New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3995187 =114 (1.200)3 (0.030) 3/250 NT 2.8% coding (426/825 nt) dapF diaminopimelate epimerase
?NC_000913 3995216 = 101 (1.120)coding (455/825 nt) dapF diaminopimelate epimerase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 131 total aligned reads displayed.

GTGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC  >  NC_000913/3995039‑3995334
                                                                                                                                                    |                                                                                                                                                   
gTGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATgcgc                                                                                                                                                     <  5:302598/149‑1 (MQ=255)
 tGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGCCCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATgcgcg                                                                                                                                                    >  4:82566/1‑149 (MQ=255)
  ctcgcgcttaaccacttgcataaaaccgatattggcgcgctccggaaaacgctcgtggctttccagaacaggaccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccacgc                                                                                                                                                   <  8:223338‑M1/3‑1 (MQ=255)
   atatCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATgcgcgc                                                                                                                                                   <  8:136798/148‑1 (MQ=255)
    tatCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGCCCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCGAACAAAGCGTTAAAGACCTATAGTATgcgcgac                                                                                                                                                  >  4:331372/1‑146 (MQ=255)
    tatCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGcgccg                                                                                                                                                 >  8:104402/1‑149 (MQ=255)
     gcgcttaaccacttgcataaaaccgatattggcgcgctccggaaaacgctcgtggctttccagaacaggaccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccacgccgc                                                                                                                                                >  5:416983‑M1/144‑149 (MQ=255)
         gcgTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGTACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAg                                                                                                                                            <  8:222845/149‑1 (MQ=255)
         gcgTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAg                                                                                                                                            <  6:301570/149‑1 (MQ=255)
         gcgTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAg                                                                                                                                            >  5:301570/1‑149 (MQ=255)
               gCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGAc                                                                                                                                       >  8:261215/1‑148 (MQ=255)
               gCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGAc                                                                                                                                       >  5:27452/1‑148 (MQ=255)
               gCACCGCCAACGGGCGGATGGTTCTGACAGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGAc                                                                                                                                       >  5:183693/1‑148 (MQ=255)
                  ccGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATc                                                                                                                                   <  3:14952/149‑1 (MQ=255)
                      cAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTAt                                                                                                                               <  7:104402/149‑1 (MQ=255)
                      cAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTAt                                                                                                                               <  6:362663/149‑1 (MQ=255)
                        aCGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACATTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTAt                                                                                                                               >  7:428853/1‑147 (MQ=255)
                            gCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATgcggcg                                                                                                                         <  3:373809/149‑1 (MQ=255)
                             cGGATGGTTCTGCCCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCgt                                                                                                                        <  1:124378/149‑1 (MQ=255)
                              ggATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCgtg                                                                                                                       >  1:53903/1‑149 (MQ=255)
                               gATGGTTCTGACCGTCCCCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCgtgg                                                                                                                      >  2:112705/1‑149 (MQ=255)
                                     tCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCTTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGa                                                                                                                                             <  3:344637/120‑1 (MQ=255)
                                     tCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGa                                                                                                                                             >  4:344637/1‑120 (MQ=255)
                                      cTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGa                                                                                                                <  6:74079/148‑1 (MQ=255)
                                       tGACCTTCACCGCTGATGATCTGGTCCGCGTAAATATGGTCGAACCCTACTTCGAACCTTCCGCCGTGCAGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATgcggc                                                                                                                          <  6:5730/137‑1 (MQ=255)
                                       tGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAATACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATgcggc                                                                                                                          >  5:5730/1‑137 (MQ=255)
                                       tGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATg                                                                                                              >  6:296934/1‑149 (MQ=255)
                                        gctccggaaaacgctcgtggctttccagaacaggaccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccaCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTc                                                                                                                  <  8:192305‑M1/36‑1 (MQ=255)
                                         ctccggaaaacgctcgtggctttccagaacaggaccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccaCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATggg                                                                                                            >  6:172512‑M1/108‑149 (MQ=255)
                                           cGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGa                                                                                                           >  5:105496/1‑148 (MQ=255)
                                           cGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGa                                                                                                           >  5:391421/1‑148 (MQ=255)
                                                 cGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCg                                                                                                     >  3:315285/1‑148 (MQ=255)
                                                      atgatCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGc                                                                                               <  1:112705/149‑1 (MQ=255)
                                                        gatCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCACCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGt                                                                                             >  1:283138/1‑149 (MQ=255)
                                                        gatCTGGACCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCACCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGt                                                                                             >  5:415467/1‑149 (MQ=255)
                                                              gTCCGCGTAAATTTGGGCGAACCCAACTTCGAACGTTCCGCGGTGCCGTTTCGCGCTTTCAAAGCGTAAAAGACCTATATTATGCGCGGCGCCGAGGAGACAATCTTATGCGGCGTGGTGTCGATGGGAATTCCGCATTGCGTGATTc                                                                                        <  8:211931/148‑1 (MQ=255)
                                                              gTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCTCATTGCGTGATTc                                                                                        <  6:391421/148‑1 (MQ=255)
                                                              gTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGa                                                                                           <  6:183693/145‑1 (MQ=255)
                                                              gTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGAtt                                                                                         <  7:261215/147‑1 (MQ=255)
                                                                 cgcgTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGaaa                                                                                                         >  4:153594/1‑128 (MQ=255)
                                                                 cgcgTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGGGTCGATGGGAAATCCGCATTGCGTGATTCAGGt                                                                                    <  6:128873/149‑1 (MQ=255)
                                                                    gTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCga                                                                                 >  6:345761/1‑149 (MQ=255)
                                                                    gTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGAGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCTGCGTGGTGTCGATgg                                                                                                             >  7:225555/1‑121 (MQ=255)
                                                                     tAAATATGGGCGAACCCAACTTCGAACCTTCCGCAGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgat                                                                                <  8:428853/149‑1 (MQ=255)
                                                                       aaTATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatg                                                                               <  1:17048/148‑1 (MQ=255)
                                                                       aaTATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatg                                                                               <  4:91900/148‑1 (MQ=255)
                                                                       aaTATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatg                                                                               <  6:399215/148‑1 (MQ=255)
                                                                       aaTATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCACCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatga                                                                              <  2:283138/149‑1 (MQ=255)
                                                                       aaTATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCACCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatga                                                                              <  6:415467/149‑1 (MQ=255)
                                                                       aaTATCGGCGAACCCAACTTCGAACCTTCCCCCGTGCCGGTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCgatga                                                                              <  6:118726/149‑1 (MQ=255)
                                                                           ccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccacgccgc                                                                                                                                                >  8:35934‑M1/74‑79 (MQ=255)
                                                                           ccaagcgtttctaccgccgcggtatcgacatcatcgacctgaatcacgcaatgcggatttcccatcgacaccacgccgc                                                                                                                                                <  7:35934‑M1/6‑1 (MQ=255)
                                                                             ggCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGt                                                                                    >  8:19188/1‑137 (MQ=255)
                                                                             ggCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGt                                                                                    <  7:19188/137‑1 (MQ=255)
                                                                                gAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATAc                                                                     >  7:325577/1‑149 (MQ=255)
                                                                                 aaCCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCa                                                                                       >  7:218394/1‑130 (MQ=255)
                                                                                 aaCCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCa                                                                                       <  8:218394/130‑1 (MQ=255)
                                                                                 aaCCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATAcc                                                                    >  7:172020/1‑149 (MQ=255)
                                                                                    ccAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACcgcg                                                                 >  2:145095/1‑149 (MQ=255)
                                                                                    ccAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACcgcg                                                                 >  4:375797/1‑149 (MQ=255)
                                                                                      aaCTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGatgatg                                                                            <  6:61448/136‑1 (MQ=255)
                                                                                       aCTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATgcg                                                                                                                            >  6:158437/1‑87 (MQ=255)
                                                                                       aCTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATgcg                                                                                                                            <  5:158437/87‑1 (MQ=255)
                                                                                       aCTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCgcggcg                                                              <  7:408789/149‑1 (MQ=255)
                                                                                         ttCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGcggcgg                                                             >  1:215783/1‑148 (MQ=255)
                                                                                         ttCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCATGATTCAGGTCGATGATGTCGATACCGcggcgg                                                             >  7:205889/1‑148 (MQ=255)
                                                                                           cGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTa                                                           <  6:27452/148‑1 (MQ=255)
                                                                                             aaCCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCg                                                                                  <  1:441655/123‑1 (MQ=255)
                                                                                             aaCCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCg                                                                                  >  2:441655/1‑123 (MQ=255)
                                                                                               ccTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAAc                                                      >  5:346344/1‑149 (MQ=255)
                                                                                               ccTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAAc                                                      >  3:245998/1‑149 (MQ=255)
                                                                                                 ttCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGc                                                    >  4:117647/1‑149 (MQ=255)
                                                                                                    cgccgTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTg                                                 >  4:129961/1‑149 (MQ=255)
                                                                                                            cgtTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGtt                                         <  8:172020/149‑1 (MQ=255)
                                                                                                              tttCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGAc                                                                                                                                       >  2:434836/1‑53 (MQ=255)
                                                                                                              tttCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGAc                                                                                                                                       <  1:434836/53‑1 (MQ=255)
                                                                                                                    gcTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAg                                 <  8:325577/149‑1 (MQ=255)
                                                                                                                     cTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGc                                <  1:167390/149‑1 (MQ=255)
                                                                                                                       aaCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGACGATACCGCGGCGGTAGAAACGCt                                                   >  8:413585/1‑128 (MQ=255)
                                                                                                                        aCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGt                                                                                             <  5:364572/85‑1 (MQ=255)
                                                                                                                        aCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCa                              <  1:194313/148‑1 (MQ=255)
                                                                                                                        aCAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCAc                             >  2:118404/1‑149 (MQ=255)
                                                                                                                         cAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGt                                                                                    >  7:351528/1‑93 (MQ=255)
                                                                                                                         cAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGt                                                                                    <  8:351528/93‑1 (MQ=255)
                                                                                                                         cAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCAc                             >  8:381724/1‑148 (MQ=255)
                                                                                                                          aaaGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCAc                             >  7:287356/1‑147 (MQ=255)
                                                                                                                           aaGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAg                          >  3:207922/1‑149 (MQ=255)
                                                                                                                                   aaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                  <  4:207922/149‑1 (MQ=255)
                                                                                                                                    aGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                 <  3:129961/149‑1 (MQ=255)
                                                                                                                                      aCCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATa                                                                      >  8:328857/1‑94 (MQ=255)
                                                                                                                                      aCCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                 >  6:214450/1‑147 (MQ=255)
                                                                                                                                      aCCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGa               <  3:375797/149‑1 (MQ=255)
                                                                                                                                          atatTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCt                                                   <  5:30767/109‑1 (MQ=255)
                                                                                                                                          atatTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCt                                                   >  6:30767/1‑109 (MQ=255)
                                                                                                                                           tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc           <  3:117647/148‑1 (MQ=255)
                                                                                                                                            attatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCATGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGGTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcgc         >  8:5635/1‑149 (MQ=255)
                                                                                                                                                tGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa      >  2:31579/1‑148 (MQ=255)
                                                                                                                                                  cgcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                   <  5:358011/133‑1 (MQ=255)
                                                                                                                                                  cgcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                   >  6:358011/1‑133 (MQ=255)
                                                                                                                                                   gcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc  >  7:223338/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GTGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC  >  NC_000913/3995039‑3995334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.