BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	1,335,035	Δ726 bp	100%		ymiA–yciX	ymiA, yciX

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1335035	1335760	726	120 [0]	[0] 122	ymiA–yciX	ymiA,yciX

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1335034	0 (0.000)	111 (1.230)	84/256	NT	100%	intergenic (+205/‑90)	cysB/ymiA	N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein
*	?	NC_000913	1335761 =	0 (0.000)	111 (1.230)	84/256	NT	100%	intergenic (+303/‑70)	yciX/acnA	uncharacterized protein/aconitate hydratase 1; aconitase A

Only 100 of 120 total aligned reads displayed.

TTTGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGG  >  NC_000913/1334887‑1335178

tttGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGg                                                                                                                                                 >  7:182226‑M1/1‑148 (MQ=255)

tttGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGg                                                                                                                                                 >  7:389175‑M1/1‑148 (MQ=255)

      aCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtg                                                                                                                                           >  8:50624‑M1/1‑142 (MQ=255)

       cTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATATGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtg                                                                                                                                           <  3:175967‑M1/148‑8 (MQ=255)

       cTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtg                                                                                                                                           <  1:135347‑M1/148‑8 (MQ=255)

          agttctATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCAAATTACCCGCCTCCCAAACTCCAGTTTTCAAATATCTAATTCAGGTCAAAAGAATGAATTATTCACTGGgtttgtgttat                                                                                                                                       >  8:247150‑M1/3‑138 (MQ=255)

          aTTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgtta                                                                                                                                        >  7:380438‑M1/1‑138 (MQ=255)

              cTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctt                                                                                                                                    <  7:254125‑M1/148‑15 (MQ=255)

              cTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctt                                                                                                                                    <  1:369071‑M1/148‑15 (MQ=255)

                 taCCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCCAACTCCAGGTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa                                                                                                                                 >  3:242642‑M1/1‑131 (MQ=255)

                 taCCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa                                                                                                                                 <  7:87097‑M1/148‑18 (MQ=255)

                   ccGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatat                                                                                                                              >  1:176991‑M1/1‑129 (MQ=255)

                    cGTGGACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatatt                                                                                                                             <  8:343147‑M1/149‑22 (MQ=255)

                      tGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTTTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattca                                                                                                                           <  1:304201‑M1/149‑24 (MQ=255)

                        cacaATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtatctgttatctttaatattcacc                                                                                                                         >  2:196308‑M1/1‑124 (MQ=255)

                          caATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgtt                                                                                                                                         <  4:222820‑M1/131‑10 (MQ=255)

                             tatTTTTATCTCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaa                                                                                                                    <  5:243278‑M1/149‑31 (MQ=255)

                                ttttATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaa                                                                                                                    >  1:338482‑M1/1‑116 (MQ=255)

                                ttttATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaa                                                                                                                    >  1:394611‑M1/1‑116 (MQ=255)

                                    aTCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaat                                                                                                              >  2:10207‑M1/1‑112 (MQ=255)

                                       ccTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcag                                                                                                           <  2:394611‑M1/148‑40 (MQ=255)

                                       ccTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcag                                                                                                           <  2:296193‑M1/148‑40 (MQ=255)

                                         tCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCAGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggc                                                                                                        >  3:273124‑M1/1‑107 (MQ=255)

                                           atatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggctt                                                                                                      >  1:45068‑M1/1‑105 (MQ=255)

                                            tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                     <  5:306486‑M1/149‑46 (MQ=255)

                                            tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                     <  8:389175‑M1/149‑46 (MQ=255)

                                            tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                     <  7:68886‑M1/149‑46 (MQ=255)

                                            tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                     <  8:182226‑M1/149‑46 (MQ=255)

                                            tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGACAAAAGATTGAATTATTCACTGGgtttgtgttatcttta                                                                                                                                  >  1:337246‑M1/1‑104 (MQ=255)

                                             atTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATAATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc                                                                                                     >  4:380935‑M1/1‑103 (MQ=255)

                                                 ataGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaa                                                                                                 <  5:302002‑M1/148‑50 (MQ=255)

                                                  taGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATGTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaacc                                                                                               <  5:93273‑M1/149‑52 (MQ=255)

                                                   aGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccc                                                                                              >  2:373601‑M1/1‑97 (MQ=255)

                                                    gtgtaAATTACATGTAAAGTAGTGGCTAATTACCCGCCTCTCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccct                                                                                             <  6:354522‑M1/147‑54 (MQ=255)

                                                    gggTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccct                                                                                             >  1:299710‑M1/1‑96 (MQ=255)

                                                    gggTAAATTACCTCTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccct                                                                                             <  2:190760‑M1/149‑54 (MQ=255)

                                                       tAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtc                                                                                          <  2:338482‑M1/149‑57 (MQ=255)

                                                         aaTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtca                                                                                         <  1:373601‑M1/148‑58 (MQ=255)

                                                          aTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCTAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagg                                                                                                          <  3:339480‑M1/130‑41 (MQ=255)

                                                             aCCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGGCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaa                                                                                     <  1:150465‑M1/148‑62 (MQ=255)

                                                              ccTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaag                                                                                    <  7:50624‑M1/148‑63 (MQ=255)

                                                               cTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaagga                                                                                  <  1:10207‑M1/149‑65 (MQ=255)

                                                                 gTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaag                                                                                    >  3:120743‑M1/1‑83 (MQ=255)

                                                                 gTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaag                                                                                    <  4:120743‑M1/145‑63 (MQ=255)

                                                                  tAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                 >  5:142708‑M1/1‑82 (MQ=255)

                                                                  tAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaac                                                                                                >  7:27042‑M1/1‑82 (MQ=255)

                                                                    aaGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggag                                                                              <  8:330461‑M1/148‑69 (MQ=255)

                                                                     agtagtGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTTGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagct                                                                            <  1:196308‑M1/149‑71 (MQ=255)

                                                                      ttagtgTCTAATTACCCGCCTAGCAAACTCCAGTTTTCAAATCTCTATTTCAGGGCAAAAGATTGAATTCTTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagcta                                                                           <  4:242642‑M1/148‑72 (MQ=255)

                                                                       tagtGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctat                                                                          >  1:258291‑M1/1‑77 (MQ=255)

                                                                          tgtCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc                                                                       <  2:258291‑M1/149‑76 (MQ=255)

                                                                            tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgt                                                                     >  5:412391‑M1/1‑72 (MQ=255)

                                                                            tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgt                                                                     >  4:369504‑M1/1‑72 (MQ=255)

                                                                            tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcacactgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgt                                                                     >  5:200522‑M1/1‑72 (MQ=255)

                                                                             cTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctat                                                                          >  1:294818‑M1/1‑71 (MQ=255)

                                                                             cTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctat                                                                          <  2:294818‑M1/143‑73 (MQ=255)

                                                                             cTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaag                                                                                                                   <  2:266234‑M1/102‑32 (MQ=255)

                                                                              tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc                                                                    >  3:14837‑M1/1‑70 (MQ=255)

                                                                              tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc                                                                       <  7:250631‑M1/145‑76 (MQ=255)

                                                                              tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc                                                                       >  8:250631‑M1/1‑70 (MQ=255)

                                                                                aTTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaac                                                                 >  8:247084‑M1/1‑68 (MQ=255)

                                                                                aTTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaac                                                                 <  4:273124‑M1/149‑82 (MQ=255)

                                                                                    cccGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgacgtcaa                                                                  >  5:234147‑M1/1‑64 (MQ=255)

                                                                                           cGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaag                                                      >  3:53462‑M1/1‑57 (MQ=255)

                                                                                            gCAACCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaa                                                       <  6:125339‑M1/147‑92 (MQ=255)

                                                                                              aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagcca                                                   <  2:299710‑M1/149‑96 (MQ=255)

                                                                                              aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagc                                                     >  6:197754‑M1/1‑54 (MQ=255)

                                                                                               aaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaacc                                                                <  2:426398‑M1/135‑83 (MQ=255)

                                                                                               aaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaacc                                                                >  1:426398‑M1/1‑53 (MQ=255)

                                                                                                 cTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagta                                                <  5:48637‑M1/149‑99 (MQ=255)

                                                                                                    cAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaa                                               <  2:195547‑M1/147‑100 (MQ=255)

                                                                                                    cAGTTTTCAAATATCTATTTCACGTCAAAAGATTGAATTATTCACTGGggttgtgttatctttaatattcaccctgaagagactcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaagg                                             <  4:90131‑M1/149‑102 (MQ=255)

                                                                                                     aGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaagga                                            <  4:14837‑M1/149‑103 (MQ=255)

                                                                                                           cAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgt                                       <  2:344875‑M1/148‑108 (MQ=255)

                                                                                                            aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttg                                     >  2:101932‑M1/1‑40 (MQ=255)

                                                                                                             aaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgc                                    <  3:380935‑M1/149‑111 (MQ=255)

                                                                                                              atatCTATTTCAGGTCAAAAGATTGAATTAATCACTGGggttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgca                                   <  2:404636‑M1/149‑112 (MQ=255)

                                                                                                                  cTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctat                                                                          <  8:359956‑M1/106‑73 (MQ=255)

                                                                                                                         aGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagat                         >  4:344853‑M1/1‑27 (MQ=255)

                                                                                                                          ggTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataa                       <  6:142708‑M1/149‑124 (MQ=255)

                                                                                                                            tCAAAAGATTGATTTATTCAGTGGgtttgtgttatctttaatattcacgctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaa                     <  7:247150‑M1/149‑126 (MQ=255)

                                                                                                                            tCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaa                     <  6:412391‑M1/149‑126 (MQ=255)

                                                                                                                            tCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaa                     <  5:197754‑M1/149‑126 (MQ=255)

                                                                                                                            tCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgca                                   >  1:215095‑M1/1‑24 (MQ=255)

                                                                                                                             cAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaac                    >  2:160369‑M1/1‑23 (MQ=255)

                                                                                                                                 aGATTGAATTATTCACTGGgtttgggttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttac                <  1:235916‑M1/149‑131 (MQ=255)

                                                                                                                                 aGATTGAATTATTCACTGGgttagtgttaactttaatattcaccctgaagagaatcagggcttcccaaccctctcattaaggaggagatatgtcgtcaaccctacgagaagccagaaaggacacgttgcaggccaaacataaaacttac                >  8:217544‑M1/1‑19 (MQ=255)

                                                                                                                                  gATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttac                >  5:32057‑M1/1‑18 (MQ=255)

                                                                                                                                   aTTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttacca              <  6:250299‑M1/149‑133 (MQ=255)

                                                                                                                                   aTTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttacca              <  4:53462‑M1/149‑133 (MQ=255)

                                                                                                                                    ttGAATTATTCACTGGgtttgtgttatctttaatattcacgctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttacca              <  6:200522‑M1/148‑133 (MQ=255)

                                                                                                                                       aaTTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactac          >  7:136505‑M1/1‑13 (MQ=255)

                                                                                                                                        attattCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaacccta                                                             <  1:100102‑M1/97‑86 (MQ=255)

                                                                                                                                        attattCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaacccta                                                             >  2:100102‑M1/1‑12 (MQ=255)

                                                                                                                                           attCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactacta        >  2:160441‑M1/1‑9 (MQ=255)

                                                                                                                                               aCTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcct  >  3:160244‑M1/1‑5 (MQ=255)

                                                                                                                                                 tGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                 >  6:56231‑M1/1‑3 (MQ=255)

                                                                                                                                                 tGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                 <  1:198390‑M1/68‑66 (MQ=255)

                                                                                                                                                 tGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                 >  2:192594‑M1/1‑3 (MQ=255)

                                                                                                                                                 tGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                 >  2:198390‑M1/1‑3 (MQ=255)

TTTGTTACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGG  >  NC_000913/1334887‑1335178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`