New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2856434NA (NA)3 (0.040) 3/236 NT NA noncoding (9/24 nt) REP198 (repetitive extragenic palindromic) element; contains 1 REP sequences REP198 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 2856440 NA (NA)noncoding (15/24 nt) REP198 (repetitive extragenic palindromic) element; contains 1 REP sequences REP198 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 117 total aligned reads displayed.

GCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAAT  >  NC_000913/2856289‑2856581
                                                                                                                                                 |                                                                                                                                                   
gcgTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATc                                                                                                                                                  <  3:561/149‑1 (MQ=255)
   tGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGc                                                                                                                                               <  1:294425/149‑1 (MQ=255)
      tGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctg                                                                                                                                            <  6:109514‑M2/149‑4 (MQ=255)
      tGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctg                                                                                                                                            <  7:164957‑M2/149‑4 (MQ=255)
      tGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctg                                                                                                                                            <  3:340442‑M2/149‑4 (MQ=255)
       gaaagaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCct                                                                                                                                             >  3:166231‑M2/1‑145 (MQ=255)
       gaaagaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGACTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGCAGCGGCTGGGAATTGATAAAACGGCATTGATTTAACTGCAAATTTCCGGACAGATCTCCctgt                                                                                                                                           <  6:360169‑M2/149‑5 (MQ=255)
        aaagaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtc                                                                                                                                          <  3:342031‑M2/149‑6 (MQ=255)
        aaagaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACACTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtc                                                                                                                                          <  8:153968‑M2/149‑6 (MQ=255)
          agaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGTGCTGAAACGCACGACCCTGGTGTCACGTATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtccg                                                                                                                                        >  6:268578‑M2/1‑142 (MQ=255)
           gaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtccgg                                                                                                                                       <  2:376753‑M2/149‑9 (MQ=255)
           gaaaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACACTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtccgg                                                                                                                                       <  4:332148‑M2/149‑9 (MQ=255)
             aaCCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGGCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCctgtccggca                                                                                                                                     >  3:200676‑M2/1‑139 (MQ=255)
                        tGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCAt                                                                                                                           >  6:415436/1‑148 (MQ=255)
                          gTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGTGGCTGAAACGCACGACCCTGCTGTCACGGTTGAAGCGGCTGGGAATTGATATATCGGGATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGGATTGTATTCATGa                                                                                                                         <  8:56519/148‑1 (MQ=255)
                          gTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAg                                                                                                                        >  5:319320/1‑149 (MQ=255)
                              ccGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGttt                                                                                                                    >  5:174728/1‑149 (MQ=255)
                                  gCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTc                                                                                                                <  5:109514/149‑1 (MQ=255)
                                  gCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTc                                                                                                                <  8:164957/149‑1 (MQ=255)
                                   ccTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTCATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGATTTTTCg                                                                                                               >  3:70586/1‑149 (MQ=255)
                                    cTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCg                                                                                                               >  4:43850/1‑148 (MQ=255)
                                     tAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGa                                                                                                             >  2:359438/1‑149 (MQ=255)
                                     tAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGa                                                                                                             >  5:54664/1‑149 (MQ=255)
                                       aaGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGa                                                                                                             <  3:332148/147‑1 (MQ=255)
                                        aGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGa                                                                                                          >  6:210679/1‑149 (MQ=255)
                                             cTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATAttt                                                                                                     <  1:359438/149‑1 (MQ=255)
                                              tGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCAt                                                                                                                           <  1:3512/126‑1 (MQ=255)
                                              tGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCAt                                                                                                                           >  2:3512/1‑126 (MQ=255)
                                               gcgcAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTAATGAGGTTTTTTCGGAGGATAttttt                                                                                                   >  4:372231/1‑149 (MQ=255)
                                                cgcAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATAttttt                                                                                                   <  3:43850/148‑1 (MQ=255)
                                                cgcAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGCTTTTTTCGGACGATATTTTTc                                                                                                  <  4:342031/149‑1 (MQ=255)
                                                 gcAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTcc                                                                                                 >  1:416449/1‑149 (MQ=255)
                                                  cAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCg                                                                                                >  8:314749/1‑149 (MQ=255)
                                                  cAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGGCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCg                                                                                                <  1:376753/149‑1 (MQ=255)
                                                   aaCGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCgg                                                                                               >  2:10733/1‑149 (MQ=255)
                                                   aaCGTCGGGGGCTGAAACGCACGACCCTGCTGTCACGGATGACGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCgg                                                                                               <  8:237326/149‑1 (MQ=255)
                                                        cTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGtt                                                                                          >  6:263790/1‑149 (MQ=255)
                                                         tGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTc                                                                                                  <  1:257327/140‑1 (MQ=255)
                                                         tGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTc                                                                                                  >  2:257327/1‑140 (MQ=255)
                                                          ggggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCt                                                                                        >  8:316268/1‑149 (MQ=255)
                                                           gggCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTg                                                                                       >  7:98418/1‑149 (MQ=255)
                                                                 aaaCGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCAcc                                                                                  <  7:153968/148‑1 (MQ=255)
                                                                 aaaCGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCAc                                                                                   <  2:371273/147‑1 (MQ=255)
                                                                 aaaCGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCg                                                                                 <  7:193283/149‑1 (MQ=255)
                                                                   aCGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGa                                                                               <  7:293674/149‑1 (MQ=255)
                                                                   aCGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGa                                                                               >  3:155460/1‑149 (MQ=255)
                                                                     gCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACg                                                                             >  8:272206/1‑149 (MQ=255)
                                                                       aCGACCCTGCTGGCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCt                                                                           >  8:355070/1‑149 (MQ=255)
                                                                          aCCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGt                                                                        >  8:421774/1‑149 (MQ=255)
                                                                           cccTGCTGTCACGCATGAAGCGGCTGGCAATTCATAAATCCGCACTGAACTACCTGCAAATTGCCGGACAGATCTGCCTGCCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTc                                                                       <  6:319320/149‑1 (MQ=255)
                                                                             ctgctgTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGGTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCAt                                                                     <  3:350117/149‑1 (MQ=255)
                                                                                  gTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGGCATCgatg                                                                <  6:93053/149‑1 (MQ=255)
                                                                                   tCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATa                                                                                                                                   >  7:79610/1‑81 (MQ=255)
                                                                                   tCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATa                                                                                                                                   <  8:79610/81‑1 (MQ=255)
                                                                                   tCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgatga                                                               <  5:263790/149‑1 (MQ=255)
                                                                                     aCGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGgcagatctgtccggcaa                                                                                                                                    <  6:101388‑M1/78‑18 (MQ=255)
                                                                                     aCGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGgcagatctgtccggcaa                                                                                                                                    >  5:101388‑M1/1‑61 (MQ=255)
                                                                                                   tGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGtt                                                 >  6:63134/1‑147 (MQ=255)
                                                                                                     ggAATTGCTACATCGGCATTGAGTTAACTGCAATTAGCCGGACAGATCGGCCTGACCGGCATACTATTCATGAGGGTTTTACGCACGATATTTTTCCGGCCGTTCTGGCCCCGGACGCCTGTCACCGATGACATGACGCACGGTTaa                                               <  8:424291/147‑1 (MQ=255)
                                                                                                     ggAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTaa                                               <  7:314749/147‑1 (MQ=255)
                                                                                                     ggAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTaa                                               <  6:288154/147‑1 (MQ=255)
                                                                                                       aaTTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCga                                                                  <  5:351955/126‑1 (MQ=255)
                                                                                                       aaTTGATAAATCGGCATGGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATc                                           <  4:43303/149‑1 (MQ=255)
                                                                                                           gATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGa                                        <  4:155460/148‑1 (MQ=255)
                                                                                                           gATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGa                                        <  6:54664/148‑1 (MQ=255)
                                                                                                            aTAAATCGGCATTGATTTAACTGCAAATTGCCGGGCAGATCTGCctgtccggcaatttgcagttaaatcaatgccgatttatcaattccccgccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcc                                      <  7:278844‑M2/149‑106 (MQ=255)
                                                                                                            aTAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGCTCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGAt                                       <  5:210679/148‑1 (MQ=255)
                                                                                                                aTCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCAt                                                                     <  1:230217/114‑1 (MQ=255)
                                                                                                                aTCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCAt                                                                     >  2:230217/1‑114 (MQ=255)
                                                                                                                aTCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGc                                  <  5:415436/149‑1 (MQ=255)
                                                                                                                    gCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCcaca                              <  6:174728/149‑1 (MQ=255)
                                                                                                                       tttaTTTAACTGCAAATTGACGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCAGGGTTAAGATCGGATGACGCCACAGCa                           <  5:360169/146‑1 (MQ=255)
                                                                                                                       ttGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACg                                                    >  1:50164/1‑124 (MQ=255)
                                                                                                                       ttGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCa                           <  7:421774/149‑1 (MQ=255)
                                                                                                                       ttGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACAATTCATGAGGTTTTTTCGGACGATATTTATCCGCCAGTTCTGGCACCGGACGCTTGTCATCGAAGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCa                           <  3:372231/149‑1 (MQ=255)
                                                                                                                        tGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCAt                          >  3:387051/1‑149 (MQ=255)
                                                                                                                           tttAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCga                                                                  <  7:143975/106‑1 (MQ=255)
                                                                                                                           tttAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCga                                                                  >  8:143975/1‑106 (MQ=255)
                                                                                                                             tAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATtctc                      <  3:78510/148‑1 (MQ=255)
                                                                                                                                 tGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgatga                                                               >  8:388662/1‑102 (MQ=255)
                                                                                                                                 tGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCgatga                                                               <  7:388662/102‑1 (MQ=255)
                                                                                                                                  gCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTcggcccg                >  6:411263/1‑149 (MQ=255)
                                                                                                                                   cAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTcggccc                 <  2:416449/147‑1 (MQ=255)
                                                                                                                                       ttGCCGGACAGATCTGCctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgt                                                                                  <  6:101388‑M2/78‑62 (MQ=255)
                                                                                                                                       ttGCCGGACAGATCTGCctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgt                                                                                  >  5:101388‑M2/1‑17 (MQ=255)
                                                                                                                                        tGCCGGACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgccagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtt          >  3:200676‑M1/1‑10 (MQ=255)
                                                                                                                                          ccGGACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagtgtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttc        <  4:332148‑M1/149‑142 (MQ=255)
                                                                                                                                          ccGGACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttc        <  2:376753‑M1/149‑142 (MQ=255)
                                                                                                                                           cGGACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatacgtgacaccagggtcgtgcgtttcagcaccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttct       >  6:268578‑M1/1‑7 (MQ=255)
                                                                                                                                           cGGACAGATCTGCCTGTCCGGCATACTATTCATGACGTTTTTTCGGACGATATTTTTCCGGCAGTACTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACg        >  7:332462/1‑148 (MQ=255)
                                                                                                                                             gACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagtgtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttcttt     <  8:153968‑M1/149‑145 (MQ=255)
                                                                                                                                             gACAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttcttt     <  3:342031‑M1/149‑145 (MQ=255)
                                                                                                                                              aCAGggagatctgtccggaaatttgcagttaaatcaatgccgttttatcaattcccagccgctgcatccgtgacagcagggtcgtgcgtttcagccccagtcgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttc    <  6:360169‑M1/149‑146 (MQ=255)
                                                                                                                                              aCAGATCTGCCTGTCCGTCTTACTATTCATGATGTTTTTTCGGACGATTTTTTTCGGGCAGTTCTGGCTCCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCTGCTGACGCCACAGCATTCTCGGCCCGGCCCAACGCATa    <  8:332462/149‑1 (MQ=255)
                                                                                                                                              aCAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCAt     >  1:321085/1‑148 (MQ=255)
                                                                                                                                               cAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttca   <  7:164957‑M1/149‑147 (MQ=255)
                                                                                                                                               cAGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttca   <  6:109514‑M1/149‑147 (MQ=255)
                                                                                                                                                aGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttcag  >  6:200172‑M1/1‑2 (MQ=255)
                                                                                                                                                aGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttc    >  3:166231‑M1/1‑2 (MQ=255)
                                                                                                                                                aGgcagatctgtccggcaatttgcagttaaatcaatgccgatttatcaattcccagccgcttcatccgtgacagcagggtcgtgcgtttcagccccagacgttgcgcagcgcctttaggcccggcaaccacgccgttggtttctttc    <  4:166231‑M1/147‑146 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
GCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAACTGCAAATTGCCGGACAGATCTGCCTGTCCGGCATACTATTCATGAGGTTTTTTCGGACGATATTTTTCCGGCAGTTCTGGCACCGGACGCTTGTCATCGATGAGATGACGCACGGTTAAGATCGGATGACGCCACAGCATTCTCGGCCCGGCCCAACGCATAAT  >  NC_000913/2856289‑2856581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.