Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,335,762 IS5 (–) +4 bp intergenic (+304/‑66) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1335762 =0 (0.000)31 (0.900) 28/266 0.3 100% intergenic (+304/‑69) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 13357650 (0.000)41 (1.190) 36/266 0.1 100% intergenic (+307/‑66) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

TTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTA  >  NC_000913/1335614‑1335895
                                                                                                                                                    |                                                                                                                                     
ttttCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGt                                                                                                                                       <  7:40623/149‑1 (MQ=255)
      aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTgtgt                                                                                                                                 <  5:140221‑M1/7‑1 (MQ=255)
        gTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTAGggaag                                                                                                                               >  4:68848‑M1/1‑144 (MQ=255)
         tCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGttt                                                                                                                                     >  6:151213/1‑142 (MQ=255)
         tCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGttt                                                                                                                                     <  5:151213/142‑1 (MQ=255)
            aTGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgc                                                                                                                           >  2:37453‑M1/1‑140 (MQ=255)
               tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgtg                                                                                                                                  >  8:85457‑M1/134‑139 (MQ=255)
               tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgtg                                                                                                                                  <  7:85457‑M1/6‑1 (MQ=255)
                 ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAata                                                                                                                      <  7:4933‑M1/18‑1 (MQ=255)
                       ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                 <  4:53111‑M1/148‑20 (MQ=255)
                                 ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttc                                                                                                      >  6:32164‑M1/1‑119 (MQ=255)
                                 ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaa                                                                                                                        <  4:21505‑M1/131‑13 (MQ=255)
                                 ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaa                                                                                                                        >  3:21505‑M1/1‑119 (MQ=255)
                                  tctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttct                                                                                                     >  1:168122‑M1/1‑118 (MQ=255)
                                    ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt                                                                                                     <  6:82244‑M1/35‑1 (MQ=255)
                                      gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                  <  7:20728‑M1/148‑35 (MQ=255)
                                      actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCa                                                                                                   >  6:83021‑M1/111‑147 (MQ=255)
                                      actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                  >  6:140221‑M1/111‑148 (MQ=255)
                                          aTTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctga                                                                                              <  5:32164‑M1/148‑39 (MQ=255)
                                             aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaacttccTTTGTGTTATCTTTAATATTCACCCTGAAGATAATCAGGGCTTc                                                                                            >  8:4933‑M1/104‑147 (MQ=255)
                                                 aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca                                                                                      >  1:6230‑M1/1‑103 (MQ=255)
                                                        ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa                                                                                >  5:82244‑M1/93‑148 (MQ=255)
                                                        cTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaa                                                                                                                        <  3:123776‑M1/108‑13 (MQ=255)
                                                        cTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaa                                                                                                                        >  4:123776‑M1/1‑96 (MQ=255)
                                                         ttGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                <  3:527‑M1/147‑53 (MQ=255)
                                                         ttGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                >  4:527‑M1/1‑95 (MQ=255)
                                                              cccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                         >  7:82911‑M1/1‑90 (MQ=255)
                                                                 gCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                      <  2:168122‑M1/149‑63 (MQ=255)
                                                                            tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt                                                            <  5:82311‑M1/76‑1 (MQ=255)
                                                                               tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAc                                                        <  1:29061‑M1/80‑1 (MQ=255)
                                                                                 atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAcc                                                       >  6:82311‑M1/68‑148 (MQ=255)
                                                                                  tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAccc                                                      <  3:103145‑M1/82‑1 (MQ=255)
                                                                                  aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgc                                                                                                                           <  6:53562‑M1/79‑10 (MQ=255)
                                                                                  aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgc                                                                                                                           >  5:53562‑M1/1‑70 (MQ=255)
                                                                                   tttgctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                    <  3:68848‑M1/149‑81 (MQ=255)
                                                                                    ttgctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                   >  3:80054‑M1/1‑68 (MQ=255)
                                                                                            ccACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                            <  7:93517‑M1/148‑89 (MQ=255)
                                                                                             cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                          >  3:113066‑M1/1‑59 (MQ=255)
                                                                                             cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                          <  4:113066‑M1/117‑59 (MQ=255)
                                                                                              acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                          <  8:43760‑M1/100‑43 (MQ=255)
                                                                                              acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                          >  7:43760‑M1/1‑58 (MQ=255)
                                                                                               caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                        <  4:80054‑M1/149‑93 (MQ=255)
                                                                                                aaGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                       >  2:16317‑M1/1‑56 (MQ=255)
                                                                                                aaGGTTTCTCCTCTTTTATCAATTTGGGTTGTTACCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaatccttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                       >  4:134111‑M1/1‑56 (MQ=255)
                                                                                                   ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                              >  7:63543‑M1/50‑107 (MQ=255)
                                                                                                   ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                              <  8:63543‑M1/58‑1 (MQ=255)
                                                                                                         atgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                              >  3:111069‑M1/44‑133 (MQ=255)
                                                                                                         atgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                              <  4:111069‑M1/90‑1 (MQ=255)
                                                                                                          ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                               <  1:37453‑M1/147‑102 (MQ=255)
                                                                                                          ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                     >  6:6711‑M1/1‑46 (MQ=255)
                                                                                                          ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                     <  5:6711‑M1/125‑80 (MQ=255)
                                                                                                          ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                      >  8:88329‑M1/1‑46 (MQ=255)
                                                                                                          ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                      <  7:88329‑M1/108‑63 (MQ=255)
                                                                                                               ttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                          >  2:166528‑M1/1‑41 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCtt                                                                                                                           >  8:63790‑M1/37‑49 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCtt                                                                                                                           >  8:62036‑M1/37‑49 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCtt                                                                                                                           <  7:62036‑M1/13‑1 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCtt                                                                                                                           <  7:63790‑M1/13‑1 (MQ=255)
                                                                                                                 aTCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                      >  6:103450‑M1/1‑39 (MQ=255)
                                                                                                                    aaTTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                    <  1:16317‑M1/148‑113 (MQ=255)
                                                                                                                         gggTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct              >  2:157629‑M1/1‑31 (MQ=255)
                                                                                                                          atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaa              <  1:107318‑M1/122‑1 (MQ=255)
                                                                                                                           gttgttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc            <  8:82911‑M1/149‑121 (MQ=255)
                                                                                                                            ttgttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg           <  1:157629‑M1/149‑122 (MQ=255)
                                                                                                                                  gacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCa     >  2:29061‑M1/19‑149 (MQ=255)
                                                                                                                                    aaaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa   <  1:166528‑M1/149‑130 (MQ=255)
                                                                                                                                     aaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag  >  6:141578‑M1/1‑19 (MQ=255)
                                                                                                                                       gttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                            >  5:135035‑M1/14‑105 (MQ=255)
                                                                                                                                       gttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                            <  6:135035‑M1/92‑1 (MQ=255)
                                                                                                                                           gcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGac                                  <  8:33109‑M1/102‑1 (MQ=255)
                                                                                                                                           gcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGac                                  >  7:33109‑M1/10‑111 (MQ=255)
                                                                                                                                               cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                     <  5:46853‑M1/99‑1 (MQ=255)
                                                                                                                                               cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                     >  6:46853‑M1/6‑104 (MQ=255)
                                                                                                                                               cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCaaa                   <  7:58450‑M1/117‑1 (MQ=255)
                                                                                                                                               cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCaaa                   >  8:58450‑M1/6‑122 (MQ=255)
                                                                                                                                                    |                                                                                                                                     
TTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTA  >  NC_000913/1335614‑1335895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.