| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1941819 = | 30 (1.000) | 8 (0.290) | 8/206 | 1.9 | 23.2% | coding (765/933 nt) | znuA | zinc ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1941845 = | 25 (0.900) | coding (739/933 nt) | znuA | zinc ABC transporter periplasmic binding protein | |||||
GTTGGCTAATTGACTCAGGAATTCTGAATAGCTTGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGC > NC_000913/1941681‑1941921 | gTTGGCTAATTGACTCAGGAATTCTGAATAGCTTGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCaaaaa < 4:95410/146‑1 (MQ=255)gTTGGCTAATTGACTCAGGAATTCTGAATAGCTTGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCaaaaa > 3:95410/1‑146 (MQ=255) cTTGTTTTACCCAGTTTGATATTCGTCCCCAGTGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCa < 8:84400/119‑1 (MQ=255) tatttcgaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcatcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTgtgt < 1:111646‑M1/39‑1 (MQ=255) tatttcgaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTgtgt > 2:111646‑M1/107‑145 (MQ=255) gaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCaaaaa > 7:25069‑M1/101‑108 (MQ=255) gaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCaaaaa < 8:25069‑M1/8‑1 (MQ=255) gATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCt > 2:147247/1‑149 (MQ=255) atatTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTg < 1:147247/149‑1 (MQ=255) cAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCt < 8:14582/104‑1 (MQ=255) cAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCt > 7:14582/1‑104 (MQ=255) tCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCGCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAAtctc < 3:131376/149‑1 (MQ=255) ttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGc < 3:3991‑M1/25‑1 (MQ=255) ttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGc > 4:3991‑M1/61‑85 (MQ=255) gAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAg < 2:26513/57‑1 (MQ=255) gAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAg > 1:26513/1‑57 (MQ=255) cctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCttt < 7:85574‑M1/21‑1 (MQ=255) cctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCttt > 8:85574‑M1/56‑76 (MQ=255) gATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa < 8:38966/129‑1 (MQ=255) gATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa > 7:38966/1‑129 (MQ=255) tCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCAt < 8:27331/96‑1 (MQ=255) tCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCAt > 7:27331/1‑96 (MQ=255) ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAACCGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGc < 3:99192/147‑1 (MQ=255) ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCa < 3:24061/93‑1 (MQ=255) ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCa > 4:24061/1‑93 (MQ=255) ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGc > 4:99192/1‑147 (MQ=255) cctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGCTcaa < 6:141143‑M1/29‑1 (MQ=255) cctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGCTTTTTGCTcaa > 5:141143‑M1/44‑72 (MQ=255) tCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATg > 6:64397/1‑93 (MQ=255) tCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATg < 5:64397/93‑1 (MQ=255) gACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTCGCTCAACCAACTGTGTTCTTATTTCATGTaa > 7:106219/1‑90 (MQ=255) gACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTCGCTCAACCAACTGTGTTCTTATTTCATGTaa < 8:106219/90‑1 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa < 6:169518/110‑1 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa > 5:169518/1‑110 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAAt < 4:37480/126‑1 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAAt > 3:37480/1‑126 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGAcc > 7:50636/1‑130 (MQ=255) tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGAcc < 8:50636/130‑1 (MQ=255) tGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCaa < 4:94211/119‑1 (MQ=255) tGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCaa > 3:94211/1‑119 (MQ=255) | GTTGGCTAATTGACTCAGGAATTCTGAATAGCTTGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGCTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGC > NC_000913/1941681‑1941921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |