Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)93 (0.950) 67/282 0.4 97.8% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 2 (0.020)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =2 (0.020)63 (0.640) 51/282 1.1 96.7% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 161 total aligned reads displayed.

GTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGT  >  NC_000913/1292893‑1293187
                                                                                                                                                  |                                                                                                                                                    
    ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                                <  2:382886‑M2/149‑7 (MQ=255)
     tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                                <  2:297933‑M2/148‑7 (MQ=255)
      tccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaa                                                                                                                                              <  8:5305‑M1/16‑1 (MQ=255)
        cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                             >  1:141697‑M1/132‑148 (MQ=255)
          aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                                           >  5:254168‑M2/1‑137 (MQ=255)
          aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                                           <  4:259763‑M2/148‑12 (MQ=255)
             ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                       <  1:128390‑M2/149‑16 (MQ=255)
             ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                        >  3:259763‑M2/1‑134 (MQ=255)
             ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCTGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtattgactccaac                                                                                                                                       >  8:51885‑M2/1‑133 (MQ=255)
              tAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                                                                      <  3:51504‑M2/149‑17 (MQ=255)
              tAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCATAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                       >  2:86128‑M2/1‑133 (MQ=255)
                 ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCa                                                                                                                                    <  8:19481‑M1/26‑1 (MQ=255)
                   gCTTCGCTCAGTGTAGTAATCTAAAACTTATATTTGGGTGGTTTGTTCAGGTTATAATAGATCCTTAAATTCAGTTGTGAAATAGACAGGAATGTAAGGAATTCAAAATTGTTCATTATTTAGTGCCGCCAAGAAATATCTTATCATa                                                                                                                                  >  6:23160/1‑148 (MQ=255)
                    cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattg                                                                                                                                 >  8:264484‑M2/1‑127 (MQ=255)
                     ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                                <  4:141873‑M2/148‑23 (MQ=255)
                       cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                                              >  3:206596‑M2/1‑124 (MQ=255)
                         cTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                                    >  7:407555‑M2/1‑122 (MQ=255)
                         cTCATTGTAGTAATCTCAAACTTAAAATGGGGTGCGTAGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtg                                                                                                                           <  8:135600‑M2/149‑28 (MQ=255)
                            aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                        <  1:16199‑M2/149‑31 (MQ=255)
                            aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                        <  1:326095‑M2/149‑31 (MQ=255)
                            aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                                         >  5:315218‑M2/1‑119 (MQ=255)
                            aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgt                                                                                                                          >  1:382886‑M2/1‑119 (MQ=255)
                            aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                                           <  6:410663‑M2/130‑12 (MQ=255)
                               accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                                      <  3:320367‑M1/40‑1 (MQ=255)
                                tagtaATCTCAAACTTATATTGGGGGGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                                     >  8:218128‑M2/1‑115 (MQ=255)
                                 caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                                     <  1:65086‑M1/41‑1 (MQ=255)
                                  gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  >  3:196778‑M2/1‑113 (MQ=255)
                                  accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                                     <  2:20035‑M1/41‑1 (MQ=255)
                                     aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                                                >  1:297933‑M2/1‑110 (MQ=255)
                                     aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTCTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  <  1:17837‑M2/146‑37 (MQ=255)
                                      tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  <  1:205416‑M2/145‑37 (MQ=255)
                                      tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactta                                                                                                                                    <  6:297643‑M2/127‑19 (MQ=255)
                                      tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTATTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  <  8:295013‑M2/145‑37 (MQ=255)
                                      cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                              <  5:67565‑M1/48‑1 (MQ=255)
                                       gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg                                                                                                             <  1:393239‑M1/49‑1 (MQ=255)
                                        tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCACTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGATCTTTATTTTGTGCCGggtaatgagtccaacttattgaaagtgttttatgttcagat                                                                                                             <  6:38956‑M2/148‑42 (MQ=255)
                                          aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                          >  8:349944‑M2/1‑105 (MQ=255)
                                            aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                        >  2:67200‑M2/1‑103 (MQ=255)
                                             cTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTTAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                       >  5:100297‑M2/1‑102 (MQ=255)
                                             cTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                       >  2:17837‑M2/1‑102 (MQ=255)
                                                tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagaaagttggcagcatcaccTTGTGCCGCCaata                                                                                                                                                >  1:283759‑M1/92‑105 (MQ=255)
                                                aaattgGGGTGGTGTGCTGAGGTAATAATAGAGCCTTAACTTCAGTTGTGCAATAGCCAGGAAGGTCAGGAATTCAAACTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                      >  4:301285‑M2/3‑99 (MQ=255)
                                                 tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCGGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                                   <  2:269749‑M2/149‑52 (MQ=255)
                                                   ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATCGCCAGGAATGTAAGGAATTCAAAAGTGTGCTTGATTTTGTGCCGggtaatgaccccaacttattgatagtgttttatgttgagataatgcccgatga                                                                                                 <  4:41837‑M2/149‑54 (MQ=255)
                                                       ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                             >  7:295013‑M2/1‑92 (MQ=255)
                                                        gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                            <  5:118245‑M2/149‑59 (MQ=255)
                                                        gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGGGCAATAGCCAGGAATGTAAGGAATTAAAAATTTTTCTTTATTTTGTGCCGggttctgactccacattattgatagtgttttatgttcagataatgcccgatgaatttg                                                                                            <  7:286459‑M2/149‑59 (MQ=255)
                                                        agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                            >  4:134049‑M1/84‑149 (MQ=255)
                                                         gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                            <  3:136082‑M1/66‑1 (MQ=255)
                                                               gttgATGTAATAATAGATGCTTAAATTCAGTTGTGCAATAGCCATGAATGTAAGGAATTCTAAATTGTTCTTTATTTTGTGCCGggtaatgactacaacttattgatagtgttttatgttcagataatgcccgattactttgtcatgc                                                                                      >  8:401646‑M2/1‑84 (MQ=255)
                                                               gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                                      >  2:128390‑M2/1‑84 (MQ=255)
                                                                 tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAATTACACCgatga                                                                                   <  5:316460‑M1/75‑1 (MQ=255)
                                                                    ggTAATAATAGAGCCTTAAATTAAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttatatgttcagataatgcccgaagactttgtcatgcagctc                                                                                 <  3:321768‑M2/148‑70 (MQ=255)
                                                                      gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                                              <  5:198311‑M1/80‑1 (MQ=255)
                                                                        ataataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgcctccaacttattgatagtgttttatgttcagataaggccagatgactttgtcatgcagctccacc                                                                             <  6:161389‑M2/148‑74 (MQ=255)
                                                                        ataataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctgtgtcatgcagctccacc                                                                             <  4:268607‑M2/148‑74 (MQ=255)
                                                                         taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                                                                           <  1:59868‑M2/149‑76 (MQ=255)
                                                                           agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                                                                         >  6:67565‑M1/65‑149 (MQ=255)
                                                                             agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                       <  8:94380‑M2/149‑80 (MQ=255)
                                                                              gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                       >  4:51504‑M2/1‑69 (MQ=255)
                                                                                  actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAgg                                                                  <  2:604‑M1/92‑1 (MQ=255)
                                                                                           aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                                          >  7:5052‑M2/1‑56 (MQ=255)
                                                                                             ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                       <  5:127836‑M2/149‑96 (MQ=255)
                                                                                               gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                                      >  2:59868‑M2/1‑52 (MQ=255)
                                                                                               aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                        <  7:238699‑M1/54‑1 (MQ=255)
                                                                                                 aaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                                      <  5:197790‑M1/40‑1 (MQ=255)
                                                                                                   aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                                 <  7:58602‑M2/149‑102 (MQ=255)
                                                                                                       gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                                              >  7:135600‑M2/1‑44 (MQ=255)
                                                                                                        ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgcctccaacttattgatagtgttttatgttcagataatgaccgatgactttgtcatgcacatccaccgattttgagaacgacagcgacttccgtaccagc                                            <  3:346203‑M2/149‑107 (MQ=255)
                                                                                                        ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                            <  2:278343‑M2/149‑107 (MQ=255)
                                                                                                          aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                                     >  1:162917‑M2/1‑41 (MQ=255)
                                                                                                          aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                                     <  2:162917‑M2/122‑82 (MQ=255)
                                                                                                          aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                                           >  7:205608/1‑148 (MQ=255)
                                                                                                            gAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagatcgaccgattttgagaacgacagcgactgccgtccacgccgtg                                        <  8:288047‑M2/149‑111 (MQ=255)
                                                                                                             acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                                       <  5:252152‑M1/119‑1 (MQ=255)
                                                                                                                 taaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTAt                                   <  2:42862‑M1/123‑1 (MQ=255)
                                                                                                                  aaGGAATTCAAAAATGATCTATATTTTGTGACGggtaatgactacaactaattgatagtctttaatgttcagagaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                                  <  4:301692‑M2/149‑117 (MQ=255)
                                                                                                                   aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                                 >  2:393239‑M1/25‑149 (MQ=255)
                                                                                                                   aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                            >  5:349052‑M2/1‑32 (MQ=255)
                                                                                                                    atcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                                >  1:20035‑M1/24‑149 (MQ=255)
                                                                                                                       agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCGTGAGTGATGTCACAGTTTATGGGgag                             <  3:257186‑M1/129‑1 (MQ=255)
                                                                                                                        ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatcgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcc                            <  4:333141‑M2/149‑123 (MQ=255)
                                                                                                                        gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga                            >  3:6125‑M1/20‑149 (MQ=255)
                                                                                                                         taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                                 <  6:122469‑M1/125‑1 (MQ=255)
                                                                                                                           aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                         >  2:16199‑M2/1‑24 (MQ=255)
                                                                                                                           aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                           <  7:269009‑M2/147‑124 (MQ=255)
                                                                                                                             aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga                       >  6:127836‑M2/1‑22 (MQ=255)
                                                                                                                                  ttCTTTATTTTTTGCCGgggactgactccaacttattgatcgtgttttatgttcagataatgcccgatgactttgtcatgcagcgccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca                   >  5:38956‑M2/1‑17 (MQ=255)
                                                                                                                                     atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga                            <  4:104344‑M1/130‑1 (MQ=255)
                                                                                                                                     atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt                <  7:296917‑M1/142‑1 (MQ=255)
                                                                                                                                        aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg            <  6:334943‑M2/149‑139 (MQ=255)
                                                                                                                                        aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                             <  8:231399‑M2/68‑58 (MQ=255)
                                                                                                                                          cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac          <  3:282161‑M1/148‑1 (MQ=255)
                                                                                                                                          cTTGTGCCGCAAATAAATATCTTTTCATAAAATTATCCAGAAAAGACGCGGCATATAGACCTATTTACAACGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTATGCTgacgac          >  8:288953‑M1/2‑149 (MQ=255)
                                                                                                                                           ttGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAcc         >  7:163690/1‑149 (MQ=255)
                                                                                                                                                ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCa    <  6:247330/149‑1 (MQ=255)
                                                                                                                                                ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCATATTTACACCTATGATTTCGCAGAACGTTAGGTTAAAACTTCCTGATTCATTTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCtttaa    >  2:355658/1‑147 (MQ=255)
                                                                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaaagacagcgacttccgtcccagccgtgcccggtgctgcctcagattcaggttatgccgctcaatt  <  5:49743‑M2/149‑149 (MQ=255)
                                                                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaatt  <  2:28929‑M2/149‑149 (MQ=255)
                                                                                                                                                  gccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac          >  2:176905/1‑141 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGT  >  NC_000913/1292893‑1293187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.