| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 643502 = | 43 (1.090) | 10 (0.270) | 9/244 | 2.9 | 20.4% | intergenic (+176/+55) | ybdR/rnk | putative Zn‑dependent NAD(P)‑binding oxidoreductase/regulator of nucleoside diphosphate kinase |
| ? | NC_000913 | 643524 = | 38 (1.030) | intergenic (+198/+33) | ybdR/rnk | putative Zn‑dependent NAD(P)‑binding oxidoreductase/regulator of nucleoside diphosphate kinase | |||||
CCATGACGATAATCGCCGCCATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCGGAAGTTCCCAGTGAAT > NC_000913/643359‑643649 | ccATGACGATAATCGCCGCCATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGa > 1:69637/1‑149 (MQ=255) gccATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTg < 4:151905/149‑1 (MQ=255) gccATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTg > 2:193702/1‑149 (MQ=255) attcactgggcaattccgggcggcgttgcaacccaccttgaagtgcgggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCAtcctcgg > 4:97‑M1/127‑147 (MQ=255) attcactgggaacttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgccaAGAGGATGCGAGTGCATCCTCTg < 7:94114‑M1/23‑1 (MQ=255) ccATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGa > 4:99137/1‑136 (MQ=255) ccATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGa < 3:99137/136‑1 (MQ=255) ccATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTgg < 8:109035/149‑1 (MQ=255) tAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGc > 5:77760/1‑148 (MQ=255) tgggaacttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGAt > 6:44228‑M1/121‑127 (MQ=255) tgggaacttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGAt < 5:44228‑M1/7‑1 (MQ=255) tCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCa > 7:148554/1‑146 (MQ=255) aacttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgccaAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGa > 8:94114‑M1/117‑149 (MQ=255) aaaTCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAg < 6:77760/149‑1 (MQ=255) ttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAATGCATCCTCTg > 3:133798‑M1/114‑136 (MQ=255) ttccgggcggcgttgcaacccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAATGCATCCTCTg < 4:133798‑M1/23‑1 (MQ=255) tATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCg > 1:180050/1‑149 (MQ=255) ggATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTtgt > 6:69501/1‑149 (MQ=255) aaaaTGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGa > 3:15073/1‑131 (MQ=255) aaaaTGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGa < 4:15073/131‑1 (MQ=255) cccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATg > 1:172619‑M1/96‑103 (MQ=255) cccaccttgaagtgctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATg < 2:172619‑M1/8‑1 (MQ=255) aTGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATggg < 2:69637/149‑1 (MQ=255) ttCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGAtt > 2:99700/1‑148 (MQ=255) tGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAg > 8:120009/1‑149 (MQ=255) ccATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCa < 2:180050/149‑1 (MQ=255) aTGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAgg < 1:99700/149‑1 (MQ=255) ctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATgg < 5:113969‑M1/53‑1 (MQ=255) ctggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATgg > 6:113969‑M1/82‑134 (MQ=255) tggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCATCCTCTGGGCAAAGc < 1:174780‑M1/31‑1 (MQ=255) tggaactcgaataccagccagaagctgctggcgactacctgctttaatcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCATCCTCTGGGCAAAGc > 2:174780‑M1/81‑111 (MQ=255) cacaAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTa > 4:145065/1‑110 (MQ=255) cacaAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTa < 3:145065/110‑1 (MQ=255) cacaAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTACATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCcag > 5:21040/1‑148 (MQ=255) acaAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCcag > 2:27416/1‑147 (MQ=255) aaacgaaacgGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAg > 5:62671/1‑82 (MQ=255) aaacgaaacgGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAg < 6:62671/82‑1 (MQ=255) acgaaacgGAATAATTTTGCAGCAAAAGTGAACAGTGACAACCACGAAAAATTGCTCATTTTGCTTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGAGCAGAAGGGATTAAAGCAGGTAGTCGACAGCAGCtt > 7:6127/1‑149 (MQ=255) cagcaAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGtt < 5:69501/148‑1 (MQ=255) agcaATAGTTTACAGTGAGTACGAGGATAATTTGCTGTTTTTGCGTATTGATGTTGGGAGTGCATCATCTGGGCAAAGCGAGTTATCGGTTGTGCAGATGTGTTTTATGCTGGTAGTCGCCAGCTGCTTCTGGGTTGTATTCGAGTTcc < 8:6127/149‑1 (MQ=255) caAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAg < 7:120009/149‑1 (MQ=255) aaGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCcagca > 7:79371/1‑120 (MQ=255) aaGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCcagca < 8:79371/120‑1 (MQ=255) tcccatctgcacaagcgataactcgctttgcccAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTgg < 4:138521‑M1/116‑1 (MQ=255) tGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTg < 2:38468/56‑1 (MQ=255) tGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTg > 1:38468/1‑56 (MQ=255) agaACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGt < 1:27416/149‑1 (MQ=255) gaACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTgg > 6:164339/1‑146 (MQ=255) gaACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTgg < 5:164339/146‑1 (MQ=255) gaACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGtt > 1:179227/1‑149 (MQ=255) aaCCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTctgg < 8:13122/114‑1 (MQ=255) aaCCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTctgg > 7:13122/1‑114 (MQ=255) cAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCaa > 1:2351/1‑149 (MQ=255) gCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCgg > 6:125070/1‑148 (MQ=255) gCGTAAAGAGGATGCGAGTACATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCGGAAGTTCCCa < 6:21040/148‑1 (MQ=255) cGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCGGAAGTTCCCAGt < 2:2351/149‑1 (MQ=255) aaGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCGGAAGTTCCCAGTGAAt < 1:193702/149‑1 (MQ=255) AGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGt < 6:87881‑M1/98‑1 (MQ=255) AGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGt > 5:87881‑M1/1‑98 (MQ=255) | CCATGACGATAATCGCCGCCATAATCAGAAATCCTATCAGGATGTAAAATGCTTCTGCCATGGTTATTCCCACAAACGAAACGGAATAATTTTGCAGCAAAAGTGAACAGTGAGAACCAGGAAAAATTGCTGATTTTGCGTAAAGAGGATGCGAGTGCATCCTCTGGGCAAAGCGAGTTATCGCTTGTGCAGATGGGATTAAAGCAGGTAGTCGCCAGCAGCTTCTGGCTGGTATTCGAGTTCCAGCACTTCAAGGTGGGTTGCAACGCCGCCCGGAAGTTCCCAGTGAAT > NC_000913/643359‑643649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |