Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 121 [0] [0] 122 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)121 (1.230) 91/278 0.0 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

Only 100 of 121 total aligned reads displayed.

AATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC  >  NC_000913/4001498‑4001788
                                                                                                                                                  |                                                                                                                                                
 aTGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc                                                                                                                                               >  4:166908‑M1/1‑146 (MQ=255)
       tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTACGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctt                                                                                                                                         >  2:133280‑M1/1‑140 (MQ=255)
        aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc                                                                                                                                           <  2:197215‑M1/146‑8 (MQ=255)
        aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc                                                                                                                                           >  1:197215‑M1/1‑139 (MQ=255)
         tGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc                                                                                                                                                 <  3:262058‑M1/139‑2 (MQ=255)
         tGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc                                                                                                                                                 >  4:262058‑M1/1‑138 (MQ=255)
            aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct                                                                                                                                    >  6:378975‑M1/1‑135 (MQ=255)
             ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt                                                                                                                                   <  1:114611‑M1/149‑16 (MQ=255)
             ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt                                                                                                                                   <  6:177464‑M1/149‑16 (MQ=255)
               gATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                                  <  8:171464‑M1/148‑17 (MQ=255)
               gATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTAATATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAATACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                                  <  1:115857‑M1/148‑17 (MQ=255)
                aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg                                                                                                                                 >  8:364411‑M1/1‑131 (MQ=255)
                   ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg                                                                                                                                 >  8:362264‑M1/1‑128 (MQ=255)
                     gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                               <  5:3449‑M1/145‑20 (MQ=255)
                      tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGGAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc                                                                                                                          <  8:292074‑M1/149‑25 (MQ=255)
                        gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                        <  7:120003‑M1/149‑27 (MQ=255)
                        gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                        <  5:378975‑M1/149‑27 (MQ=255)
                        gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg                                                                                                                         >  3:278643‑M1/1‑123 (MQ=255)
                          aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa                                                                                                                      <  3:341651‑M1/149‑29 (MQ=255)
                          aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                        >  1:102989‑M1/1‑121 (MQ=255)
                          aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                        >  6:218752‑M1/1‑121 (MQ=255)
                          aCCGGACGACGACGAGCGACTACGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggat                                                                                                                      <  1:133280‑M1/149‑29 (MQ=255)
                            cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                        >  1:207361‑M1/1‑119 (MQ=255)
                             ggccgacgacgagcgACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCATctccttcttcttctttgaagatgcggaagat                                                                                                                   <  1:4604‑M1/146‑32 (MQ=255)
                               acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca                                                                                                                 <  4:278643‑M1/149‑34 (MQ=255)
                                cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac                                                                                                                <  8:52567‑M1/149‑35 (MQ=255)
                                  acgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc                                                                                                              <  1:185919‑M1/149‑37 (MQ=255)
                                   cgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc                                                                                                             >  3:23602‑M1/1‑112 (MQ=255)
                                    gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGCCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                            >  4:263763‑M1/1‑111 (MQ=255)
                                     acgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg                                                                                                           <  7:206545‑M1/149‑40 (MQ=255)
                                        aGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa                                                                                                        <  6:285365‑M1/149‑43 (MQ=255)
                                         gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac                                                                                                       <  6:128642‑M1/149‑44 (MQ=255)
                                         gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaac                                                                                                       >  3:139435‑M1/1‑106 (MQ=255)
                                           gACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactc                                                                                                     <  3:38139‑M1/149‑46 (MQ=255)
                                                 gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                               <  2:163576‑M1/149‑52 (MQ=255)
                                                  cgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg                                                                                              <  2:207361‑M1/149‑53 (MQ=255)
                                                      ctatcTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCAGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcat                                                                                          <  5:233713‑M1/147‑57 (MQ=255)
                                                      cAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca                                                                                           <  6:19295‑M1/148‑56 (MQ=255)
                                                         tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                       >  2:298561‑M1/1‑90 (MQ=255)
                                                          cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac                                                                                      >  3:367954‑M1/1‑89 (MQ=255)
                                                           tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac                                                                                      >  8:354884‑M1/1‑88 (MQ=255)
                                                             aaCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                       <  7:376587‑M1/145‑60 (MQ=255)
                                                               cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc                                                                                 >  7:158525‑M1/1‑84 (MQ=255)
                                                                  ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                            <  4:168903‑M1/119‑39 (MQ=255)
                                                                  ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg                                                                                                            >  3:168903‑M1/1‑81 (MQ=255)
                                                                  ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt                                                                               <  2:393116‑M1/148‑68 (MQ=255)
                                                                    ccAGAGCCTGGCAACCCGCCCTGAACTGGAAGACATCGAAGCATCTGCACGTTTCTTTGAAGACGACGACGGCCTTCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggaatttaccatccgtga                                                                             <  1:43969‑M1/148‑70 (MQ=255)
                                                                         gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCATcaccttcttcttctttgaagatgcggaagatcacgccggtaactccactctggcacttaccatccgtgatggacg                                                                       >  3:270167‑M1/1‑74 (MQ=255)
                                                                          ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt                                                                      <  4:8860‑M1/149‑77 (MQ=255)
                                                                             ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctg                                                                   <  5:111655‑M1/149‑80 (MQ=255)
                                                                              gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                                  >  2:59365‑M1/1‑69 (MQ=255)
                                                                              gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                                  <  4:367954‑M1/149‑81 (MQ=255)
                                                                              gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                    <  7:354884‑M1/147‑79 (MQ=255)
                                                                              gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                                  <  6:271033‑M1/117‑49 (MQ=255)
                                                                               cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt                                                                 <  1:298561‑M1/149‑82 (MQ=255)
                                                                                 aCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACCTTTCTTTGAAGACGACGACGTCCTGCATctcctacttcttctttgaatatccggaagatcacgccggtaactccactgtcgcatttaccaaccgtgatggtcgactgtata                                                               >  5:353046‑M1/1‑66 (MQ=255)
                                                                                      cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctg                                                          <  3:383176‑M1/149‑89 (MQ=255)
                                                                                      cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtgtactctg                                                          >  7:317197‑M1/1‑61 (MQ=255)
                                                                                         ggAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                       <  3:166908‑M1/149‑92 (MQ=255)
                                                                                              tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcg                                                  >  3:358709‑M1/1‑53 (MQ=255)
                                                                                                gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                             >  4:380440‑M1/1‑51 (MQ=255)
                                                                                                gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                             <  3:380440‑M1/120‑70 (MQ=255)
                                                                                                gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                               <  8:354874‑M1/102‑52 (MQ=255)
                                                                                                gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                               >  7:354874‑M1/1‑51 (MQ=255)
                                                                                                      aTCGAAGCATCGGCACGTTTCTTTTAAGACGACGACGGCCTGCATatccttcttcttctttgaagatgcggaagatcacgccggtaactacactgtggcatttaccatccgtgatggtcgtctgtttactattcgtgagcgtgaacagc                                          >  4:243674‑M1/1‑45 (MQ=255)
                                                                                                      aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                          >  7:55008‑M1/1‑45 (MQ=255)
                                                                                                      aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                          >  3:186286‑M1/1‑45 (MQ=255)
                                                                                                        cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGTCCTGCATctcctacttcttatttgaagattcggaagatcacgacggtaactccactgaggcatttacgatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc                                        >  1:118477‑M1/1‑43 (MQ=255)
                                                                                                         gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                                  >  4:40721‑M1/1‑42 (MQ=255)
                                                                                                         gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt                                                                  <  3:40721‑M1/122‑81 (MQ=255)
                                                                                                         gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc                                                                                                                                           >  8:225073‑M1/1‑42 (MQ=255)
                                                                                                          aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgc                                      >  3:165216‑M1/1‑41 (MQ=255)
                                                                                                             cATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt                                   <  8:371255‑M1/149‑112 (MQ=255)
                                                                                                                  gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                                 >  7:194211‑M1/1‑33 (MQ=255)
                                                                                                                  gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                                 <  8:194211‑M1/82‑50 (MQ=255)
                                                                                                                      gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgta                          >  7:78372‑M1/1‑29 (MQ=255)
                                                                                                                         tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaccttcccgcttttagtctgtatcg                       >  6:245916‑M1/1‑26 (MQ=255)
                                                                                                                         tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcg                       >  6:91244‑M1/1‑26 (MQ=255)
                                                                                                                         tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc                        <  2:102989‑M1/148‑123 (MQ=255)
                                                                                                                          cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcg                       >  3:124641‑M1/1‑25 (MQ=255)
                                                                                                                           tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta                     >  4:65152‑M1/1‑24 (MQ=255)
                                                                                                                            ttGAAGCAGACGACGGCCTGCATctccttcttcttctttgaagttgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctttt                                  <  6:187‑M1/135‑113 (MQ=255)
                                                                                                                            ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactgcactgtggcatttaccatccgtgatggtcgtctggttactctgcgtgagcgtgaactgcccgctttt                                  >  5:187‑M1/1‑23 (MQ=255)
                                                                                                                            ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                    >  4:252683‑M1/1‑23 (MQ=255)
                                                                                                                            ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                    >  5:396201‑M1/1‑23 (MQ=255)
                                                                                                                            ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                             >  8:418227‑M1/1‑23 (MQ=255)
                                                                                                                            ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                             <  7:418227‑M1/140‑118 (MQ=255)
                                                                                                                             tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat                    <  5:218752‑M1/148‑127 (MQ=255)
                                                                                                                                aGACGACGACGGCCTGCATctccttcttcttcgttgaagatgcggaacatcacgccggtgactccactgtggcatttaccatccgtgatggtcggctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgt                >  4:1178‑M1/1‑19 (MQ=255)
                                                                                                                                    gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc            >  2:69899‑M1/1‑15 (MQ=255)
                                                                                                                                    gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc            >  4:37262‑M1/1‑15 (MQ=255)
                                                                                                                                    gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctttt                                  >  8:146850‑M1/1‑15 (MQ=255)
                                                                                                                                    gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctttt                                  <  7:146850‑M1/127‑113 (MQ=255)
                                                                                                                                      cgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                                  >  7:350482‑M1/1‑13 (MQ=255)
                                                                                                                                       gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgta         <  4:165216‑M1/149‑138 (MQ=255)
                                                                                                                                       gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccg           >  8:341088‑M1/1‑12 (MQ=255)
                                                                                                                                            ccTGCATctccttcttcttctttgaagatccggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagtgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtaggcag    >  8:440827‑M1/1‑7 (MQ=255)
                                                                                                                                             cTGCATctccttcttcttctttgaagatgcggaagatcacgcaggtttctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcttgagcgtgaactgcccgcttttcgtctgtatcgtaggcttgcccgtagccagt   >  1:216263‑M1/1‑6 (MQ=255)
                                                                                                                                                cATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtc  <  1:59365‑M1/147‑145 (MQ=255)
                                                                                                                                                cATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtc  <  8:78372‑M1/147‑145 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
AATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC  >  NC_000913/4001498‑4001788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: