BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3750797	89 (1.130)	3 (0.040)	3/244	NT	3.4%	intergenic (+16/+16)	sgbE/ysaC	L‑ribulose‑5‑phosphate 4‑epimerase/pseudogene
*	?	NC_000913	= 3750803	89 (1.200)	3 (0.040)	3/244	NT	3.4%	intergenic (+22/+10)	sgbE/ysaC	L‑ribulose‑5‑phosphate 4‑epimerase/pseudogene
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

CTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCGACAACGTC  >  NC_000913/3750653‑3750944

cTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCa                                                                                                                                                 >  2:195405/1‑149 (MQ=255)

cTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCa                                                                                                                                                 >  5:121737/1‑149 (MQ=255)

 tCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCAt                                                                                                                                                >  6:59935/1‑149 (MQ=255)

    aagaaTGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCgc                                                                                                                                             <  3:191804‑M2/149‑3 (MQ=255)

      gaaTGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCgccc                                                                                                                                           >  4:191804‑M2/1‑145 (MQ=255)

               tataTGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTAc                                                                                                                                  >  2:130694/1‑149 (MQ=255)

                atatGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGACCTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTAc                                                                                                                                  >  5:75953/1‑148 (MQ=255)

                  atGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGaa                                                                                                                               >  1:116868/1‑149 (MQ=255)

                    gggTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAAt                                                                                                                              <  5:107126/148‑1 (MQ=255)

                       tCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGat                                                                                                                          <  1:43777/149‑1 (MQ=255)

                         tATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGatat                                                                                                                        >  2:4034/1‑149 (MQ=255)

                           ttCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATg                                                                                                                       <  1:4034/148‑1 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATACGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTc                                                                                                                    <  6:10865/148‑1 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAAtt                                                                                                                             <  4:93062/139‑1 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAAtt                                                                                                                             >  3:93062/1‑139 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   >  7:83695/1‑149 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   >  8:201101/1‑149 (MQ=255)

                              tcGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   >  3:287227/1‑149 (MQ=255)

                               cgcgCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCt                                                                                                                  >  8:276203/1‑149 (MQ=255)

                                gcgcCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   <  4:42118/147‑1 (MQ=255)

                                  gcCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGc                                                                                                               <  6:121737/149‑1 (MQ=255)

                                  gcCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGc                                                                                                               >  2:116952/1‑149 (MQ=255)

                                   ccAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCt                                                                                                              >  3:21998/1‑149 (MQ=255)

                                    cAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTg                                                                                                             <  3:215825/149‑1 (MQ=255)

                                        ttGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTGCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAAc                                                                                                         >  5:165705/1‑149 (MQ=255)

                                          gcgcCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCgccccggcgtgagggattactgcccgtaataggcattg                                                                                                         >  2:60218‑M2/1‑109 (MQ=255)

                                           cgccgcAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAAcgcc                                                                                                      <  7:201101/149‑1 (MQ=255)

                                             ccgcAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGa                                                                                                                           >  8:196348/1‑126 (MQ=255)

                                             ccgcAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGa                                                                                                                           <  7:196348/126‑1 (MQ=255)

                                                cAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATTGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTc                                                                                                 <  4:287227/149‑1 (MQ=255)

                                                 aGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTcc                                                                                                <  2:116868/149‑1 (MQ=255)

                                                   cTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTaa                                                                                                          >  8:151075/1‑137 (MQ=255)

                                                   cTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTaa                                                                                                          <  7:151075/137‑1 (MQ=255)

                                                    tCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCgatgaagccccggcgtgagggattactgcccgtaataggcattggc                                                                                                       <  1:257184‑M1/139‑47 (MQ=255)

                                                    tCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCgatgaagccccggcgtgagggattactgcccgtaataggcattggc                                                                                                       >  2:257184‑M1/1‑93 (MQ=255)

                                                    tCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCCGCACTACGCATTGATATGATCCTTGCTGTAACGCCGCTTCCACg                                                                                             >  5:223756/1‑149 (MQ=255)

                                                     cccTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACgc                                                                                            >  8:191358/1‑149 (MQ=255)

                                                      ccTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGAACTACGACTTGATATGTTCCTTGCTGTAACGCCGCTTCCACcct                                                                                           >  5:230301/1‑149 (MQ=255)

                                                          cGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACgctgc                                                                                         <  6:248634/147‑1 (MQ=255)

                                                          cGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGctgctg                                                                                       <  6:63403/149‑1 (MQ=255)

                                                              ggcaaaCGCACCGCTGGCTAACCCCTTACTGCCTCACCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCGGCTGGc                                                                                     <  6:210601/144‑1 (MQ=255)

                                                                 aaaCGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTa                                                                                 >  4:30783/1‑148 (MQ=255)

                                                                 aaaCGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATT‑ATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTaaa                                                                               >  7:46090/1‑149 (MQ=255)

                                                                  aaCGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTaaa                                                                               >  7:368729/1‑149 (MQ=255)

                                                                   aCGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAAc                                                                              >  2:48019/1‑149 (MQ=255)

                                                                    cGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAAcc                                                                             <  1:195405/149‑1 (MQ=255)

                                                                         tgctgGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTAt                                                                        >  5:349613/1‑149 (MQ=255)

                                                                           ctgGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGt                                                                      <  1:116952/149‑1 (MQ=255)

                                                                           ctgGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATAAGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGt                                                                      >  4:275646/1‑149 (MQ=255)

                                                                              gATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGttt                                                                    <  1:48019/148‑1 (MQ=255)

                                                                                    cACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGaaa                                                              >  3:254353/1‑148 (MQ=255)

                                                                                     aCTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACTCCGGGGCTTCCTCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCGTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGaaaaa                                                            <  6:75953/149‑1 (MQ=255)

                                                                                     aCTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGaaaaa                                                            >  8:190163/1‑149 (MQ=255)

                                                                                     aCTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGaaaaa                                                            <  5:59935/149‑1 (MQ=255)

                                                                                      cTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTg                                                                                                                <  2:177985/96‑1 (MQ=255)

                                                                                      cTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTg                                                                                                                >  1:177985/1‑96 (MQ=255)

                                                                                         ccTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATc                                                          <  1:130694/147‑1 (MQ=255)

                                                                                          cTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGc                                                       >  7:270409/1‑149 (MQ=255)

                                                                                           tGCGTAAGCATGGCGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTAATAGCCCCGGCCCTACCAATTGATAAGTACCTTGCAGTAACCCCCCTTACACCCATCTGGCGTTAAACCAGTAAGTTTCAGAAAAATCTTcc                                                      >  8:55502/1‑149 (MQ=255)

                                                                                            gCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCg                                                     >  1:89180/1‑149 (MQ=255)

                                                                                               tAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   >  3:88388/1‑84 (MQ=255)

                                                                                               tAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTcc                                                                                                                   <  4:88388/84‑1 (MQ=255)

                                                                                               tAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGa                                                   >  3:6422/1‑148 (MQ=255)

                                                                                                 aGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGaaa                                                 <  8:270409/148‑1 (MQ=255)

                                                                                                  gCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGaaa                                                 >  4:146177/1‑147 (MQ=255)

                                                                                                  gCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACACCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGaaa                                                 >  3:203705/1‑147 (MQ=255)

                                                                                                   cATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAg                                              <  8:368729/149‑1 (MQ=255)

                                                                                                     tGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGcc                                            <  3:30783/149‑1 (MQ=255)

                                                                                                         gCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCgccccggcgtgagggattactgcccgtaataggcattggccccatgcttacgcaggtagtgcttatccagcagttcgttttgcatcgcaggga                                                  <  1:257184‑M2/139‑94 (MQ=255)

                                                                                                         gCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCgccccggcgtgagggattactgcccgtaataggcattggccccatgcttacgcaggtagtgcttatccagcagttcgttttgcatcgcaggga                                                  >  2:257184‑M2/1‑46 (MQ=255)

                                                                                                             aTGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGc                                             <  8:204443/140‑1 (MQ=255)

                                                                                                             aTGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGc                                             >  7:204443/1‑140 (MQ=255)

                                                                                                               gCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCAtt                                   >  6:76641/1‑148 (MQ=255)

                                                                                                                       cGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTa                           <  7:351167/148‑1 (MQ=255)

                                                                                                                       cGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTAt                          >  5:183604/1‑149 (MQ=255)

                                                                                                                           cAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCa                      <  1:170537/149‑1 (MQ=255)

                                                                                                                             gTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATg                    >  8:59913/1‑149 (MQ=255)

                                                                                                                             gTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATg                    <  7:190163/149‑1 (MQ=255)

                                                                                                                             gTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATg                    >  6:321710/1‑149 (MQ=255)

                                                                                                                             gTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACACCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATg                    <  4:203705/149‑1 (MQ=255)

                                                                                                                              tAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATgg                   <  4:21998/149‑1 (MQ=255)

                                                                                                                              tAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATgg                   <  3:146177/149‑1 (MQ=255)

                                                                                                                              tAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATT‑ATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGa                  <  8:46090/149‑1 (MQ=255)

                                                                                                                                aTCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAg                 <  4:6422/149‑1 (MQ=255)

                                                                                                                                aTCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAg                 >  4:102266/1‑149 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATgg                   >  6:315565/1‑144 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATgg                   <  5:315565/144‑1 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGc                <  2:125709/147‑1 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGc                >  1:125709/1‑147 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAg              >  4:234208/1‑149 (MQ=255)

                                                                                                                                   ccTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAg              >  1:289623/1‑149 (MQ=255)

                                                                                                                                    cTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAgg             <  3:275646/149‑1 (MQ=255)

                                                                                                                                    cTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAgg             >  2:99201/1‑149 (MQ=255)

                                                                                                                                     tCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGc            >  2:221768/1‑149 (MQ=255)

                                                                                                                                       aCGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCg          >  4:96423/1‑149 (MQ=255)

                                                                                                                                         gCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCGAc        <  7:55502/149‑1 (MQ=255)

                                                                                                                                             gggCgatgaagccccggcgtgagggattactgcccgtaataggcattggccccatgcttacgcaggtagtgcttatccagcagttcgttttgcatcgcagggagctgcggcgcaagctggcgcgagaatagacccatataggcgcattc    >  4:191804‑M1/1‑4 (MQ=255)

                                                                                                                                              ggCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCGACAACGt   <  7:59913/149‑1 (MQ=255)

                                                                                                                                               gCgatgaagccccggcgtgagggattactgcccgtaataggcattggccccatgcttacgcaggtagtgcttatccagcagttcgttttgcatcgcagggagctgcggcgcaagctggcgcgagaatagacccatataggcgcattctt  <  3:191804‑M1/149‑148 (MQ=255)

                                                                                                                                               gCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCGACAACGTc  >  7:251744/1‑149 (MQ=255)

CTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAATCCCTCACGCCGGGGCTTCATCGCCCCGGCACTACGAATTGATATGTTCCTTGCTGTAACGCCGCTTCCACGCTGCTGGCGTTAAACCAGTATGTTTCTGAAAAATCTGCCGGAAATAGCCAACGTCATTAAACCGTATTGCATGGAGCAGGCCGACAACGTC  >  NC_000913/3750653‑3750944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.