New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1733711 =NA (NA)9 (0.270) 8/232 2.8 NA intergenic (+8/+43) lhr/grxD putative ATP‑dependent helicase/glutaredoxin‑4
?NC_000913 1733741 = NA (NA)intergenic (+38/+13) lhr/grxD putative ATP‑dependent helicase/glutaredoxin‑4

CGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAA  >  NC_000913/1733568‑1733853
                                                                                                                                               |                                                                                                                                              
cGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGAc                                                                                                                                           <  5:92356/149‑1 (MQ=255)
 gCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACg                                                                                                                                          >  6:33552/1‑149 (MQ=255)
       gttgacggcgagctggtcggcggttgtgatatcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGc                                                                                                                                     <  7:104273‑M1/12‑1 (MQ=255)
       cGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACGGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATg                                                                                                                                      <  5:33552/147‑1 (MQ=255)
       cGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGcc                                                                                                                                    >  5:138693/1‑149 (MQ=255)
           gcgAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGtt                                                                                                                                <  6:138693/149‑1 (MQ=255)
                  gctggtcggcggttgtgatatcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATcc                                                                                                                         >  2:21735‑M1/126‑149 (MQ=255)
                     gCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTAGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTc                                                                                                                      <  4:44889/149‑1 (MQ=255)
                            tttACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                               >  6:149235/1‑149 (MQ=255)
                              tACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGc                                                                                                              <  2:159954/148‑1 (MQ=255)
                                    aaCAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACg                                                                                                        >  4:70531/1‑148 (MQ=255)
                                     atcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa                                                                                                                     >  1:19802‑M1/107‑134 (MQ=255)
                                     atcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa                                                                                                                     <  2:19802‑M1/28‑1 (MQ=255)
                                      cAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGc                                                                                                                                     <  3:50760/117‑1 (MQ=255)
                                      cAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGc                                                                                                                                     >  4:50760/1‑117 (MQ=255)
                                          aGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGattatt                                                                                                 <  3:70531/149‑1 (MQ=255)
                                           gTGAATGATCTACCGGTCCGGCAACCGCCGCTGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATACGTCAGTATTGCCGGACGGATTATTc                                                                                                >  8:119103/1‑149 (MQ=255)
                                             gAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                               <  4:15270/148‑1 (MQ=255)
                                               aaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa                                                                                                                     >  8:96577‑M1/97‑124 (MQ=255)
                                               aaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa                                                                                                                     <  7:96577‑M1/28‑1 (MQ=255)
                                                             cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc                                                                                 >  1:74253/1‑146 (MQ=255)
                                                             cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc                                                                                 <  2:74253/146‑1 (MQ=255)
                                                             cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGa                                                                              >  6:133158/1‑149 (MQ=255)
                                                                cAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACtt                                                                           <  5:149235/149‑1 (MQ=255)
                                                                       cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                               <  5:13098/106‑1 (MQ=255)
                                                                       cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg                                                                                                               >  6:13098/1‑106 (MQ=255)
                                                                       agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat                                                                                                     <  3:59022‑M1/44‑1 (MQ=255)
                                                                       agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat                                                                                                     >  4:59022‑M1/73‑116 (MQ=255)
                                                                             ttACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCgg                                                                >  4:67465/1‑147 (MQ=255)
                                                                                  aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                               <  5:33889‑M1/50‑1 (MQ=255)
                                                                                  aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc                                                                                               >  6:33889‑M1/62‑111 (MQ=255)
                                                                                     ctgcGTGAGGCGGGATTTTCAAGTTCGCCACAACGGCTGGATTGGGGATAGAGAAAGCACTGACGGATGCCAGTTCGCATCCGTCAGTATTGCAGGACGGAGTATTCCGCGTCCGGCGCTTCAGACTTGTATTTAGCGGCAGTTGCt                                                        <  6:82512/147‑1 (MQ=255)
                                                                                              gCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAgctg                                             >  3:46996/1‑149 (MQ=255)
                                                                                                           gTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCa                                <  4:46996/149‑1 (MQ=255)
                                                                                                                ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc                                                                                         <  6:15142/87‑1 (MQ=255)
                                                                                                                ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc                                                                                         >  5:15142/1‑87 (MQ=255)
                                                                                                                                   gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa             <  8:99349/144‑1 (MQ=255)
                                                                                                                                   gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa             >  7:99349/1‑144 (MQ=255)
                                                                                                                                    aTAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGatat       >  8:104273/1‑149 (MQ=255)
                                                                                                                                         gaAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACaa  >  1:20943/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                              
CGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAA  >  NC_000913/1733568‑1733853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.