New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120961886 (0.820)6 (0.060) 5/248 11.5 6.3% pseudogene (2/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
?NC_000913 2471897 = 101 (1.080)pseudogene (226/579 nt) yfdL pseudogene, CPS‑53 (KpLE1) prophage;Phage or Prophage Related
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 128 total aligned reads displayed.

GAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGC  >  NC_000913/2471750‑2472043
                                                                                                                                                   |                                                                                                                                                  
gAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAgg                                                                                                                                                   >  5:198954/1‑149 (MQ=255)
gAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAgg                                                                                                                                                   >  1:269328/1‑149 (MQ=255)
    aTCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGtttt                                                                                                                                               >  2:178209/1‑149 (MQ=255)
     tCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTc                                                                                                                                              <  4:343784/149‑1 (MQ=255)
       aaTTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCACTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCga                                                                                                                                            >  4:231188/1‑149 (MQ=255)
       aaTTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGCAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCga                                                                                                                                            <  1:66233/149‑1 (MQ=255)
         ttGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCgaga                                                                                                                                          <  7:269084/149‑1 (MQ=255)
              ccccATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtt                                                                                                                                     >  3:402395/1‑149 (MQ=255)
              ccccATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtt                                                                                                                                     <  4:78070/149‑1 (MQ=255)
              ccccATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtt                                                                                                                                     >  8:227894/1‑149 (MQ=255)
                      aataatTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCg                                                                                                                             >  4:50309/1‑149 (MQ=255)
                        taatTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTg                                                                                                                           <  3:174069/149‑1 (MQ=255)
                         aatTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGc                                                                                                                          >  3:352368/1‑149 (MQ=255)
                          atTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGcc                                                                                                                         <  2:27456/149‑1 (MQ=255)
                           ttAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATGAGGTATCTGATTCGCCCATGTCCCTACATTTCGTTTCGCCGCTTCTCACAAACCAAGGTTTTCGAGAGACTTATGCACCGTGCCg                                                                                                                        >  5:146721/1‑149 (MQ=255)
                           ttAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCg                                                                                                                        >  7:279413/1‑149 (MQ=255)
                              aaCCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTc                                                                                                                      >  5:262038/1‑148 (MQ=255)
                                  ggATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAAtt                                                                                                                 <  5:38810/149‑1 (MQ=255)
                                   gATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAAttt                                                                                                                <  4:284450/149‑1 (MQ=255)
                                         aaTTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATc                                                                                                          >  4:72965/1‑149 (MQ=255)
                                           tttttGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGc                                                                                                        <  4:248324/149‑1 (MQ=255)
                                                  tatCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTGCCTACATTTCTTTTAGCCGCTTCTCCGAAACCAAGGTTTTCGAGAGCCTTGTTCTCAGTGCCGTCCAATGTGATATAGACACACgg                                                                                                 >  8:436066/1‑149 (MQ=255)
                                                     ccAGGAACTGAAGCAGAATGAATAATACTACCCATATCAGGTATATGATTCGCCCCTGTCCCTACATTTCTTTTAGCCTCTTCTCCCAAACCCAGGTTTTCGAGAGCCTGTTGCACCGTGCCGTCCAATTTGATATCGCCTAACGGAtt                                                                                              <  6:146721/149‑1 (MQ=255)
                                                      cAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTc                                                                                             >  6:162381/1‑149 (MQ=255)
                                                      cAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTc                                                                                             <  1:178209/149‑1 (MQ=255)
                                                       aGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCt                                                                                            >  5:89645/1‑149 (MQ=255)
                                                          aaCTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc                                                                                         <  6:262038/149‑1 (MQ=255)
                                                           aCTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCACACCAAGGTTTTCGAGTGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCg                                                                                        <  7:395701/149‑1 (MQ=255)
                                                            cTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCgg                                                                                       >  3:367554/1‑149 (MQ=255)
                                                             tGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGAAACTCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGCTTTTCGAGAGCCTTTTGCACCGTCCCGTCCAAGTTGATATCGCAAAACGGATTCTTGCGGc                                                                                      >  8:224616/1‑149 (MQ=255)
                                                                 gCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTaa                                                                                  <  6:198954/149‑1 (MQ=255)
                                                                   aGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCGCTACATTTATTTTAGCCGATTCTCCCAAACAAAGGTTTTCGAGAGCATTTTGCACCATGCCGTCGATTTTGATATCGACAAACGGATTCTTGCGGcgtcaaa                                                                                >  1:361931/1‑143 (MQ=255)
                                                                            aaaaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCAc                                                                       >  1:131610/1‑149 (MQ=255)
                                                                             aaaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCAc                                                                       >  1:187696/1‑148 (MQ=255)
                                                                              aaCTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACg                                                                      >  7:271583/1‑148 (MQ=255)
                                                                                cTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAg                                                                   >  6:95576/1‑149 (MQ=255)
                                                                                cTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAg                                                                   >  7:314802/1‑149 (MQ=255)
                                                                                  aCCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc                                                                                         <  7:69379/125‑1 (MQ=255)
                                                                                  aCCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc                                                                                         >  8:69379/1‑125 (MQ=255)
                                                                                    ccATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGcgcg                                                               <  4:367554/149‑1 (MQ=255)
                                                                                      atatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt                                                             <  5:290014/149‑1 (MQ=255)
                                                                                      atatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt                                                             <  8:279413/149‑1 (MQ=255)
                                                                                       tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAg                                                                   <  6:288119/142‑1 (MQ=255)
                                                                                       tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAg                                                                   >  5:288119/1‑142 (MQ=255)
                                                                                       tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTa                                                            <  5:144036/149‑1 (MQ=255)
                                                                                        atCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCAc                                                                       <  8:329482/137‑1 (MQ=255)
                                                                                        atCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCAc                                                                       >  7:329482/1‑137 (MQ=255)
                                                                                         tCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTaa                                                           <  3:72965/148‑1 (MQ=255)
                                                                                         tCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAag                                                          >  1:444532/1‑149 (MQ=255)
                                                                                         tCAGGTATCTGATTCGCCCCTGTCCCTACAGTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAag                                                          >  6:343633/1‑149 (MQ=255)
                                                                                           aGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagc                                                         <  4:413260/148‑1 (MQ=255)
                                                                                               aTCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagcagc                                                      >  2:250176/1‑147 (MQ=255)
                                                                                                   gATTCGCCCCTGTCCCTACATTTCTTTTAGCCGATTCTCCCAAACCAAGGTTTTCGAGAGCCTTATGCACCGTGCGGTCCAATTTGATATCTCCAAACGGATTCTTGCGGCTTAACAGCAGCGCAACAAGCGCGGTAAGCAGATGGTCa                                                >  3:56245/1‑149 (MQ=21)
                                                                                                       cGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATgcc                                            >  2:52213/1‑149 (MQ=255)
                                                                                                       cGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATgc                                             <  2:444532/148‑1 (MQ=255)
                                                                                                          cccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATgccgcc                                         >  3:403705/1‑149 (MQ=255)
                                                                                                          cccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCATCCAATTTGATATCGCCAAAc                                                                                                   >  1:237435/1‑91 (MQ=255)
                                                                                                          cccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCATCCAATTTGATATCGCCAAAc                                                                                                   <  2:237435/91‑1 (MQ=255)
                                                                                                           ccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAagcagc                                                      <  6:244559/135‑1 (MQ=255)
                                                                                                            cTGTCGCTACATTTCTTTTTTCCGTTTCTCCGAAACGTAGTTTTTCGTTTGGGTTTTGCTCCGTGCGGTCGAATTTGATATCGGCAATGGGATTCTTGCGGCTTATCAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGcccc                                       <  2:426320/149‑1 (MQ=255)
                                                                                                               tCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATCTCGCCAAACGGATTCTTCCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTtc                                    <  7:224616/149‑1 (MQ=255)
                                                                                                               tCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATc                                                                                                          <  7:83349/79‑1 (MQ=255)
                                                                                                               tCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATc                                                                                                          >  8:83349/1‑79 (MQ=255)
                                                                                                                 ccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTtctc                                  >  2:190711/1‑149 (MQ=255)
                                                                                                                 ccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTtctc                                  <  7:121744/149‑1 (MQ=255)
                                                                                                                 ccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGAAGCTGGTCATGCCGCCCCTtctc                                  >  5:241107/1‑149 (MQ=255)
                                                                                                                    aCATTTCTTATAGCCGCTGCTCCCAAACCACGGTTTTCGAGCGCCGTTGGCACCGGGCCGGCCAATTTGATATCGCCAAACGGAGTCGTCCGGCATAACAGCACCTCACGAAGCGCGGTAAGCAGCGGGTCCTGCCGACCCTGCTcccg                               >  6:270934/1‑147 (MQ=17)
                                                                                                                      aTTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCtttt                                                                                                                                   <  6:339009/47‑1 (MQ=255)
                                                                                                                        ttCTTTTAGCCGCTTCTCCCAACCCAAGCTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCCCCAAACGGAATCTTGCGGCTTACCAGCAGCGCACGAAGCGCGGTAAGACGCAGGTCATGCCGCCACTTCTCCCGGCTg                           >  5:189963/1‑149 (MQ=255)
                                                                                                                           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt                                                             >  3:182208/1‑112 (MQ=255)
                                                                                                                           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGt                                                             <  4:182208/112‑1 (MQ=255)
                                                                                                                           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCa                        >  7:229604/1‑149 (MQ=255)
                                                                                                                           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCa                        >  7:331480/1‑149 (MQ=255)
                                                                                                                             ttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGc                         <  8:314802/146‑1 (MQ=255)
                                                                                                                             ttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCa                        <  5:95576/147‑1 (MQ=255)
                                                                                                                                gCCGCTTCTCCCCACCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGTTATCGCCCAAGGGATTCTTGCGGCTTACCAGCCGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCGTCTCCAGGCGGGCCCCg                     >  2:173350/1‑147 (MQ=255)
                                                                                                                                gCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgc                                                                  >  6:354723/1‑102 (MQ=255)
                                                                                                                                gCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAgc                                                                  <  5:354723/102‑1 (MQ=255)
                                                                                                                                gCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCg                     >  3:413683/1‑147 (MQ=255)
                                                                                                                                 ccGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAg                  <  5:37435/149‑1 (MQ=255)
                                                                                                                                         cccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCca           <  5:227374/148‑1 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTaa                                                                                  <  7:450994/76‑1 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTaa                                                                                  >  8:450994/1‑76 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAg                  <  1:92333/140‑1 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAg                  >  2:92333/1‑140 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTcc            <  2:131610/146‑1 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCcac          >  5:144533/1‑148 (MQ=255)
                                                                                                                                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCcac          >  1:392990/1‑148 (MQ=255)
                                                                                                                                            aaaCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAAc       >  2:337982/1‑149 (MQ=255)
                                                                                                                                              aCCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTaa                                                           <  8:361089/95‑1 (MQ=255)
                                                                                                                                               ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAg                               <  6:111489/122‑1 (MQ=255)
                                                                                                                                               ccAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCt    <  6:89645/149‑1 (MQ=255)
                                                                                                                                                cAATGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATAGGCAAACGGTTTCGTGCGGGTTAACAGCAGCGCACGAAGCCCGGTAATGAGCTGGTCATGCCGCCCCTTCTGCCGGGGGGCACCGGAGGCCTCCACAACGCTg   <  4:352368/149‑1 (MQ=255)
                                                                                                                                                cAAGGTTTTCGAGAGCCTTTTGCCCCGTGCCGTCCAAGTTGATATCGCCCAACGGATTCTTGCGGGTTAACAGCAGCGCACGCAGCGCGGTAAGCCGCTGGGCATGCCGCCCCTGCTCCAGGCTGGCACCGGAGGCCTCCCCACCGCTg   >  2:310537/1‑149 (MQ=255)
                                                                                                                                                cAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTg   >  3:128468/1‑149 (MQ=255)
                                                                                                                                                 aaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCAt                                               <  1:301645/104‑1 (MQ=255)
                                                                                                                                                 aaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCAt                                               >  2:301645/1‑104 (MQ=255)
                                                                                                                                                 aaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTg   >  5:313107/1‑148 (MQ=255)
                                                                                                                                                 aaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTg   >  6:11802/1‑148 (MQ=255)
                                                                                                                                                  aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGc  >  2:105237/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GAACATCAATTGGCCCCCATTGAATAATTAAACCGGATGGCAATTTTTGATATCCAGGAACTGAAGCAGAAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGC  >  NC_000913/2471750‑2472043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.