| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1733711 = | NA (NA) | 9 (0.270) | 8/232 | 2.8 | NA | intergenic (+8/+43) | lhr/grxD | putative ATP‑dependent helicase/glutaredoxin‑4 |
| ? | NC_000913 | 1733741 = | NA (NA) | intergenic (+38/+13) | lhr/grxD | putative ATP‑dependent helicase/glutaredoxin‑4 | |||||
CGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAA > NC_000913/1733568‑1733853 | cGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGAc < 5:92356/149‑1 (MQ=255) gCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACg > 6:33552/1‑149 (MQ=255) gttgacggcgagctggtcggcggttgtgatatcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGc < 7:104273‑M1/12‑1 (MQ=255) cGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACGGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATg < 5:33552/147‑1 (MQ=255) cGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGcc > 5:138693/1‑149 (MQ=255) gcgAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGtt < 6:138693/149‑1 (MQ=255) gctggtcggcggttgtgatatcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATcc > 2:21735‑M1/126‑149 (MQ=255) gCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTAGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTc < 4:44889/149‑1 (MQ=255) tttACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg > 6:149235/1‑149 (MQ=255) tACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGc < 2:159954/148‑1 (MQ=255) aaCAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACg > 4:70531/1‑148 (MQ=255) atcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa > 1:19802‑M1/107‑134 (MQ=255) atcgtgatcgaaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa < 2:19802‑M1/28‑1 (MQ=255) cAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGc < 3:50760/117‑1 (MQ=255) cAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGc > 4:50760/1‑117 (MQ=255) aGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGattatt < 3:70531/149‑1 (MQ=255) gTGAATGATCTACCGGTCCGGCAACCGCCGCTGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATACGTCAGTATTGCCGGACGGATTATTc > 8:119103/1‑149 (MQ=255) gAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc < 4:15270/148‑1 (MQ=255) aaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa > 8:96577‑M1/97‑124 (MQ=255) aaatgtatcagcgtggcgaactgcagcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCa < 7:96577‑M1/28‑1 (MQ=255) cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc > 1:74253/1‑146 (MQ=255) cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTc < 2:74253/146‑1 (MQ=255) cGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGa > 6:133158/1‑149 (MQ=255) cAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACtt < 5:149235/149‑1 (MQ=255) cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg < 5:13098/106‑1 (MQ=255) cGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTg > 6:13098/1‑106 (MQ=255) agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat < 3:59022‑M1/44‑1 (MQ=255) agcagctgatcaaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGat > 4:59022‑M1/73‑116 (MQ=255) ttACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCgg > 4:67465/1‑147 (MQ=255) aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc < 5:33889‑M1/50‑1 (MQ=255) aaagaaactgccgctaaatacaagtctgaagagccggacgcggaataatccgtcctgcaatACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc > 6:33889‑M1/62‑111 (MQ=255) ctgcGTGAGGCGGGATTTTCAAGTTCGCCACAACGGCTGGATTGGGGATAGAGAAAGCACTGACGGATGCCAGTTCGCATCCGTCAGTATTGCAGGACGGAGTATTCCGCGTCCGGCGCTTCAGACTTGTATTTAGCGGCAGTTGCt < 6:82512/147‑1 (MQ=255) gCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAgctg > 3:46996/1‑149 (MQ=255) gTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCa < 4:46996/149‑1 (MQ=255) ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc < 6:15142/87‑1 (MQ=255) ccACAAGGGCTTGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTcc > 5:15142/1‑87 (MQ=255) gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa < 8:99349/144‑1 (MQ=255) gATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCa > 7:99349/1‑144 (MQ=255) aTAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGatat > 8:104273/1‑149 (MQ=255) gaAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACaa > 1:20943/1‑149 (MQ=255) | CGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACGCTGATACATTTCGATCACGATATCACAA > NC_000913/1733568‑1733853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |