New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1474033 =	95 (0.950)	7 (0.080)	7/260	10.0	7.2%	intergenic (+20/‑188)	ydbA/ydbC	pseudogene, autotransporter homolog; interrupted by IS2 and IS30/putative NAD(P)‑binding oxidoreductase
	?	NC_000913	1474063 =	93 (1.010)					intergenic (+50/‑158)	ydbA/ydbC	pseudogene, autotransporter homolog; interrupted by IS2 and IS30/putative NAD(P)‑binding oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATAC  >  NC_000913/1473886‑1474181                                                                                                                                                    |                                                                                                                                                     aTAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAACCGTTCAAATTTTTAGCATGTGATCCCTa                                                                                                                                                      >  2:312536/1‑148 (MQ=255) aTAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTa                                                                                                                                                      >  5:131611/1‑148 (MQ=255)  tAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTaaa                                                                                                                                                    <  5:1856/149‑1 (MQ=255)     ccTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCg                                                                                                                                                 >  8:347724/1‑149 (MQ=255)       tGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGc                                                                                                                                                >  2:158266/1‑148 (MQ=255)       tGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCa                                                                                                                                               >  2:415496/1‑149 (MQ=255)        gACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCaa                                                                                                                                              >  6:286798/1‑149 (MQ=255)           aaGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGc                                                                                                                                           <  3:270550/149‑1 (MQ=255)                tCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATa                                                                                                                                      <  8:268557/149‑1 (MQ=255)                   gCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAg                                                                                                                                   <  3:84423/149‑1 (MQ=255)                    cGTGAAGTACAGCAGCAAAGATAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAgg                                                                                                                                  <  6:33018/149‑1 (MQ=255)                     gTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGt                                                                                                                                 >  6:366195/1‑149 (MQ=255)                            aCAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtt                                                                                                                          >  7:255070/1‑149 (MQ=255)                               gcagcaAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGttttt                                                                                                                       >  3:289959/1‑149 (MQ=255)                                cagcaAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtttttt                                                                                                                      >  7:126039/1‑149 (MQ=255)                                  gcaAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTa                                                                                                                    >  2:85115/1‑149 (MQ=255)                                   caAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTAt                                                                                                                   >  6:49063/1‑149 (MQ=255)                                    aaagaaagTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGa                                                                                                                                        <  3:99988/127‑1 (MQ=255)                                    aaagaaagTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGa                                                                                                                                        >  4:99988/1‑127 (MQ=255)                                     aagaaagTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGGGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTg                                                                                                                 <  5:349183/149‑1 (MQ=255)                                      agaaagTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATATTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGc                                                                                                                >  2:4585/1‑149 (MQ=255)                                       gaaagTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGCGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGcc                                                                                                               >  8:330968/1‑149 (MQ=255)                                            ttCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATCGCAGCAGCGATAAAGGCCTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAtg                                                                                                          <  8:281757/149‑1 (MQ=255)                                            ttCGCTGAATATGGATGCGTACAACTGGAAATAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTAAAGAAAACTTTCTAATTTTTAGCATTTGATAACTAAACCTCAACGCTGATACAGGTTGAGGTTTTTTTATTGCCTGAtg                                                                                                          >  6:5810/1‑149 (MQ=255)                                             tCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCAACAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAtgt                                                                                                         >  7:215266/1‑149 (MQ=255)                                                 tGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTa                                                                                                     >  7:368664/1‑149 (MQ=255)                                                   aaTCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACg                                                                                                   >  7:9883/1‑149 (MQ=255)                                                   aaTCTGGATGCGGACAACTTGAAAGAGGATGGCATCAGCGATAAATGCGTGATGCTGAACTTCAAGAAACCGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAGGTGGTAc                                                                                                    <  8:307731/148‑1 (MQ=255)                                                     tCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGt                                                                                                  >  6:289145/1‑148 (MQ=255)                                                       tGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGAc                                                                                               >  6:323183/1‑149 (MQ=255)                                                        ggATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGAcg                                                                                              >  4:276790/1‑149 (MQ=255)                                                            gCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAtg                                                                                                          <  2:222968/133‑1 (MQ=255)                                                            gCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAtg                                                                                                          >  1:222968/1‑133 (MQ=255)                                                             cGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttt                                                                                         <  8:9883/149‑1 (MQ=255)                                                              gTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgtttt                                                                                        >  2:181199/1‑149 (MQ=255)                                                               tACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgtt                                                                                          <  7:364725/146‑1 (MQ=255)                                                               tACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgtt                                                                                          >  8:364725/1‑146 (MQ=255)                                                                  aaCTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAATAAAACGTTCTATTTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgttt                                                                                    >  4:246601/1‑149 (MQ=255)                                                                  aaCTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgttt                                                                                    >  4:133161/1‑149 (MQ=255)                                                                   aCTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATGCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtttt                                                                                   <  1:73107/149‑1 (MQ=255)                                                                   aCTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtttt                                                                                   <  6:131611/149‑1 (MQ=255)                                                                     tGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTtttgttttgt                                                                                 >  4:393282/1‑149 (MQ=255)                                                                       gacagagGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAATAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACTCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTgtgt                                                                               <  5:281248/146‑1 (MQ=255)                                                                          agagGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCtt                                                                            <  8:39130/149‑1 (MQ=255)                                                                             ggATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCa                                                                         <  3:276790/149‑1 (MQ=255)                                                                             ggATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCa                                                                         <  1:224457/149‑1 (MQ=255)                                                                             ggATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGGTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCa                                                                         <  1:415496/149‑1 (MQ=255)                                                                               aTGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAg                                                                        >  2:15613/1‑148 (MQ=255)                                                                                tGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGa                                                                      <  3:32105/149‑1 (MQ=255)                                                                                   cATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATATTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACaa                                                                   <  1:4585/149‑1 (MQ=255)                                                                                    aTCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTATCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGTATGTGTTACTTGAGGCTTTTTGTTGTGTTTATTTCAGGACaa                                                                   >  4:44013/1‑148 (MQ=255)                                                                                     tCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGa                                                                      >  7:105290/1‑144 (MQ=255)                                                                                     tCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGa                                                                      <  8:105290/144‑1 (MQ=255)                                                                                     tCAGCGATAAAGGAGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGCTCCCTAAACCGCAACGCTGATACAGGGTGCGGTGTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGGTTTGTTTCTTTCAGGaaaa                                                                   >  4:213483/1‑147 (MQ=255)                                                                                       aGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGGTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATaga                                                               <  5:49063/149‑1 (MQ=255)                                                                                        gCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATagag                                                              <  1:85115/149‑1 (MQ=255)                                                                                          gATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTACAATGTGATCCCTAAACCGCAACGATGATACAGCTTGCGGTTTTTATATTGCAGGATGTGGTACTTg                                                                                                 >  4:17843/1‑112 (MQ=255)                                                                                           aTAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCaa                                                           >  8:231014/1‑149 (MQ=255)                                                                                            tAAAGGCGTTATGCTGAACTTCAAGAAAATGTGCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTTTTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAAc                                                          <  1:312536/149‑1 (MQ=255)                                                                                                ggCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAgg                                                                       >  2:98534/1‑132 (MQ=255)                                                                                                ggCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAgg                                                                       <  1:98534/132‑1 (MQ=255)                                                                                                    tGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAg                                                  <  3:133161/149‑1 (MQ=255)                                                                                                    tGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAg                                                  <  3:393282/149‑1 (MQ=255)                                                                                                        gCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttg                                                                                       >  3:359681/1‑108 (MQ=255)                                                                                                        gCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttg                                                                                       <  4:359681/108‑1 (MQ=255)                                                                                                          tGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCt                                            >  1:385397/1‑149 (MQ=255)                                                                                                            aaCTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTg                                          <  4:289959/149‑1 (MQ=255)                                                                                                            aaCTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTg                                          <  3:347813/149‑1 (MQ=255)                                                                                                               ttCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGttt                                       <  5:2537/149‑1 (MQ=255)                                                                                                               ttCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGtt                                        >  8:245431/1‑148 (MQ=255)                                                                                                                            tCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACCCCTTCGCat                           >  6:81949/1‑148 (MQ=255)                                                                                                                            tCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTc                               >  2:63410/1‑144 (MQ=255)                                                                                                                            tCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTc                               <  1:63410/144‑1 (MQ=255)                                                                                                                              tAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTc                               >  5:121705/1‑142 (MQ=255)                                                                                                                              tAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCattat                        >  6:322260/1‑149 (MQ=255)                                                                                                                              tAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGAGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTc                               <  6:121705/142‑1 (MQ=255)                                                                                                                                aTTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCAttattt                      <  5:289145/149‑1 (MQ=255)                                                                                                                                 tttttAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCAttattta                     >  1:240902/1‑149 (MQ=255)                                                                                                                                    ttAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTAtct                  >  3:86255/1‑149 (MQ=255)                                                                                                                                      aGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTAtctc                 <  7:330968/148‑1 (MQ=255)                                                                                                                                        cATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCttt              >  7:32428/1‑149 (MQ=255)                                                                                                                                         aTGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGTACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCAttattt                      <  6:8814/140‑1 (MQ=255)                                                                                                                                         aTGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCAttattt                      >  5:8814/1‑140 (MQ=255)                                                                                                                                         aTGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCtttt             >  3:248905/1‑149 (MQ=255)                                                                                                                                          tgtgATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGtt                                        <  8:109650/121‑1 (MQ=255)                                                                                                                                          tgtgATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGtt                                        >  7:109650/1‑121 (MQ=255)                                                                                                                                          tgtgATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTc            <  4:248905/149‑1 (MQ=255)                                                                                                                                            tgATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGt          <  2:240902/149‑1 (MQ=255)                                                                                                                                             gATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGtt         >  1:229859/1‑149 (MQ=255)                                                                                                                                              aTCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGttt        >  2:344039/1‑149 (MQ=255)                                                                                                                                              aTCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGttt        >  7:276876/1‑149 (MQ=255)                                                                                                                                              aTCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGttt        >  1:121787/1‑149 (MQ=255)                                                                                                                                                 ccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCta     >  4:311697/1‑149 (MQ=255)                                                                                                                                                 ccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCt      <  5:323183/148‑1 (MQ=255)                                                                                                                                                  cTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACTCCTTCGCATTATTTATCTCTTTTCGTTTCta     >  5:228643/1‑148 (MQ=255)                                                                                                                                                    aaaCCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGGTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATAc  >  1:62601/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATAC  >  NC_000913/1473886‑1474181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.