| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,042,085 | IS2 (+) +5 bp | coding (2122‑2126/2181 nt) | etk ← | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 381260 = | NA (NA) | 91 (0.910) | 73/280 | 0.3 | 90.7% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1042089 | 9 (0.090) | coding (2122/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation | |||||
| * | ? | NC_000913 | 1042085 = | 9 (0.090) | 63 (0.630) | 49/280 | 1.5 | 87.1% | coding (2126/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| ? | NC_000913 | = 1651548 | NA (NA) | noncoding (706/706 nt) | IS2 | repeat region | |||||
Only 100 of 165 total aligned reads displayed.
TTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAACGCCCCAC > NC_000913/1041937‑1042233 | caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 8:373687‑M1/1‑1 (MQ=255)caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 2:358240‑M1/149‑149 (MQ=255)caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 8:108631‑M1/1‑1 (MQ=255) aaagaaccttgaagaggcgttcgagcattataacgaatggaatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGt < 6:303540‑M1/2‑1 (MQ=255) aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTg < 4:248517‑M1/3‑1 (MQ=255) ccTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGc < 3:242605/149‑1 (MQ=255) cTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCt > 8:177741/1‑149 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcttccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGgcg < 6:281650‑M1/9‑1 (MQ=255) tGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagac < 8:356081‑M2/149‑6 (MQ=255) tGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGgcgc < 3:313861/149‑1 (MQ=255) ctctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactg < 5:142929‑M2/149‑8 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGttt > 4:136030‑M1/136‑149 (MQ=255) gAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGAAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccc < 5:402819‑M2/149‑12 (MQ=255) aGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggcc > 7:112680‑M2/1‑137 (MQ=255) ggCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccc < 1:70949‑M2/149‑14 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAAt < 7:245361‑M1/17‑1 (MQ=255) gCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccct < 4:174079‑M2/149‑15 (MQ=255) gCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTCCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccct < 1:349992‑M2/149‑15 (MQ=255) gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATca < 4:367938‑M1/19‑1 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGt < 6:166343‑M1/2‑1 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCa < 7:84726‑M1/24‑1 (MQ=255) gaCAAAAGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTATACTCTTTCTCTGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatc < 3:224121‑M2/148‑20 (MQ=255) aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca > 7:214319‑M2/1‑126 (MQ=255) aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc < 8:109397‑M2/147‑22 (MQ=255) aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCAtt > 4:52865/1‑147 (MQ=255) aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc < 4:69147‑M2/146‑22 (MQ=255) aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAg > 8:76594/1‑149 (MQ=255) ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGa < 3:357720‑M1/31‑1 (MQ=255) agaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaac > 6:142929‑M2/1‑120 (MQ=255) gaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAgcg < 8:233010‑M1/36‑1 (MQ=255) aaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccag > 5:82083‑M2/1‑118 (MQ=255) cTGGCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaat > 2:64078‑M2/1‑116 (MQ=255) tCTAATGCTTAGACCTGAAAATGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCTGAGTAACTATAACCGTAATAGTTATATCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatat > 4:224121‑M2/1‑113 (MQ=255) tAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcac < 3:273418‑M2/149‑39 (MQ=255) aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcact > 7:435724‑M2/1‑109 (MQ=255) aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcac > 1:94011‑M2/1‑109 (MQ=255) aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTa < 2:367143/146‑1 (MQ=255) tAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaat < 3:252567‑M2/148‑45 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgc < 7:440586‑M1/52‑1 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgc < 8:125399‑M1/52‑1 (MQ=255) aCCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 7:305259‑M2/149‑49 (MQ=255) cGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagcctggccccctgaatctccagacaaccaatatcacttaaataagtga < 5:385989‑M2/149‑51 (MQ=255) ggAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtga < 2:414432‑M2/148‑51 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat < 6:415095‑M1/46‑1 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat > 5:415095‑M1/92‑137 (MQ=255) gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt < 3:396832‑M2/148‑58 (MQ=255) gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTcc < 6:228438/149‑1 (MQ=255) gcgctcgccacgggaatatcttcgtcagcgggcttgtaatgggttaactgatagcagatgtctggaaatataggggcaactccaGTGCTGGCGCGTTTAATCACACCCTTGACTATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa > 1:209323‑M1/85‑148 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 1:369703‑M2/1‑83 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca < 6:59604‑M2/106‑24 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca > 6:392709‑M2/1‑83 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGGAACTGTAAGCGGTGCTtagactggccccctgaatctcca < 5:392709‑M2/106‑24 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGAGCCTTTAATATTGACGCCTGCATGTTCCAGACgcagca < 5:279445‑M1/73‑1 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCAt < 5:166547‑M1/74‑1 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCAtt < 1:210483‑M1/75‑1 (MQ=255) cATCCGGCCACTTTCAGTTTTTCTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCATAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 2:125245‑M2/1‑79 (MQ=255) aTCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 4:396832‑M2/1‑78 (MQ=255) gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGAc > 3:367938‑M1/72‑149 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGTTAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACt < 4:342166‑M1/83‑1 (MQ=255) gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACctc < 5:177271‑M1/89‑1 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACctct > 2:301080‑M1/60‑149 (MQ=255) aGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga > 3:174079‑M2/1‑64 (MQ=255) ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 8:305062‑M2/149‑88 (MQ=255) ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 5:365771‑M2/1‑62 (MQ=255) ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 6:365771‑M2/127‑66 (MQ=255) tACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac > 8:305259‑M2/1‑59 (MQ=255) tctTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 8:32755‑M2/1‑56 (MQ=255) tttCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga < 7:382349‑M2/149‑96 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCTCACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAACCTCACCTCTTTGGCGGTGTTc < 2:136581‑M1/102‑1 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTc < 1:294708‑M1/102‑1 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAg > 7:299793‑M1/44‑148 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGc > 2:382692‑M1/44‑149 (MQ=255) ggAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 8:394878‑M2/1‑48 (MQ=255) gAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat < 1:396824‑M2/147‑101 (MQ=255) gAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 2:396824‑M2/1‑47 (MQ=255) aacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACgcgc < 5:297070‑M1/116‑1 (MQ=255) aaCCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 7:152343‑M2/149‑113 (MQ=255) ccGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga < 3:87117‑M2/149‑115 (MQ=255) ccGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga > 2:349992‑M2/1‑35 (MQ=255) cagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAAc < 1:102747‑M1/119‑1 (MQ=255) cGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 1:106009‑M2/146‑113 (MQ=255) tAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 3:219714‑M2/103‑72 (MQ=255) tAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 4:219714‑M2/1‑32 (MQ=255) tctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACcagcag < 2:276507‑M1/125‑1 (MQ=255) ctgtaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAAccagcac > 5:281650‑M1/24‑147 (MQ=255) aGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga > 7:26305‑M2/1‑28 (MQ=255) aGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 8:26305‑M2/101‑74 (MQ=255) tggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa > 7:350526‑M1/23‑86 (MQ=255) tggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa < 8:350526‑M1/64‑1 (MQ=255) gTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 2:421119‑M2/147‑121 (MQ=255) gCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacgg > 6:185230‑M2/1‑21 (MQ=255) taggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGcc > 2:210483‑M1/15‑148 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 4:293428‑M2/1‑19 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct > 7:407960‑M2/1‑19 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct < 8:407960‑M2/75‑57 (MQ=255) ggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCaa > 4:348248‑M1/11‑114 (MQ=255) tGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca < 7:308043‑M2/149‑137 (MQ=255) tAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct < 6:873‑M2/115‑105 (MQ=255) gCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga > 4:273418‑M2/1‑8 (MQ=255) gTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacatatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaa > 2:28950‑M2/1‑5 (MQ=255) | TTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAACGCCCCAC > NC_000913/1041937‑1042233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |