2/53‑1 (MQ=255) tggaaatataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCg > 1:48641‑M2/23‑75 (MQ=255) ttCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa > 7:137288‑M2/1‑26 (MQ=255) ttCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa < 8:137288‑M2/144‑119 (MQ=255) tCCCAGAATGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcag > 1:101286‑M2/1‑25 (MQ=255) atataggggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTGGTTGATGTCGTAAc < 3:15013‑M2/132‑1 (MQ=255) aaTGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta > 2:100610‑M2/1‑19 (MQ=255) aaTGCACTCAGCCACATGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta < 1:100610‑M2/95‑77 (MQ=255) gggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAAc < 5:110338‑M2/48‑1 (MQ=255) gggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAAc > 6:110338‑M2/12‑59 (MQ=255) gggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATAtc < 2:73152‑M2/95‑1 (MQ=255) gggcaaatccaCATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATAtc > 1:73152‑M2/12‑106 (MQ=255) caCATGTGGTACAGCGAAATCAGGGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTGGTTGATGTCGTAACCGGTGATATcacca < 5:69913‑M2/146‑1 (MQ=255) | TCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTGGTTGATGTCGTAACCGGTGATATCACCA > NC_000913/572475‑572766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |