New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 739779105 (1.140)4 (0.050) 4/242 NT 4.0% coding (273/1419 nt) phr deoxyribodipyrimidine photolyase, FAD‑binding
?NC_000913 = 739800 92 (1.070)coding (294/1419 nt) phr deoxyribodipyrimidine photolyase, FAD‑binding
Rejected: Frequency below/above cutoff threshold.

Only 100 of 130 total aligned reads displayed.

GGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGTGA  >  NC_000913/739632‑739927
                                                                                                                                                   |                                                                                                                                                    
ggCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGgtgt                                                                                                                                                     >  8:35569/1‑149 (MQ=255)
      gCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGcgcg                                                                                                                                                >  1:192089/1‑148 (MQ=255)
      gCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGcgcg                                                                                                                                                <  2:192089/148‑1 (MQ=255)
        aTAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGa                                                                                                                                              >  7:381495/1‑148 (MQ=255)
         tAACATGTCGCCGTGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGCCTTTGTCGCCAGTGTCGAAATAGTTTAACAGGTGTGCGCGGaat                                                                                                                                            >  1:73867/1‑148 (MQ=255)
         tAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGaa                                                                                                                                             >  1:25718/1‑148 (MQ=255)
           aCATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGaaaa                                                                                                                                           >  4:151326/1‑148 (MQ=255)
           aCATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGaaaa                                                                                                                                           <  1:359959/148‑1 (MQ=255)
            cATGTCGGCGCGTCAGGCTGAACTTATCATTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTTAAGTGGATGTCTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTTTGCGCGGAAAACa                                                                                                                                         <  4:140185/149‑1 (MQ=255)
            cATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGaaaa                                                                                                                                           >  8:284519/1‑147 (MQ=255)
            cATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAAc                                                                                                                                          <  8:409041/148‑1 (MQ=255)
            cATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAAc                                                                                                                                          >  7:409041/1‑148 (MQ=255)
             aTGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAg                                                                                                                                        >  3:10762/1‑149 (MQ=255)
                        tCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCcacc                                                                                                                             <  5:115196‑M2/149‑5 (MQ=255)
                            gCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgtt                                                                                                                         <  6:180702‑M2/149‑9 (MQ=255)
                             cTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgttt                                                                                                                        <  2:103936‑M2/149‑10 (MQ=255)
                              tGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgttt                                                                                                                        <  3:24687‑M2/148‑10 (MQ=255)
                              tGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGtttt                                                                                                                       >  6:121594/1‑149 (MQ=255)
                                aaCTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCTGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTtat                                                                                                                     <  8:201124/149‑1 (MQ=255)
                                aaCTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGtttt                                                                                                                       <  8:1591/147‑1 (MQ=255)
                                  cTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATaa                                                                                                                   <  1:197930/149‑1 (MQ=255)
                                  cTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAATGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATaa                                                                                                                   >  2:79963/1‑149 (MQ=255)
                                      tCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTa                                                                                                                <  7:284519/148‑1 (MQ=255)
                                        aaTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCa                                                                                                             <  8:360513/149‑1 (MQ=255)
                                        aaTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCa                                                                                                             <  2:169927/149‑1 (MQ=255)
                                        aaTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCa                                                                                                             <  8:381495/149‑1 (MQ=255)
                                        aaTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTATGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCa                                                                                                             <  7:244398/149‑1 (MQ=255)
                                        aaTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATCGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCa                                                                                                             <  7:101739/149‑1 (MQ=255)
                                         aTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAg                                                                                                            <  4:367753/149‑1 (MQ=255)
                                         aTGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAg                                                                                                            >  2:234028/1‑149 (MQ=255)
                                            cTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTa                                                                                                          <  8:280783/148‑1 (MQ=255)
                                            cTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTAt                                                                                                         <  6:225933/149‑1 (MQ=255)
                                             tCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGggtaacgctgttttccgcgcacacctgtttaactatttcg                                                                                                              <  7:367782‑M1/143‑41 (MQ=255)
                                             tCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGggtaacgctgttttccgcgcacacctgtttaactatttcg                                                                                                              >  8:367782‑M1/1‑103 (MQ=255)
                                               aaCTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATg                                                                                                        >  6:379872/1‑147 (MQ=255)
                                                 cTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGTTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTACACAGGTGTGCGGGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGt                                                                                                    <  7:164042/149‑1 (MQ=255)
                                                    aaTGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGaa                                                                                                 <  8:274319/149‑1 (MQ=255)
                                                         gCTACAAATAGCGCTTTCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGc                                                                                            <  4:348720/149‑1 (MQ=255)
                                                             cAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCgg                                                                                          <  7:286600/147‑1 (MQ=255)
                                                              aaaTAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGgcg                                                                                       >  1:36991/1‑149 (MQ=255)
                                                                   gcgcTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCggg                                                                                   <  4:42293/148‑1 (MQ=255)
                                                                    cgcTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAt                                                                                 <  1:103936/149‑1 (MQ=255)
                                                                      cTTGCGGAAACAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAtgt                                                                               <  3:277536/149‑1 (MQ=255)
                                                                      cTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACACACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAtgt                                                                               >  4:277536/1‑149 (MQ=255)
                                                                      cTTGCGGAAAAAGGTATTCCTTTATTGGTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAtgt                                                                               <  5:180702/149‑1 (MQ=255)
                                                                       ttGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATAAGTATGAAGTGAATGAGCGGGCGCGGGAtgtg                                                                              >  1:92339/1‑149 (MQ=255)
                                                                             aaaaaGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGtt                                                                        <  4:10762/149‑1 (MQ=255)
                                                                             aaaaaGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGtt                                                                        <  5:93767/149‑1 (MQ=255)
                                                                                 aGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGaaa                                                                    <  6:83703/149‑1 (MQ=255)
                                                                                 aGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGaaa                                                                    <  8:423036/149‑1 (MQ=255)
                                                                                   gTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGggtaacgctgttttccgcgcacacctgtttaa                                                                                                                      <  2:322417‑M1/97‑33 (MQ=255)
                                                                                   gTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGggtaacgctgttttccgcgcacacctgtttaa                                                                                                                      >  1:322417‑M1/1‑65 (MQ=255)
                                                                                   gTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGa                                                                                              <  3:277023/121‑1 (MQ=255)
                                                                                   gTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTAACAACCTGTTTTATTACTATCATTATGAAGTGAATGa                                                                                              >  4:277023/1‑121 (MQ=255)
                                                                                      ttCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAgc                                                                <  4:7410/148‑1 (MQ=255)
                                                                                         cTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCTGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTg                                                            >  2:283929/1‑149 (MQ=255)
                                                                                          tttATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCTTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAg                                                                          <  2:147673/134‑1 (MQ=255)
                                                                                          tttATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAg                                                                          >  1:147673/1‑134 (MQ=255)
                                                                                                 ttCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAtgt                                                                               >  7:132981/1‑122 (MQ=255)
                                                                                                 ttCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGAtgt                                                                               <  8:132981/122‑1 (MQ=255)
                                                                                                      tGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGgtgt                                               <  1:182618/149‑1 (MQ=255)
                                                                                                           gggaggccTTTGTCGCCAGTGTCGAACTCGTTAAACAGGTGTGCGCGGAACACAGCGTGACCCACCTGTTTTATAACTATCAGGCTGAAGTGAATGCGCGGGCGCGGGATGTGGAAGTGGAAAGAGCGCTGCGTAACGTGGTGTGTGaa                                          <  4:315748/142‑1 (MQ=255)
                                                                                                             gATGACTATGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGAGCGGAAAACAGCGTAACCCAACAGTTTTATACCTATCAGTATCAAGAGAAAGAGCCGGCGCGGGAGGAGGAAGTGGAAAGAGCGCTGCGTGACGAGGTCTGGGAAg                                         >  4:204141/1‑148 (MQ=255)
                                                                                                              aTGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGa                                       <  5:379872/149‑1 (MQ=255)
                                                                                                              aTGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGa                                       >  2:219868/1‑149 (MQ=255)
                                                                                                              aTGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGa                                       >  3:24286/1‑149 (MQ=255)
                                                                                                                 aCTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGAttt                                    <  4:24286/149‑1 (MQ=255)
                                                                                                                  cTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTtat                                                                                                                     >  8:295763/1‑67 (MQ=255)
                                                                                                                  cTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTtat                                                                                                                     <  7:295763/67‑1 (MQ=255)
                                                                                                                  cTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGAttt                                    >  3:70533/1‑148 (MQ=255)
                                                                                                                     tGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTtga                                  <  7:255167/147‑1 (MQ=255)
                                                                                                                         gCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAg                            >  3:211148/1‑149 (MQ=255)
                                                                                                                          ccAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGc                           <  7:35569/149‑1 (MQ=255)
                                                                                                                              tgtCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCCCCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGCGCGCTGCGTAACGTGGTGCGTGAAGGATTTGATGACAGCGTGa                       >  5:240190/1‑149 (MQ=255)
                                                                                                                              tgtCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGa                       <  2:163672/149‑1 (MQ=255)
                                                                                                                                 cGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatacctttttccgcaagcgctatttgtagcccattcagttga                          <  7:367782‑M2/143‑104 (MQ=255)
                                                                                                                                  gAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTTTGAAGGATTTGATGACAGCGTGATCCt                   >  6:366750/1‑149 (MQ=255)
                                                                                                                                  gAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACa                             <  7:169000/139‑1 (MQ=255)
                                                                                                                                  gAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACa                             >  8:169000/1‑139 (MQ=255)
                                                                                                                                  gAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCt                   <  4:70533/149‑1 (MQ=255)
                                                                                                                                   aaaTAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTg                  >  7:96525/1‑149 (MQ=255)
                                                                                                                                      tAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTgccg               >  2:236236/1‑149 (MQ=255)
                                                                                                                                        gTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTgccgcc             >  6:232016/1‑149 (MQ=255)
                                                                                                                                         ttAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatac                                                                >  1:322417‑M2/1‑32 (MQ=255)
                                                                                                                                         ttAAACAGGTGTGCGCGGAAAACAGCGTTACCcacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatac                                                                <  2:322417‑M2/97‑66 (MQ=255)
                                                                                                                                         ttAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGTGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCt            <  5:232016/149‑1 (MQ=255)
                                                                                                                                         ttAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGgtgtgt                                             <  4:131923/116‑1 (MQ=255)
                                                                                                                                         ttAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGgtgtgt                                             >  3:131923/1‑116 (MQ=255)
                                                                                                                                           aaaCAGGTGggtaacgctgttttccgcgcacacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatacctttttccgcaagcgctatttgtagcccattcagttgagcattgataagttcag          <  2:103936‑M1/149‑141 (MQ=255)
                                                                                                                                           aaaCAGGTGggtaacgctgttttccgcgcacacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatacctttttccgcaagcgctatttgtagcccattcagttgagcattgataagttca           <  7:280783‑M1/148‑140 (MQ=255)
                                                                                                                                           aaaCAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTTCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTgg          >  1:59117/1‑149 (MQ=255)
                                                                                                                                            aaCAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTgg          <  3:163767/148‑1 (MQ=255)
                                                                                                                                            aaCAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGgc         >  3:58235/1‑149 (MQ=255)
                                                                                                                                             aCAGGTGggtaacgctgttttccgcgcacacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatacctttttccgcaagcgctatttgtagcccattcagttgagcattgataagttcagcc        <  3:7410‑M1/149‑143 (MQ=255)
                                                                                                                                             aCAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGgcg        >  3:186705/1‑149 (MQ=255)
                                                                                                                                              cAGGTGTGCGCGGAAAACAGCGTTCAACACCTGTTATATAACTATCAGTATGAAGTGAATGAGCGGGCGAGGGATGTGGAAGTTGAAAGATCGCTGCGTAACGTGGTGTGTTAAGGAtt                                     >  1:112853/1‑119 (MQ=255)
                                                                                                                                                ggTGggtaacgctgttttccgcgcacacctgtttaactatttcgacactggcgacaaagtcatccacttcacggaacaataaaggaatacctttttccgcaagcgctatttgtagcccattcagttgagcattgataagttcagcctga     <  5:115196‑M1/149‑146 (MQ=255)
                                                                                                                                                 gtgtGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGt    <  4:211148/149‑1 (MQ=255)
                                                                                                                                                 gtgtGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGt    <  1:123167/149‑1 (MQ=255)
                                                                                                                                                   gtgCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGGATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGtga  <  6:115196/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGTGA  >  NC_000913/739632‑739927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.