New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 696863 =31 (0.350)28 (0.340)
+GAAGAAACAATC
7/258 5.2 41.0% intergenic (‑33/+2) glnW/glnU tRNA‑Gln/tRNA‑Gln
?NC_000913 = 697134 57 (0.640)intergenic (‑1/+379) metT/asnB tRNA‑Met/asparagine synthetase B
Rejected: Coverage evenness skew score above cutoff.

CTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCG  >  NC_000913/696731‑697003
                                                                                                                                    |                                                                                                                                            
cTACGTATCCAGATTGTTCCTTCGATTGCTTGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTTCCTTACTGCTTGGCGATCACCCAATAACCGGGCTCGGAACCGATTACTCGAAGAAGATGGCTGGGGTACCt                                                                                                                               <  6:26044/148‑1 (MQ=21)
   cGTAGCCATATTGCTTCCTCGATCGCTGGGGTACCTGGATTCGATCCAGGGAATGACGGTATCATAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGAt                                                                                                                           <  3:172476/149‑1 (MQ=25)
                        aTGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTg                                                                                                                              <  8:259879/125‑1 (MQ=255)
                        aTGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTg                                                                                                                              >  7:259879/1‑125 (MQ=255)
                                      tGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGTCGGTGAACCGCTTACTCGAAGAAGATGGCTgg                                                                                                                                      <  8:344906/103‑1 (MQ=255)
                                      tGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGTCGGTGAACCGCTTACTCGAAGAAGATGGCTgg                                                                                                                                      >  7:344906/1‑103 (MQ=255)
                                                           cGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAAACGCTTACTCGAAGAAGATGGCTGGGGTActt                                                                                                                               >  8:387415/1‑87 (MQ=25)
                                                                                tACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTAc                                                                                   <  6:276516/112‑1 (MQ=255)
                                                                                tACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTAc                                                                                   >  5:276516/1‑112 (MQ=255)
                                                                                        ggCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCg                                                                                                         <  5:167633/82‑1 (MQ=255)
                                                                                        ggCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCg                                                                                                         >  6:167633/1‑82 (MQ=255)
                                                                                        ggCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTg                                      >  7:187044/1‑149 (MQ=255)
                                                                                         gCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGc                                     >  7:284233/1‑149 (MQ=255)
                                                                                          cGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCg                                    >  7:87189/1‑149 (MQ=255)
                                                                                           gATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTTGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCgg                                   <  8:187044/149‑1 (MQ=255)
                                                                                           gATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGt                                              <  8:162093/138‑1 (MQ=255)
                                                                                           gATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGt                                              >  7:162093/1‑138 (MQ=255)
                                                                                                cccAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCg                                                              >  8:21798/1‑117 (MQ=255)
                                                                                                cccAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCg                                                              <  7:21798/117‑1 (MQ=255)
                                                                                                  cAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGc                                     <  4:145669/140‑1 (MQ=255)
                                                                                                  cAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGc                                     >  3:145669/1‑140 (MQ=255)
                                                                                                  cAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGc                              >  4:141134/1‑147 (MQ=255)
                                                                                                  cAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGc                              >  2:258419/1‑147 (MQ=255)
                                                                                                    aTAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGAAATGCCGGTATCAAAAACCGTTGCCTTACCGCTTGGCGCTCCCCCATCCGTACAACGCTTTCTGGTGAATGGTGAGGGAGGCgagc                          >  1:260930/1‑148 (MQ=25)
                                                                                                       aCCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACtt                       >  6:285544/1‑149 (MQ=255)
                                                                                                       aCCGGGCGGGGAACCGCTTACTCGAAGATGATGGGTGGGGTACCTGGAGTCGAACCAGGAAATGCCGGTATCAAAAACGGGTGCCTTACCGCTTGGCGATACCCCATCCGTACACCGCTTTCTGGTGAATGGTGCGGGAGGCGAGACtt                       <  2:260930/149‑1 (MQ=25)
                                                                                                        ccGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACtt                       >  2:116096/1‑148 (MQ=255)
                                                                                                              ggTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCg                >  7:25895/1‑149 (MQ=255)
                                                                                                                       cTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTg       <  8:284233/149‑1 (MQ=255)
                                                                                                                           cTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTgcggc   <  5:285544/149‑1 (MQ=255)
                                                                                                                            tCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTgcggcg  >  7:136097/1‑149 (MQ=255)
                                                                                                                                    |                                                                                                                                            
CTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCG  >  NC_000913/696731‑697003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.