New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4459872104 (1.140)5 (0.060) 5/242 NT 4.8% intergenic (+17/+28) cybC/nrdG pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
?NC_000913 = 4459886 103 (1.220)intergenic (+31/+14) cybC/nrdG pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

TTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCATTT  >  NC_000913/4459726‑4460018
                                                                                                                                                  |                                                                                                                                                  
   cGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGGTGGCAAATGAAGGTATAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCTCAAGAAGTATCGTAAATTCCTCATTTCCCTGTTGCCt                                                                                                                                                <  1:199517/148‑1 (MQ=255)
   cGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTg                                                                                                                                               >  6:347346/1‑149 (MQ=255)
        ttCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTc                                                                                                                                          <  1:71525/149‑1 (MQ=255)
           tGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAgg                                                                                                                                       >  7:413828/1‑149 (MQ=255)
             gtcggtcAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg                                                                                                                                        <  4:372331/146‑1 (MQ=255)
             gtcggtcAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt                                                                                                                                      <  5:347346/148‑1 (MQ=255)
                 gtcAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacag                                                                                                                                 <  3:368125‑M2/149‑6 (MQ=255)
                  tcAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagg                                                                                                                                <  4:292254‑M2/149‑7 (MQ=255)
                    aGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGc                                                                                                                                                  <  7:25686/129‑1 (MQ=255)
                    aGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGc                                                                                                                                                  >  8:25686/1‑129 (MQ=255)
                         gacgacGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCTCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACtt                                                                                                                          <  8:402610/148‑1 (MQ=255)
                           cgacgCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatc                                                                                                                       <  6:136058/149‑1 (MQ=255)
                            gacgCGCTGAAGCTGGCTAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca                                                                                                                      <  5:100486/149‑1 (MQ=255)
                             acgCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCAAATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                                                                     >  5:347897/1‑149 (MQ=255)
                              cgcgCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                                                                    <  6:65955/149‑1 (MQ=255)
                              cgcgCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCAAAATAAGTATCGTTAATTACTCATTTCACTGTTGCCTGCACTCATGTAACAGGGAACTTatcatc                                                                                                                    >  6:284468/1‑149 (MQ=255)
                                 gcTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg                                                                                                                                        >  7:269859/1‑126 (MQ=255)
                                 gcTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg                                                                                                                                        <  8:269859/126‑1 (MQ=255)
                                 gcTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc                                                                                                                  >  2:144986/1‑148 (MQ=255)
                                 gcTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc                                                                                                                  >  5:359962/1‑148 (MQ=255)
                                  cTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCa                                                                                                                 >  6:117067/1‑148 (MQ=255)
                                     aaGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                                                                    >  5:199453/1‑142 (MQ=255)
                                     aaGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                                                                    <  6:199453/142‑1 (MQ=255)
                                     aaGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat                                                                                                              >  5:82025/1‑148 (MQ=255)
                                     aaGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat                                                                                                              <  5:117067/148‑1 (MQ=255)
                                     aaGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat                                                                                                              <  1:422793/148‑1 (MQ=255)
                                     aaGCTGGCAAATGAAGCTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCATGTAACAGGGAACTTATCATCGCaaa                                                                                                               <  8:161842/147‑1 (MQ=255)
                                       gCTGGCAAATGCAGGTAAAGTAAACGAAGCCCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACCAGAAGGATCGTTAATTCCTCATTTCCCAGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgat                                                                                                           <  8:425895/149‑1 (MQ=255)
                                        cTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgatg                                                                                                          <  3:299838/149‑1 (MQ=255)
                                          ggCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGACCTTATCATCGCAAATGATGca                                                                                                        >  3:272551/1‑149 (MQ=255)
                                           gCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAGACGACCCGCAAGTCATATAACAAGAGGGATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgatcccc                                                                                                       >  4:340704/1‑145 (MQ=255)
                                           gCAAAGGAACGTAAAGTAAAAGAAGCGCAGGCGGCTGCAGAGCAACTGAAAACGACCCGGAATTCATATCACAAGAAGTATCGTTTTTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcac                                                                                                       <  2:252605/149‑1 (MQ=255)
                                             aaaTGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcacca                                                                                                     >  3:190166/1‑149 (MQ=255)
                                                     gtaaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                                                                             >  7:402278/1‑149 (MQ=255)
                                                     gtaaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACAGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                                                                             >  4:76154/1‑149 (MQ=255)
                                                        aagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctg                                                                                          <  6:82025/149‑1 (MQ=255)
                                                             aaaGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTacctgagtgcaggcaacagggtaatgaggaattaacgatacttcttgtgatatgaattgcgg                                                                                      <  2:171453‑M1/148‑63 (MQ=255)
                                                             aaaGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgctgc                                                                                      <  5:412465/148‑1 (MQ=255)
                                                                   gcgcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgttt                                                                               <  6:73556‑M1/149‑70 (MQ=255)
                                                                   gcgcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc                                                                                 >  8:277041/1‑147 (MQ=255)
                                                                     gcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc                                                                                 >  1:51768/1‑145 (MQ=255)
                                                                           tgctgcAGAGCACCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAgg                                                                        >  6:341053/1‑148 (MQ=255)
                                                                             ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcaccac                                                                                                    <  6:213022/118‑1 (MQ=255)
                                                                             ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAgg                                                                        <  1:384666/146‑1 (MQ=255)
                                                                             ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGaa                                                                     <  4:55409/149‑1 (MQ=255)
                                                                              tgcAGAGCAACTGAAAACGCCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAg                                                                    >  8:298247/1‑149 (MQ=255)
                                                                                cAGAGCAACTGAAAACGCCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCCCTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAggg                                                                  >  4:362024/1‑149 (MQ=255)
                                                                                cAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTc                                                                                                                                          >  1:201071/1‑77 (MQ=255)
                                                                                cAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTc                                                                                                                                          <  2:201071/77‑1 (MQ=255)
                                                                                cAGAGCAAATGAAAACGAACAGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCTCCAGATCAGGGAAgg                                                                   <  5:284468/148‑1 (MQ=255)
                                                                                     cAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCttt                                                             >  4:393377/1‑149 (MQ=255)
                                                                                      aaCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtttt                                                            <  8:220888/149‑1 (MQ=255)
                                                                                       aCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtttt                                                            >  4:145900/1‑148 (MQ=255)
                                                                                       aCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtttt                                                            >  4:151696/1‑148 (MQ=255)
                                                                                         tGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTaaa                                                         >  1:356338/1‑149 (MQ=255)
                                                                                           aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTaaa                                                         <  3:393377/147‑1 (MQ=255)
                                                                                           aaaaCGACCCGCAATTCATATCACAAGAAGTAACGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGAAAATGATGAACCACCTGATTGCTGATGCAGCGCCAGATCAGGGAAGGGTCTTTTAAATc                                                       >  5:63863/1‑149 (MQ=255)
                                                                                            aaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATcc                                                      >  6:194240/1‑149 (MQ=255)
                                                                                            aaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACAACCTGATTGCTGCTGCCGCGCCAGATCAGGGAACGGTCTTTTAAAAcc                                                      >  2:131430/1‑149 (MQ=255)
                                                                                             aaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtt                                                              >  3:9678/1‑140 (MQ=255)
                                                                                             aaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCt                                                     <  5:191370/149‑1 (MQ=255)
                                                                                                gACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgttttcagttgctctgcagcagcctgcgcttct                                                  >  5:73556‑M2/1‑65 (MQ=255)
                                                                                                gACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGca                                                  <  2:185046/149‑1 (MQ=255)
                                                                                                   ccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGcaca                                                >  5:238901/1‑148 (MQ=255)
                                                                                                   ccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTACCCTGTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgttttcagttgctctgcagcagcctgcgcttcttt                                                <  2:171453‑M2/148‑87 (MQ=255)
                                                                                                    cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACaaa                                              <  7:222652/149‑1 (MQ=255)
                                                                                                     gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg                                                                                                                                        <  7:131650/58‑1 (MQ=255)
                                                                                                     gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg                                                                                                                                        >  8:131650/1‑58 (MQ=255)
                                                                                                       aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAAttt                                           >  8:419721/1‑149 (MQ=255)
                                                                                                           cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAg                                                                              >  2:87519/1‑110 (MQ=255)
                                                                                                           cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGcc                                        <  7:277041/148‑1 (MQ=255)
                                                                                                              atCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCAGCGCCAGATAAGGGAAGGGTCTTTTAAATCCTGCCCAAATTTGCCGTCg                                    >  5:62966/1‑149 (MQ=255)
                                                                                                                cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCgcc                                  >  1:359142/1‑147 (MQ=255)
                                                                                                                 acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGAc                                  >  5:387153/1‑148 (MQ=255)
                                                                                                                  caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCg                                    <  2:373887/145‑1 (MQ=255)
                                                                                                                  caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCg                                    >  1:373887/1‑145 (MQ=255)
                                                                                                                   aagaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAg                               <  5:341053/149‑1 (MQ=255)
                                                                                                                   aagaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAg                               >  2:63773/1‑149 (MQ=255)
                                                                                                                      aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCAc                            <  3:76154/149‑1 (MQ=255)
                                                                                                                      aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCAc                            <  6:387153/149‑1 (MQ=255)
                                                                                                                         tATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGtt                         <  7:298247/149‑1 (MQ=255)
                                                                                                                           tCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaa                       >  4:97464/1‑149 (MQ=255)
                                                                                                                           tCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaa                       >  6:77335/1‑149 (MQ=255)
                                                                                                                             gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaat                      >  7:53/1‑148 (MQ=255)
                                                                                                                                aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaa                   <  7:74322/148‑1 (MQ=255)
                                                                                                                                 aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaat                 <  3:151696/149‑1 (MQ=255)
                                                                                                                                  ttCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaatc                <  5:194240/149‑1 (MQ=255)
                                                                                                                                  ttCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaatc                <  2:51768/149‑1 (MQ=255)
                                                                                                                                  ttCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaatc                <  1:224044/149‑1 (MQ=255)
                                                                                                                                        aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCaacaac          <  3:107395/149‑1 (MQ=255)
                                                                                                                                         tttCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAAcc         >  6:282246/1‑149 (MQ=255)
                                                                                                                                          ttCCCTGTTACCTGAGTGCAGGCAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaat                 >  6:150676/1‑140 (MQ=255)
                                                                                                                                          ttCCCTGTTACCTGAGTGCAGGCAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTaatcaaat                 <  5:150676/140‑1 (MQ=255)
                                                                                                                                             ccTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgttttcagttgctctgcagcagcctgcgcttcttttactttaccttcatttgccagcttcagcgcgtcgtcaatctga     <  4:292254‑M1/149‑144 (MQ=255)
                                                                                                                                              cTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcgttttcagttgctctgcagcagcctgcgcttcttttactttaccttcatttgccagcttcagcgcgtcgtcaatctgac    <  3:368125‑M1/149‑145 (MQ=255)
                                                                                                                                              cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCAt    <  1:144986/149‑1 (MQ=255)
                                                                                                                                              cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCAt    >  6:94452/1‑149 (MQ=255)
                                                                                                                                               tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCAtt   >  5:325287/1‑149 (MQ=255)
                                                                                                                                               tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCAtt   >  5:224891/1‑149 (MQ=255)
                                                                                                                                                gTTGCCTGCACTCAGGTAACAGGGAAATTATCATCGCAAATGATGCAACACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCCCAAATTTGCCGTCGCCCAGCACGTTAATCAAATCAACAACATGCAttt  >  1:287851/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGACCAGCACGTTAATCAAATCAACAACCTGCATTT  >  NC_000913/4459726‑4460018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.