BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3269866 =	102 (1.120)	4 (0.050)	4/236	NT	5.0%	intergenic (+264/+350)	yhaC/rnpB	pentapetide repeats‑related protein/RNase P, M1 RNA component
*	?	NC_000913	3269959 =	53 (0.600)	4 (0.050)	4/236	NT	5.0%	intergenic (+357/+257)	yhaC/rnpB	pentapetide repeats‑related protein/RNase P, M1 RNA component

Only 100 of 112 total aligned reads displayed.

AATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGAT  >  NC_000913/3269719‑3270006

aaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTttat                                                                                                                                               <  2:223457/148‑1 (MQ=255)

aaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTttat                                                                                                                                               <  4:124287/148‑1 (MQ=255)

   gCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTAc                                                                                                                                            >  5:168280/1‑148 (MQ=255)

   gCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTAc                                                                                                                                            >  1:209093/1‑148 (MQ=255)

    ccTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACg                                                                                                                                           <  2:336137/148‑1 (MQ=255)

    ccTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACg                                                                                                                                           <  4:341270/148‑1 (MQ=255)

     cTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGt                                                                                                                                          <  6:141186/148‑1 (MQ=255)

         tGCGCTACGCTTATCAGGCCTACTCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACAt                                                                                                                                      <  1:32853/148‑1 (MQ=255)

         tGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGCACAt                                                                                                                                      >  8:233255/1‑148 (MQ=255)

               aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGt                                                                                                                                 >  2:264117/1‑147 (MQ=255)

                cGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTa                                                                                                                                >  5:214465/1‑147 (MQ=255)

                 gCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaaa                                                                                                                              <  6:66427/148‑1 (MQ=255)

                      tCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGa                                                                                                                         >  2:181489/1‑148 (MQ=255)

                      tCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGa                                                                                                                         >  1:339430/1‑148 (MQ=255)

                           ccTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGa                                                                                                                     >  1:163753/1‑147 (MQ=255)

                             tACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGAt                                                                                                                    >  1:193411/1‑146 (MQ=255)

                              aCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAc                                                                                                                                        >  4:228697/1‑125 (MQ=255)

                              aCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAc                                                                                                                                        <  3:228697/125‑1 (MQ=255)

                              aCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaaa                                                                                                                              >  4:62594/1‑135 (MQ=255)

                              aCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaaa                                                                                                                              <  7:412844/135‑1 (MQ=255)

                                         gCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGa                                                                                                                         <  2:320014/129‑1 (MQ=255)

                                         gCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttcttt                                                                                                      >  5:410618/1‑148 (MQ=255)

                                         gCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttcttt                                                                                                      >  5:425283/1‑148 (MQ=255)

                                          cAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCtttt                                                                                                     <  1:241410/148‑1 (MQ=255)

                                           aaTATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGa                                                                                                                     >  4:312212/1‑131 (MQ=255)

                                           aaTATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGa                                                                                                                     <  3:312212/131‑1 (MQ=255)

                                           aaTATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                    >  1:344125/1‑148 (MQ=255)

                                           aaTATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                    >  8:32119/1‑148 (MQ=255)

                                           aaTATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGGTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                    <  8:405235/148‑1 (MQ=255)

                                              atatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCAGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCGTTTggg                                                                                                  >  5:127204/1‑147 (MQ=255)

                                               tatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGt                                                                                                 <  6:166860/147‑1 (MQ=255)

                                                 ttGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGta                                                                                                >  4:249003/1‑146 (MQ=255)

                                                 ttGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGta                                                                                                >  8:105033/1‑146 (MQ=255)

                                                  tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTg                                                                                                    <  1:290457/141‑1 (MQ=255)

                                                        tGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCg                                                                                        <  6:168280/147‑1 (MQ=255)

                                                        tGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCg                                                                                        <  2:209093/147‑1 (MQ=255)

                                                            tGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAc                                                                                   <  6:214465/148‑1 (MQ=255)

                                                                  tGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTgg                                                                                     <  6:64353/140‑1 (MQ=255)

                                                                  tGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtca                                                                              <  6:425283/147‑1 (MQ=255)

                                                                    tAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcat‑t                                                                           >  5:415670/1‑147 (MQ=255)

                                                                           gATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCACCAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGGCGTGGACAGTCAT‑TCATCTTTc                                                                   <  6:435189/148‑1 (MQ=255)

                                                                           gATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCg                                                                                        >  2:218397/1‑128 (MQ=255)

                                                                           gATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCg                                                                                        <  1:218397/128‑1 (MQ=255)

                                                                            aTAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttcttt                                                                                                      >  5:206122/1‑113 (MQ=255)

                                                                            aTAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttcttt                                                                                                      <  6:206122/113‑1 (MQ=255)

                                                                              aaGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGc                                                                >  8:279048/1‑148 (MQ=255)

                                                                               aGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGc                                                                <  4:373717/147‑1 (MQ=255)

                                                                                     tCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTAGAGTGTCGTGGACGGGCGT‑TCATCTTTCTGcccggcc                                                          >  3:206241/1‑143 (MQ=25)

                                                                                       aCGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATATTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCaaa                                                       <  2:339430/148‑1 (MQ=255)

                                                                                          ccgcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTc                                                                   >  4:263695/1‑133 (MQ=255)

                                                                                          ccgcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTc                                                                   <  3:263695/133‑1 (MQ=255)

                                                                                          ccgcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCTAAAg                                                     >  3:384490/1‑147 (MQ=255)

                                                                                           cgcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGt                                                    >  3:136030/1‑147 (MQ=255)

                                                                                           cgcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTa                                                   <  7:105033/148‑1 (MQ=255)

                                                                                            gcATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGCACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTaa                                                  <  7:233255/148‑1 (MQ=255)

                                                                                             cATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTaaa                                                 <  7:279048/148‑1 (MQ=255)

                                                                                                  ggCATGAATAAAGCTCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAAccc                                            <  1:264117/148‑1 (MQ=255)

                                                                                                   gCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACccg                                           >  8:194173/1‑148 (MQ=255)

                                                                                                   gCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACccg                                           <  2:136669/148‑1 (MQ=255)

                                                                                                    cATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACccgc                                          >  6:232892/1‑148 (MQ=255)

                                                                                                     aTGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACccgcc                                         <  7:32119/148‑1 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGAt                                                                                                                    >  2:185931/1‑72 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGAt                                                                                                                    <  1:185931/72‑1 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttctt                                                                                                       >  5:38996/1‑85 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttctt                                                                                                       <  6:38996/85‑1 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTaaa                                                 >  3:22105/1‑138 (MQ=255)

                                                                                                       gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTaaa                                                 <  4:22105/138‑1 (MQ=255)

                                                                                                        tcagtttcacctgttttacgtaaaaacccgcttcggcgggtttTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcat‑tca                                                                         <  3:216746‑M1/70‑1 (MQ=255)

                                                                                                        tcagtttcacctgttttacgtaaaaacccgcttcggcgggtttTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcat‑tca                                                                         >  4:216746‑M1/44‑113 (MQ=255)

                                                                                                        aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTg                                                                 >  1:397732/1‑121 (MQ=255)

                                                                                                        aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTg                                                                 <  2:397732/121‑1 (MQ=255)

                                                                                                        aaTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGaa                                      <  7:194173/148‑1 (MQ=255)

                                                                                                         aTAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAg                                     >  7:215038/1‑148 (MQ=255)

                                                                                                           aaaGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAACCCGCTTTCTTTTg                                                                                                    >  5:238526/1‑84 (MQ=255)

                                                                                                              gcgcACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGt                                <  4:136030/148‑1 (MQ=255)

                                                                                                               cacctgttttacgtaaaaacccgcttcggcgggtttTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtc                                                                               >  7:334297‑M1/37‑101 (MQ=255)

                                                                                                               cacctgttttacgtaaaaacccgcttcggcgggtttTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtc                                                                               <  8:334297‑M1/65‑1 (MQ=255)

                                                                                                                    tCACCAATCTGAAACCCGCCGGAACGGTTTATTACGGACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGttt                              <  5:3570/144‑1 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttct                                                                                                        <  1:36735/70‑1 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGctttct                                                                                                        >  2:36735/1‑70 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGt                                                                                       >  7:158651/1‑87 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTg                                                                 >  1:341008/1‑108 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTg                                                                 <  2:341008/108‑1 (MQ=255)

                                                                                                                     caacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGAAAAAACCCGCCGAAGCGGGTTTTTaag                         >  5:251539/1‑146 (MQ=255)

                                                                                                                      aacaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATATTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTAct                         <  2:163753/147‑2 (MQ=17)

                                                                                                                       acaaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAG‑ACCTCTTTGGGCCCCTCCAAAAGTAAAAACCCGCCGAAGGGGGGTTTTAcct                        >  7:9012/1‑145 (MQ=17)

                                                                                                                         aaTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGGGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTaaa                     <  1:181489/148‑1 (MQ=255)

                                                                                                                          aTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGACAT‑TCATCTTTCTGCCCCTCCAAAAGTaaaa                                                >  6:340480/1‑120 (MQ=255)

                                                                                                                          aTCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGACAT‑TCATCTTTCTGCCCCTCCAAAAGTaaaa                                                <  5:340480/120‑1 (MQ=255)

                                                                                                                               aaaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAAc                   <  4:109440/144‑1 (MQ=255)

                                                                                                                               aaaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACa                  <  6:415670/145‑1 (MQ=255)

                                                                                                                               aaaCCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAgg                <  8:199276/147‑1 (MQ=255)

                                                                                                                                aaCCCGCCGGAACGGTTTTTTACGTAAATAAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGTTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTTCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTg              <  6:251539/148‑1 (MQ=11)

                                                                                                                                  cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGaa            <  8:215038/148‑1 (MQ=255)

                                                                                                                                  cccGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGaa            <  2:193411/148‑1 (MQ=255)

                                                                                                                                      ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTTTTGTGTAGTGGACA‑TGATATCTGCTTTCTGCCCGGCAAAAAGATTAAACCCTCAGAAGCTGGTTTTTACTTAATACGGGTGaaccgg        >  3:108363/1‑144 (MQ=12)

                                                                                                                                       cgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCCAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGa       <  4:384490/148‑1 (MQ=255)

                                                                                                                                          aaCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAgg                <  1:325866/136‑1 (MQ=255)

                                                                                                                                          aaCGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAgg                >  2:325866/1‑136 (MQ=255)

                                                                                                                                            cGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGAt  <  2:344125/148‑1 (MQ=255)

AATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAT‑TCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGAT  >  NC_000913/3269719‑3270006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.