New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 193444 =78 (0.820)4 (0.050) 4/242 NT 5.2% intergenic (+15/‑77) frr/dxr ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
?NC_000913 193489 = 73 (0.840)intergenic (+60/‑32) frr/dxr ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase

TGAAAGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAA  >  NC_000913/193299‑193591
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tttttgcctggcaccagcgcaactacgcggaagtgtgcggtcttatggcgcagcacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagtgttgagacagaataaaaagcaaaa                                                                                                                                                   >  5:208194‑M1/146‑149 (MQ=255)
tttttgcctgccaccagcgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   <  1:170987‑M1/4‑1 (MQ=255)
tttttgcctgccaccagcgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   <  1:31048‑M1/4‑1 (MQ=255)
  aaaGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAAc                                                                                                                                                  <  1:204043/148‑1 (MQ=255)
    aGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAAcgcc                                                                                                                                               >  7:344503/1‑149 (MQ=255)
      aTAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAAcgccgc                                                                                                                                             >  4:365268/1‑149 (MQ=255)
       tAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCt                                                                                                                                            >  5:332630/1‑149 (MQ=255)
       ctgccaccagcgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagcataaaaagcAAAAcgccgc                                                                                                                                             <  1:279149‑M1/10‑1 (MQ=255)
       ctgccaccagcgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAACGCCGCt                                                                                                                                            <  3:235172‑M1/11‑1 (MQ=255)
               tCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAg                                                                                                                                         >  7:234677/1‑144 (MQ=255)
               acAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAAcgccg                                                                                                                                              >  8:407148/2‑139 (MQ=255)
               acAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAAcgccg                                                                                                                                              <  7:407148/138‑1 (MQ=255)
                 cgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   >  1:198273‑M1/129‑132 (MQ=255)
                 cgcaactacgcggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   <  2:198273‑M1/4‑1 (MQ=255)
                 aGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATcc                                                                                                                                  <  2:155464/149‑1 (MQ=255)
                     aaGACGACGATCGCCGTTCTCAGGACGGTGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGc                                                                                                                              <  7:432422/149‑1 (MQ=255)
                          gacgaTCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATc                                                                                                                         >  8:370323/1‑149 (MQ=255)
                            ggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   >  6:295009‑M1/118‑121 (MQ=255)
                            ggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcaaaa                                                                                                                                                   <  5:295009‑M1/4‑1 (MQ=255)
                            ggaagtgttcgggattatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAACGCCGCTCAGTAGATCCTTGCGGATCgg                                                                                                                       <  2:152259‑M1/32‑1 (MQ=255)
                            cgaTCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCgg                                                                                                                       <  2:82137/149‑1 (MQ=255)
                             gaTCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGc                                                                                                                      >  7:36561/1‑149 (MQ=255)
                               tCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTg                                                                                                                    <  6:357721/149‑1 (MQ=255)
                                  ccGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTg‑gcg                                                                                                                <  5:332858/149‑1 (MQ=255)
                                     ttCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑gcggcg                                                                                                             >  7:387952/1‑149 (MQ=255)
                                         cAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGtttt                                                                                                         >  6:9849/1‑149 (MQ=255)
                                         attatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGtttt                                                                                                         >  4:235172‑M1/105‑149 (MQ=255)
                                          ttatggcgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTg                                                                                                        >  1:152259‑M1/104‑149 (MQ=255)
                                          aGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGC‑CAGCCGATCCGCAAGGATCTACTGAGCGGCGttttt                                                                                                        <  1:122139/149‑2 (MQ=25)
                                              cGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCttt                                                                                                    <  3:2516/149‑1 (MQ=255)
                                               gcgccccacggccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAACGCCGCGCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCttt                                                                                                    >  6:228557‑M1/99‑148 (MQ=255)
                                                cgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAAcgc                                                                                                                                                <  3:123616‑M1/7‑1 (MQ=255)
                                                cgcaccacgtccagcgtgctgcaaccaatcgagccggtcgagcccagaatggtgagttgcttcatgaaacatccagagttgagacagaataaaaagcAAAAcgc                                                                                                                                                >  4:123616‑M1/98‑104 (MQ=255)
                                                     cAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCt                                                                                             <  6:306267/149‑1 (MQ=255)
                                                      aGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTg                                                                                            >  5:194256/1‑149 (MQ=255)
                                                       gAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGt                                                                                           <  5:248301/149‑1 (MQ=255)
                                                        aaaCTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGtc                                                                                          >  2:15858/1‑149 (MQ=255)
                                                        aaaCTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGtc                                                                                          <  3:365268/149‑1 (MQ=255)
                                                              actgaTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAAct                                                                                    >  2:162901/1‑149 (MQ=255)
                                                                  aTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTgg                                                                                <  6:332630/149‑1 (MQ=255)
                                                                     ctgcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGAt                                                                              <  1:351011/148‑1 (MQ=255)
                                                                      tgcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGt                                                                            >  7:307771/1‑149 (MQ=255)
                                                                       gcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGtt                                                                           >  5:47912/1‑149 (MQ=255)
                                                                       gcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGtt                                                                           >  2:329703/1‑149 (MQ=255)
                                                                       gcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCCGATTTCTTGGACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGtt                                                                           >  1:75937/1‑149 (MQ=255)
                                                                        cAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAATAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGttt                                                                          >  1:191626/1‑149 (MQ=255)
                                                                        cAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGttt                                                                          <  8:234677/149‑1 (MQ=255)
                                                                         aaTCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGGAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTc                                                                         <  8:344503/149‑1 (MQ=255)
                                                                         aaTCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCTGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTc                                                                         <  7:370323/149‑1 (MQ=255)
                                                                          aTCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGTCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCa                                                                        >  4:319207/1‑149 (MQ=255)
                                                                          aTCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCa                                                                        <  4:332847/149‑1 (MQ=255)
                                                                           tCAAGAAAATTGAATCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCAt                                                                       >  6:21752/1‑149 (MQ=255)
                                                                           tCAAGAAAATTGAAGCTGCGCTGCCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGtt                                                                           <  1:120112/145‑1 (MQ=255)
                                                                           tCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCAt                                                                       >  1:55205/1‑149 (MQ=255)
                                                                           tCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCATTGCGGATCGGATG‑GCGGCGTTTTGCTTTTTATTATGTCTCAACTATGGATGtt                                                                           >  2:120112/1‑145 (MQ=255)
                                                                             aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATg                                                                      >  2:219325/1‑148 (MQ=255)
                                                                             aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGa                                                                     <  5:9849/149‑1 (MQ=255)
                                                                             aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTAGTCTGTCTCAACTCTGGATGTTTCATg                                                                      >  7:86337/1‑148 (MQ=255)
                                                                             aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATATCTTGAAAGACAAAAACGCCGCTCAGTAGATCCTTTAGGATCTGCTG‑GCGGCGTTTTGCTTTTTATTCTGTATCAACTATGGATGTTTCAtt                                                                      >  6:168864/1‑147 (MQ=255)
                                                                              aGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGtc                                                                                          >  6:334306/1‑127 (MQ=255)
                                                                              aGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGtc                                                                                          <  5:334306/127‑1 (MQ=255)
                                                                              aGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATg                                                                      >  7:138292/1‑147 (MQ=255)
                                                                              aGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGAGGATCGGCTG‑TCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATg                                                                      >  1:380299/1‑147 (MQ=255)
                                                                                aaaaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAg                                                                   >  5:234320/1‑148 (MQ=255)
                                                                                    ttGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACt                                                              <  1:219325/149‑1 (MQ=255)
                                                                                     tGAAGCGGCGCTGGCAGACAAAGAAGCAGAACAGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACt                                                              >  2:5442/1‑148 (MQ=255)
                                                                                         gcggcgCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCa                                                         >  1:181947/1‑149 (MQ=255)
                                                                                                  gCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGc                                                 <  8:163586/148‑1 (MQ=255)
                                                                                                      aCAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGAc                                            >  3:232900/1‑149 (MQ=255)
                                                                                                      aCAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGAc                                            >  6:219943/1‑149 (MQ=255)
                                                                                                      aCAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGAc                                            <  3:200839/149‑1 (MQ=255)
                                                                                                          agaagCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGc                                                 >  3:88038/1‑140 (MQ=255)
                                                                                                          agaagCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGc                                                 <  4:88038/140‑1 (MQ=255)
                                                                                                          agaagCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGc                                        >  4:253153/1‑149 (MQ=255)
                                                                                                          agaagCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGc                                        >  2:187457/1‑149 (MQ=255)
                                                                                                                 gAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTg                                 >  4:154963/1‑149 (MQ=255)
                                                                                                                     tGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCCTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCTACTCTGGATGTTTCATGAAGCCACTCGACATTCTGGGCTCGCCCGGCTGGATTGGTTg                             >  5:199861/1‑149 (MQ=255)
                                                                                                                       aTGCAGTTCTGATTTCTTGAACGACAATAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTg                             <  2:191626/147‑1 (MQ=255)
                                                                                                                       aTGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAAGTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgc                            <  8:288659/148‑1 (MQ=255)
                                                                                                                       aTGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgca                           <  2:181947/149‑1 (MQ=255)
                                                                                                                       aTGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgca                           <  6:47912/149‑1 (MQ=255)
                                                                                                                       aTGCAGTTCCGATTTCTTGGACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgc                            <  2:75937/148‑1 (MQ=255)
                                                                                                                          cAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgcagc                         <  4:232900/148‑1 (MQ=255)
                                                                                                                             ttCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGc                     >  2:170987/1‑149 (MQ=255)
                                                                                                                             ttCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGc                     >  2:31048/1‑149 (MQ=255)
                                                                                                                             ttCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGc                     <  2:55205/149‑1 (MQ=255)
                                                                                                                                tGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTg                             >  7:266654/1‑138 (MQ=255)
                                                                                                                                tGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTg                             <  8:266654/138‑1 (MQ=255)
                                                                                                                                  aTTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTgg                  <  5:219943/147‑1 (MQ=255)
                                                                                                                                  aTTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGAc                <  8:307771/149‑1 (MQ=255)
                                                                                                                                   tttCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACg               >  5:419930/1‑149 (MQ=255)
                                                                                                                                    ttCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCCCCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgt              >  1:284180/1‑149 (MQ=255)
                                                                                                                                       ttGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTT‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgtggt           <  5:168864/149‑1 (MQ=255)
                                                                                                                                         gAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgtgg            <  3:378673/146‑1 (MQ=255)
                                                                                                                                             gACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGCCTG‑GCGGCGTTTTGATTTTTATACTGTCAAACCTCAGGATGTTTCATCAATCAACTCACAATTCTCGGCACGACCGCCTCCATAGGATGAACCACGCGGGACGTGGTGCGCCa     >  6:229791/1‑149 (MQ=255)
                                                                                                                                                aaaaaCGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATaa  >  2:279149/1‑149 (MQ=255)
                                                                                                                                                aaaaaCGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATaa  <  1:162901/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
TGAAAGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTG‑GCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAA  >  NC_000913/193299‑193591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.