| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4426591 | 34 (1.130) | 6 (0.230) | 6/196 | 2.2 | 15.4% | intergenic (+34/+37) | rplI/yjfZ | 50S ribosomal subunit protein L9/uncharacterized protein |
| ? | NC_000913 | = 4426592 | 36 (1.360) | intergenic (+35/+36) | rplI/yjfZ | 50S ribosomal subunit protein L9/uncharacterized protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4426484‑4426591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgccgaccaATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTACTACGTTTACGATCACTTTCGCGAATACTTCGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCA < NC_000913/4426592‑4426482 GCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTT > 5:89055/1‑121GCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTT < 6:89055/121‑1 CACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTA > 1:16502/1‑149 AGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTACTACGTTTA < 2:16502/149‑1 TTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTACTACGTTTACGAT > 1:57564/1‑93 TTCGTTATTCAACGAGACGTAAAAACGCCGACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTACTACGTTTACGAT < 2:57564/93‑1 GACCAATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTAAGCTACTACGTTTACGATCACTTTCGCGAATACTTCGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCA > 6:171075/1‑116 GCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAATTCGTTATTCAACGAGACGTAAAAACGCCGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4426484‑4426591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacgccgaccaATGGTCGGCGTTTTTACGTCTCGTTGAATAACGAATTATTCAGCTACTACGTTTACGATCACTTTCGCGAATACTTCGCTGTGAACCTGGAAGCTCACTTCGTGTTCGCCA < NC_000913/4426592‑4426482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |