Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 886,431 G→A 6.1% S303S (AGC→AGT ybjJ ← putative drug efflux MFS transporter, inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913886,4310GA 6.1% 206.5 / 2.6 65S303S (AGC→AGTybjJputative drug efflux MFS transporter, inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (30/31);  new base A (2/2);  total (32/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01

GAGGAAAGCCAGATAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGC  >  NC_000913/886284‑886578
                                                                                                                                                   |                                                                                                                                                   
gaGGAAAGCCAGATAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGgcgc                                                                                                                                                    >  5:189314/1‑149 (MQ=255)
        ccAGATAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCCGCGCCCCAGGCGCTATCGAc                                                                                                                                             >  2:284858/1‑148 (MQ=255)
        ccAGATAACCGGTCGTTGATACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACa                                                                                                                                            <  4:131711/149‑1 (MQ=255)
         cAGATAACCGGTCGTTGCTACCAGACTGAGGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACGCAGGCGCTATCGACaa                                                                                                                                           <  7:324557/149‑1 (MQ=255)
          aGATAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACaa                                                                                                                                           >  6:199417/1‑148 (MQ=255)
            aTAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCCGCGGGACGCCCAGCGAGGCCCCCCGTCCCCAGCGTACACCAGACACCCCCGCGCCCCAGGCACGATCGACaaaaa                                                                                                                                        >  5:57323/1‑149 (MQ=255)
            aTAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACaaaaa                                                                                                                                        <  1:380135/149‑1 (MQ=255)
            aTAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACaaaaa                                                                                                                                        <  3:223966/149‑1 (MQ=255)
                 cGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATc                                                                                                                                   >  3:264811/1‑149 (MQ=255)
                   gTCGTTGCTACCACACTGACGCGGGATGGTGCATCTGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGAGGGAAGCCCAGCGAGGCACACAGTCCCCAGAGTACAACACCCACACCAGCGACCCAGGCGCTATCGAAAAAAATAATCAg                                                                                                                                 >  2:416268/1‑149 (MQ=255)
                      gTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGccc                                                                                                                              <  6:189314/149‑1 (MQ=255)
                          cTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAAt                                                                                                                           <  3:106063/148‑1 (MQ=255)
                             ccACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATAccc                                                                                                                       <  1:339351/149‑1 (MQ=255)
                                cacTGACGCGTGTTGGTGCTTCGGGGCCGGTTTCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTGCCCAGAGTACAACAGACACCCCAGCGACCCAGGCACTATCGACAAAAATAATCAGCCCAATACCCAAc                                                                                                                    <  6:57323/149‑1 (MQ=255)
                                         gggTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCAt                                                                                                            >  7:23055/1‑148 (MQ=255)
                                         gggTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCAt                                                                                                            <  8:23055/148‑1 (MQ=255)
                                          ggTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTa                                                                                                          <  5:127469/149‑1 (MQ=255)
                                            ttGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGGCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGt                                                                                                        <  7:99373/149‑1 (MQ=255)
                                                tGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCAc                                                                                                    >  3:147858/1‑149 (MQ=255)
                                                  cATCGGGGGCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCAGCCAGTGCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGAGAAAAATAATCAGCCCAATACCCAACGCACCCATTAGTGCACTg                                                                                                  <  1:416268/149‑1 (MQ=255)
                                                  cATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCATGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTg                                                                                                  <  4:389440/149‑1 (MQ=255)
                                                  cATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATCCCCAACGCCCCCATTCGTGCACTg                                                                                                  >  4:340756/1‑149 (MQ=255)
                                                  cATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACt                                                                                                   <  5:199417/148‑1 (MQ=255)
                                                   aTCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCCGCGGGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCCACGCCCCCATTAGTGCACTgg                                                                                                 >  1:335526/1‑149 (MQ=255)
                                                    tCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCACTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCa                                                                                                             <  4:244820/136‑1 (MQ=255)
                                                    tCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCACTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCa                                                                                                             >  3:244820/1‑136 (MQ=255)
                                                           cGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAAcc                                                                                         <  7:151872/149‑1 (MQ=255)
                                                             gTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCAc                                                                                       >  1:371182/1‑149 (MQ=255)
                                                                   cTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAAc                                                                                 >  3:46739/1‑149 (MQ=255)
                                                                          cAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTg                                                                          <  3:284351/149‑1 (MQ=255)
                                                                           aGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTg                                                                          >  2:353584/1‑148 (MQ=255)
                                                                           aGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTCGCCCGACCCACGGCAACGCTACTg                                                                          >  6:264989/1‑148 (MQ=255)
                                                                               aTGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACg                                                                     <  1:353584/149‑1 (MQ=255)
                                                                                  gTCAGCGGGAAGCCCAGCGAGGCACCCAGGCCCCAGAGTACAACACACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGt                                                                   <  5:264989/148‑1 (MQ=255)
                                                                                    cAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACCCCCCAGCGCCCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTACCGGTCGa                                                                >  1:295327/1‑149 (MQ=255)
                                                                                     aGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGa                                                                <  4:147858/148‑1 (MQ=255)
                                                                                       cGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGCCACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATg                                                              >  3:149172/1‑148 (MQ=255)
                                                                                             gCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGAc                                                                            <  2:221513/128‑1 (MQ=255)
                                                                                             gCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGAc                                                                            >  1:221513/1‑128 (MQ=255)
                                                                                                cAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCACCGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTg                                                                          >  2:410804/1‑127 (MQ=255)
                                                                                                cAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTg                                                                          <  1:410804/127‑1 (MQ=255)
                                                                                                 aGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATTCCCAACGCCCCCATTAGTGCACTGGCCCGACCCACGGCAACGCGACTGTAACGGTCGATGAACCAAccgcc                                                   >  5:260178/1‑149 (MQ=255)
                                                                                                         aCCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGc                                           >  3:146881/1‑149 (MQ=255)
                                                                                                         aCCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGc                                           <  2:371182/149‑1 (MQ=255)
                                                                                                           ccAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGt                                         >  1:22248/1‑149 (MQ=255)
                                                                                                                 cccAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACg                                   <  4:146881/149‑1 (MQ=255)
                                                                                                                  ccAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACgg                                  >  5:274743/1‑149 (MQ=255)
                                                                                                                    agagTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCa                                                                                                             >  4:111860/1‑72 (MQ=255)
                                                                                                                    agagTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCa                                                                                                             <  3:111860/72‑1 (MQ=255)
                                                                                                                        tACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATcc                            <  1:380810/149‑1 (MQ=255)
                                                                                                                            acaGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAg                        >  6:16617/1‑149 (MQ=255)
                                                                                                                            acaGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCAAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAg                        <  5:329793/149‑1 (MQ=255)
                                                                                                                                   ccccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATa                                                                                                                          <  4:297958/44‑1 (MQ=255)
                                                                                                                                   ccccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATa                                                                                                                          >  3:297958/1‑44 (MQ=255)
                                                                                                                                   ccccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGCACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTaaaa                 >  2:66473/1‑149 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAgg                       <  7:172894/142‑1 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAgg                       >  8:172894/1‑142 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAg                        <  2:231061/141‑1 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAg                        >  1:231061/1‑141 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAAc                >  6:415357/1‑149 (MQ=255)
                                                                                                                                    cccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAAc                >  2:58775/1‑149 (MQ=255)
                                                                                                                                     ccAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAAcc               >  2:190290/1‑149 (MQ=255)
                                                                                                                                       aGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCgg             <  4:149172/149‑1 (MQ=255)
                                                                                                                                            cccAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGCCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCaa                                     <  7:362837/120‑1 (MQ=255)
                                                                                                                                            cccAGGCGCTAACGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGAACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCCATGATCCAACCGCCGGAGAAGCGGCCaa                                     >  8:362837/1‑120 (MQ=255)
                                                                                                                                                ggCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCa    <  4:264811/149‑1 (MQ=255)
                                                                                                                                                  cgcTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGc  <  1:58775/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GAGGAAAGCCAGATAACCGGTCGTTGCTACCACACTGACGCGGGTTGGTGCATCGGGGCCGGTATCGCTGGCGGCAGAAATGGTCAGCGGGAAGCCCAGCGAGGCACCCAGTCCCCAGAGTACAACAGACACCCCAGCGACCCAGGCGCTATCGACAAAAATAATCAGCCCAATACCCAACGCCCCCATTAGTGCACTGGCCCGAACCACGGCAACGCGACTGTAACGGTCGATGAACCAACCGCCGGTGAAGCGTCCAACGGTCATCCCCAGGGTAAAACCGGCATAAATCAGC  >  NC_000913/886284‑886578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: