New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4621634 =121 (1.370)5 (0.060) 5/246 NT 4.5% intergenic (+32/‑135) deoD/yjjJ purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase/putative protein kinase
?NC_000913 4621662 = 102 (1.250)intergenic (+60/‑107) deoD/yjjJ purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase/putative protein kinase
Rejected: Frequency below/above cutoff threshold.

AAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4621790‑4621634
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccggcttTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGC  >  NC_000913/4621662‑4621805
                                                                                                                                                                                                                                                                                                             
AAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGC                                                                                                                                                          >  8:174158/1‑149
AAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGC                                                                                                                                                          >  7:75971/1‑149
 AAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCT                                                                                                                                                         <  2:247190/149‑1
 AAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCT                                                                                                                                                         >  2:95499/1‑149
  AGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTC                                                                                                                                                        >  2:174832/1‑149
  AGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTC                                                                                                                                                        <  8:101120/149‑1
   GATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCC                                                                                                                                                       >  8:237469/1‑149
   GATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCC                                                                                                                                                       >  4:330103/1‑149
   GATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCC                                                                                                                                                       >  5:137081/1‑149
    ATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCG                                                                                                                                                      >  3:172621/1‑149
                                                                           TGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTT                                                                                >  6:90886/1‑148
                                                                                         AAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAA                                                                 <  5:90886/149‑1
                                                                                                                             TAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGC                             >  1:111701/1‑149
                                                                                                                                AAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTA                                                                                                     <  6:100657/74‑1
                                                                                                                                AAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTA                                                                                                     >  5:100657/1‑74
                                                                                                                                                    CTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGG       <  3:80242/148‑1
                                                                                                                                                    CTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAG        <  4:273027/147‑1
                                                                                                                                                     TCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGC     >  3:229425/1‑149
                                                                                                                                                     TCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGC     >  7:131743/1‑149
                                                                                                                                                     TCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGA                          >  1:311225/1‑128
                                                                                                                                                     TCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGA                          <  2:311225/128‑1
                                                                                                                                                       CGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCG   >  3:88848/1‑149
                                                                                                                                                       CGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCG   >  1:405542/1‑149
                                                                                                                                                       CGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCG   >  8:89687/1‑149
                                                                                                                                                        GGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGC  <  2:168309/149‑1
                                                                                                                                                                                                                                                                                                             
AAAGATCAGTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4621790‑4621634
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccggcttTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGC  >  NC_000913/4621662‑4621805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.