New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4384359 =89 (0.980)4 (0.050) 4/236 NT 4.8% coding (521/1503 nt) yjeM putative transporter
?NC_000913 4384374 = 72 (0.820)coding (536/1503 nt) yjeM putative transporter
Rejected: Frequency below/above cutoff threshold.

AGGAAATTAATATCCTGCGCGAAATGCCCACCATTTAATAACAAAATAGTAATGCTTACTAACAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4384425‑4384359
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaTTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTTGG  >  NC_000913/4384374‑4384518
                                                                                                                                                                                                                    
AGGAAATTAATATCCTGCGCGAAATGCCCACCATTTAATAACAAAATAGTAATGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCG                                                                               >  1:123721/1‑135
AGGAAATTAATATCCTGCGCGAAATGCCCACCATTTAATAACAAAATAGTAATGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCG                                                                               <  2:123721/135‑1
                                       AACAAAATAGTAATGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATC                                                                        <  3:389345/103‑1
                                       AACAAAATAGTAATGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATC                                                                        >  4:389345/1‑103
                                                               AGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT    <  2:329427/147‑1
                                                               AGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT    <  3:104638/147‑1
                                                               AGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT    <  3:177752/147‑1
                                                               AGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT    <  6:56246/147‑1
                                                                GCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTTGG  <  2:361049/148‑1
                                                                 CATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAA               <  7:330506/134‑1
                                                                 CATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAA               >  8:330506/1‑134
                                                                                                                                                                                                                    
AGGAAATTAATATCCTGCGCGAAATGCCCACCATTTAATAACAAAATAGTAATGCTTACTAACAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4384425‑4384359
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaTTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTTGG  >  NC_000913/4384374‑4384518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.