New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 427762	27 (0.900)	6 (0.210)	6/208	2.3	16.6%	coding (116/1848 nt)	secD	SecYEG protein translocase auxillary subunit
	?	NC_000913	= 427779	35 (1.240)					coding (133/1848 nt)	secD	SecYEG protein translocase auxillary subunit
Rejected: Frequency below/above cutoff threshold.

TAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTC  >  NC_000913/427634‑427908                                                                                                                                 |                                                                                                                                                   tAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGc                                                                                                                                  <  4:69892‑M2/147‑2 (MQ=255)                               tttGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcaccagt                                                                                                                              <  4:136392‑M1/121‑23 (MQ=255)                               tttGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcaccagt                                                                                                                              >  3:136392‑M1/1‑99 (MQ=255)                                             tCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcaccagtgatc                                                                                                                          <  1:115116‑M1/111‑27 (MQ=255)                                             tCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcaccagtgatc                                                                                                                          >  2:115116‑M1/1‑85 (MQ=255)                                                        gtggtgATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACtcc                                                                         <  3:69892/149‑3 (MQ=255)                                                         tggtgATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAg                                                                                                            >  1:54652/1‑113 (MQ=255)                                                         tggtgATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAg                                                                                                            <  2:54652/113‑1 (MQ=255)                                                                        gTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGt                                                                                               >  3:19706/1‑111 (MQ=255)                                                                        gTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGt                                                                                               <  4:19706/111‑1 (MQ=255)                                                                         tCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTa                                                                                             >  1:117094/1‑112 (MQ=255)                                                                         tCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTa                                                                                             <  2:117094/112‑1 (MQ=255)                                                                           tgctgTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcacca                                                                                                                                <  1:137480‑M1/75‑21 (MQ=255)                                                                           tgctgTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGcggcgactccgcgcgcacca                                                                                                                                >  2:137480‑M1/1‑55 (MQ=255)                                                                              tgTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAagag                                                   >  2:133363/1‑149 (MQ=255)                                                                                     gcTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGtt                                                                                              >  1:115601/1‑99 (MQ=255)                                                                                     gcTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGtt                                                                                              <  2:115601/99‑1 (MQ=255)                                                                                     gcTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACaagaag                                                                                      >  4:45379/1‑107 (MQ=255)                                                                                     gcTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACaagaag                                                                                      <  3:45379/107‑1 (MQ=255)                                                                                      cTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAAc                                                                            >  7:42296/1‑116 (MQ=255)                                                                                      cTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAAc                                                                            <  8:42296/116‑1 (MQ=255)                                                                                         cccAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGaaaa                                                                                  >  8:17506/1‑107 (MQ=255)                                                                                         cccAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGaaaa                                                                                  <  7:17506/107‑1 (MQ=255)                                                                                           cAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTg                                      >  1:93280/1‑149 (MQ=255)                                                                                             aCCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAg                                                                                                            >  6:92108/1‑77 (MQ=255)                                                                                             aCCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAg                                                                                                            <  5:92108/77‑1 (MQ=255)                                                                                                tGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGc                                                                         >  7:72148/1‑109 (MQ=255)                                                                                                tGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGc                                                                         <  8:72148/109‑1 (MQ=255)                                                                                                      gTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGa                            <  1:133363/148‑1 (MQ=255)                                                                                                                        aGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGtt          <  2:93280/148‑1 (MQ=255)                                                                                                                         gATCACTGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagcagaccgatgacaatcaccacgatcagcatga                                              >  2:115116‑M2/1‑26 (MQ=255)                                                                                                                         gATCACTGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagcagaccgatgacaatcaccacgatcagcatga                                              <  1:115116‑M2/111‑86 (MQ=255)                                                                                                                          aTCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCtt                               >  5:148148/1‑125 (MQ=255)                                                                                                                          aTCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCtt                               <  6:148148/125‑1 (MQ=255)                                                                                                                           tCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGtt                                                                                              >  5:100895/1‑61 (MQ=255)                                                                                                                           tCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGtt                                                                                              <  6:100895/61‑1 (MQ=255)                                                                                                                             aCTGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagcagaccgatgacaatcaccacgatcagcatgacgtacttccacaaa                                <  4:136392‑M2/121‑100 (MQ=255)                                                                                                                             aCTGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagcagaccgatgacaatcaccacgatcagcatgacgtacttccacaaa                                >  3:136392‑M2/1‑22 (MQ=255)                                                                                                                               tGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagca                                                                            >  2:137480‑M2/1‑20 (MQ=255)                                                                                                                               tGGTGCGCGCGGAGTCGCCGccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagca                                                                            <  1:137480‑M2/75‑56 (MQ=255)                                                                                                                                 gcggcgactccgcgcgcaccagtgatctgaacagccggatcctcaccaaacaggttgggaagcgcatacagcagaccgatgacaatcaccacgatcagcatgacgtacttccacaaaggataacggtttaacacggcaattccctta  <  4:69892‑M1/147‑147 (MQ=255)                                                                                                                                 |                                                                                                                                                   TAAGGGAATTGCCGTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTC  >  NC_000913/427634‑427908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.