| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,678,713 | C→T | 5.9% | D159N (GAT→AAT) | yhjH ← | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,678,713 | 0 | C | T | 5.9% | 216.5 / 2.4 | 69 | D159N (GAT→AAT) | yhjH | cyclic‑di‑GMP phosphodiesterase, FlhDC‑regulated |
| Reads supporting (aligned to +/- strand): ref base C (31/33); new base T (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
AGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGGCGAT > NC_000913/3678566‑3678854 | aGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAatca > 7:138054/1‑149 (MQ=255) cGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAatcatc < 1:125645/149‑1 (MQ=255) aTTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCa < 4:203331/149‑1 (MQ=255) aTTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCa < 1:212887/149‑1 (MQ=255) aTTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCca > 3:92912/1‑149 (MQ=255) aTTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCca > 5:196173/1‑149 (MQ=255) tGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCgg < 7:186043/149‑1 (MQ=255) tAAAAGCTGATAAAAGCGTGTGCGGCCTTCCGGCGACTGACGCAGCATCACAAACCGTTCTCGCGCGATTTTGATGTAGTCATACCGCACTTCACTTACCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGc < 2:116088/149‑1 (MQ=255) tAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGc > 5:382502/1‑149 (MQ=255) atcgtagaAAAGCGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACATTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCaaa < 8:275396/144‑1 (MQ=255) aGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCaaa < 2:97540/149‑1 (MQ=255) cTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTTTATCAGCATCACAAACAGTTCTAGCGCGATTTTGATGTAGTCATATCTCTCTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTAACAAAATGATCCAGCCACAGCGGGCCAAAtt < 6:271961/149‑1 (MQ=255) gagaAAAGAGTGTGCGTCCTTCCGGCGACTGCCGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTca > 6:82546/1‑149 (MQ=255) agaAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGTTGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTcac < 4:317716/149‑1 (MQ=255) agaAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTca < 6:222902/148‑1 (MQ=255) gaAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTcaca > 2:351348/1‑149 (MQ=255) aaaaGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTcaca > 1:167193/1‑148 (MQ=255) agTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGa < 6:10132/149‑1 (MQ=255) tgCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCg > 6:129173/1‑144 (MQ=255) tgCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCg < 5:129173/144‑1 (MQ=255) cGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCaaa < 7:173000/149‑1 (MQ=255) cGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCa > 8:9370/1‑147 (MQ=255) cTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGtt < 7:112305/149‑1 (MQ=255) cTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGtt < 2:167193/149‑1 (MQ=255) gCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCg < 8:89067/132‑1 (MQ=255) gCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCg > 7:89067/1‑132 (MQ=255) gACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAatca < 6:334019/99‑1 (MQ=255) gACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAatca > 5:334019/1‑99 (MQ=255) aCTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTc < 7:294848/149‑1 (MQ=255) cTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCg < 3:374756/149‑1 (MQ=255) cTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCg < 6:307770/149‑1 (MQ=255) cTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCg < 5:315657/149‑1 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTca < 7:216703/120‑1 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTca > 8:216703/1‑120 (MQ=255) tGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGATTCTTTCgg > 2:84586/1‑149 (MQ=255) aCGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGc < 5:38449/148‑1 (MQ=255) cagcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGAc < 6:382502/149‑1 (MQ=255) ggcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTc > 4:176292/2‑141 (MQ=255) ggcaTCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTc < 3:176292/140‑1 (MQ=255) caAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAAtt < 2:253833/105‑1 (MQ=255) caAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGAACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAAtt > 1:253833/1‑105 (MQ=255) aaaaAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCAATTAGCGCAGAGAAATTTTCCATCCCGGTACAAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGAAAAGTTTGAATCTTTCGGCATACGGATATGCt < 7:347247/149‑1 (MQ=255) aaaCAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCt > 7:164012/1‑149 (MQ=255) aaaCAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCt > 8:323600/1‑149 (MQ=255) cAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTcca < 2:193914/149‑1 (MQ=255) aGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATTATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTccac > 8:14608/1‑149 (MQ=255) aGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATTATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTccac > 8:20444/1‑149 (MQ=255) tcGCGCGATTTTGATGTAGTCATAACGCCCTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGtt > 2:97071/1‑149 (MQ=255) cgcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTc > 3:326444/1‑149 (MQ=255) gcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGtt < 7:323600/147‑1 (MQ=255) gcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTc > 6:376014/1‑148 (MQ=255) gcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTc > 8:337618/1‑148 (MQ=255) gcgcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCg < 1:351348/149‑1 (MQ=255) gcgATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGaa < 5:376014/149‑1 (MQ=255) cgATTTTGATGTAGTCAAAACGCACTGCCCTTACCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGaaa < 6:183124/149‑1 (MQ=255) gTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGa < 5:82546/148‑1 (MQ=255) aTAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGa < 6:196173/148‑1 (MQ=255) aTAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGAc > 8:268899/1‑149 (MQ=255) aTAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGAc > 4:139580/1‑149 (MQ=255) cttcacttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATc > 5:213089/1‑149 (MQ=255) tcacttAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTg > 3:373031/1‑149 (MQ=255) aGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCa < 7:9370/148‑1 (MQ=255) agaAATTTGCCATCCCGGTACCAAAATTATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAttttt < 7:20444/149‑1 (MQ=255) gaAATTTGCCATCCCGGTACCAAAATTATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGAttttt < 7:14608/148‑1 (MQ=255) aTTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGtt > 7:257379/1‑149 (MQ=255) cATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGAc > 3:269130/1‑149 (MQ=255) aTCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGgcg < 4:376686/128‑1 (MQ=255) aTCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGgcg > 3:376686/1‑128 (MQ=255) tCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACg > 5:223578/1‑148 (MQ=255) ggTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAggg > 7:393132/1‑149 (MQ=255) cAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGAAGGATTTTTGGTTGCTGACGCAGGGCGAt > 2:3539/1‑148 (MQ=255) aaaaTCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGCCGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGGCGAt > 5:286007/1‑147 (MQ=255) aaaaTCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGGCGAt > 8:17167/1‑147 (MQ=255) | AGCGATTCATTAGATGTAAAAGCTGAGAAAAGAGTGTGCGTCCTTCCGGCGACTGACGCAGCATCACAAACAGTTCTCGCGCGATTTTGATGTAGTCATAACGCACTTCACTTAGCGCAGAGAAATTTGCCATCCCGGTACCAAAATCATCCAGCCACAGCGGGCCAAATTCACACATCGAGGCAAAGGTTGAATCTTTCGGCAGACGGATATGCTCCACCAGTTCGAAACGCAGCCAGGGAAGACGCTCAATCTGGCGCAGGATTTTTGGTTGCTGACGCAGGGCGAT > NC_000913/3678566‑3678854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |