New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 291401	NA (NA)	11 (0.120)	9/266	NT	84.6%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 1806304	2 (0.020)					intergenic (‑221/‑66)	ydiY/pfkB	acid‑inducible putative outer membrane protein/6‑phosphofructokinase II

ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291330‑291401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAAGAATACATTGCTAAGTTATTCGCGCCTTTTTATAAT  <  NC_000913/1806304‑1806176                                                                                                                                                                                                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTA                                                       <  8:352998/148‑1      AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAA                                                  >  5:151616/1‑148        CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAA                                                >  5:374849/1‑148              CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAA                                         <  4:97781/149‑1                 aTGGAGCACCTCAAAAACACAATCATACACTAAATCACTAAGTTGGCAGCATCACAATGATTTATTGTAGCTATATTTAAAATTTTGCATATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAA                                      <  1:222344/148‑1                          CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAATAATACATT                             >  1:187146/1‑149                          CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAAGAATACATT                             >  2:83630/1‑149                          CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAAT                                        <  3:270555/138‑1                          CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAAT                                        >  4:270555/1‑138                             AAAAACACCATCATACTCTAAATCAGAAAGTTGGCAGCATCCACATGATTTATTGGAGATTTATTTAAAATTTTGCAGATAAATATAATTAAAAAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATACGAATACATTGC                           >  2:122370/1‑148                                                       TAAGTTGGCAGCATCACCATGATTTATGGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAAGAATACATTGCTAAGTTATTCGCGCCTTTTTATAAT  >  7:194941/1‑147                                                                                                                                                                                                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291330‑291401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGATTTATTGGAGCTTTATTTAAAATTTTGCAGATAAATATATATAAATAAAAATCTGTTTTCGCCACATGCTTATTCAAAAAATGAAATAAGAATACATTGCTAAGTTATTCGCGCCTTTTTATAAT  <  NC_000913/1806304‑1806176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.