New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4104862 =128 (1.470)3 (0.040) 3/248 NT 2.4% coding (114/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR
?NC_000913 4104892 = 124 (1.500)coding (84/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR
Rejected: Frequency below/above cutoff threshold.

Only 100 of 151 total aligned reads displayed.

CAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGC  >  NC_000913/4104715‑4105008
                                                                                                                                                   |                                                                                                                                                  
cAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGaa                                                                                                                                                   <  7:206992/149‑1 (MQ=255)
 aaagatggtcacccgtggtttaaaaccttgcgtggtcgcggctatctgatggtttctgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggctgacgctggcgctggtgttgatgttggttttgatgttacccAAg                                                                                                                                                  <  6:100651‑M1/3‑1 (MQ=255)
 aaTAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAg                                                                                                                                                  >  4:271124/1‑149 (MQ=255)
     atggtcacccgtgggttaataccttgagtgggcgctgctatctgatggtttctgcttcaagataggcagcgtaaccgcgcgcatcttcgccatcttctgggtgacgctggcgctggtgttgatgttggttttgatgttacccAAGCTCg                                                                                                                                              >  6:126462‑M1/143‑149 (MQ=255)
      cAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCgg                                                                                                                                             >  2:187303/1‑149 (MQ=255)
           gCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATc                                                                                                                                        >  2:383916/1‑149 (MQ=255)
                 cTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGt                                                                                                                                  >  7:407929/1‑149 (MQ=255)
                 cTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGt                                                                                                                                  <  1:383916/149‑1 (MQ=255)
                  tGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGt                                                                                                                                  >  1:7437/1‑148 (MQ=255)
                    gCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGaa                                                                                                                               <  6:7751/149‑1 (MQ=255)
                              cTTCTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCACCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                     <  6:343968/149‑1 (MQ=255)
                              cTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACCCTGTTCGCTATCCAGAAGCt                                                                                                                                                >  2:352989/1‑122 (MQ=255)
                               cgtggtcgcggctatctgatggtttctgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggctgacgctggcgctggtgttgatgttggttttgatgttacccAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                     >  5:28839‑M1/117‑148 (MQ=255)
                                 aTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCCGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGt                                                                                                                   >  1:111873/1‑148 (MQ=255)
                                 aTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGCGCTTGGGt                                                                                                                   >  3:136186/1‑148 (MQ=255)
                                 aTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGt                                                                                                                   >  6:332661/1‑148 (MQ=255)
                                 aTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGt                                                                                                                   <  8:132668/148‑1 (MQ=255)
                                  tCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGc                                                                                                                                                 >  2:129753/1‑117 (MQ=255)
                                  tCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGc                                                                                                                                                 <  1:129753/117‑1 (MQ=255)
                                  tCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTaa                                                                                                                 <  4:355904/149‑1 (MQ=255)
                                   cAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCACGGTCATCAGGCGTGAATCGAGCTTGGGTaa                                                                                                                 >  8:302765/1‑148 (MQ=255)
                                     aTCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                     >  5:21145/1‑142 (MQ=255)
                                     aTCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTCAATCGAGCTTGGGTAACaa                                                                                                              >  3:265127/1‑148 (MQ=255)
                                      tCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACAt                                                                                                              >  4:187602/1‑148 (MQ=255)
                                        gCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTg                                                                                                                      >  4:359139/1‑138 (MQ=255)
                                        gCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTg                                                                                                                      <  3:359139/138‑1 (MQ=255)
                                         cccGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGAACGTTCGCCAGCTCCGCTTCCACATGCTGCTCAATCATCAGCCCCTCACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGATACGAGCATGGGTAAcaacaa                                                                                                           >  8:255391/1‑148 (MQ=255)
                                          ccGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCaaaa                                                                                                         >  6:201395/1‑149 (MQ=255)
                                          ccGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCaaaa                                                                                                         <  3:158762/149‑1 (MQ=255)
                                             gAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAAcc                                                                                                       >  1:88651/1‑148 (MQ=255)
                                              aaCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCaa                                                                                                     <  5:123616/149‑1 (MQ=255)
                                              aaCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCaa                                                                                                     >  1:99177/1‑149 (MQ=255)
                                               aCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAAc                                                                                                    <  7:380516/149‑1 (MQ=255)
                                               aCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAAc                                                                                                    <  7:302765/149‑1 (MQ=255)
                                                  gACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATc                                                                                                 <  5:386710/149‑1 (MQ=255)
                                                     gccgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAac                                                                                              <  3:22431/149‑1 (MQ=255)
                                                      ccgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAaca                                                                                             <  3:33326/149‑1 (MQ=255)
                                                       cgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAacac                                                                                            <  5:279599/149‑1 (MQ=255)
                                                       cgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAacac                                                                                            <  4:242015/149‑1 (MQ=255)
                                                         tgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggctgacgctggcgctggtgttgatgttggtcttgatgttacccAAGCTCGGTCATCTGGCGTGAATCGAGCTTggg                                                                                                                    >  1:110007‑M1/91‑123 (MQ=255)
                                                            ccacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcg                                                                                       >  3:43619/1‑149 (MQ=255)
                                                             cacaTTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcgc                                                                                      >  3:134893/1‑149 (MQ=255)
                                                                 ttAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcgccagc                                                                                  >  7:132516/1‑149 (MQ=255)
                                                                     aTCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGt                                                                                >  3:146617/1‑147 (MQ=255)
                                                                     aTCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCGCGGTCATCAGGCGTGAATCGAGCTTGGGGAACATCAAACCCACCATCAACACCAGCGCCAGCGt                                                                                >  5:302806/1‑147 (MQ=255)
                                                                        gTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGc                                                                            <  5:233014/148‑1 (MQ=255)
                                                                         ttGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCa                                                                          <  4:146617/149‑1 (MQ=255)
                                                                            ggCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCagaa                                                                       <  5:383361/149‑1 (MQ=255)
                                                                              cGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCagaaga                                                                     <  5:201395/149‑1 (MQ=255)
                                                                               ggATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGAt                                                                    >  2:154817/1‑149 (MQ=255)
                                                                                    gTTCGCCAGCTCCGCTT‑‑ACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGaa                                                              <  8:126410/148‑1 (MQ=255)
                                                                                        gCCTGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            <  3:271124/148‑1 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGTGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            <  7:255391/148‑1 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGAt                                                                    <  4:233108/140‑1 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGAt                                                                    >  3:233108/1‑140 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            <  1:187303/148‑1 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAt                                                           <  6:245792/149‑1 (MQ=255)
                                                                                        gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCAAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATAAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAt                                                           >  8:4648/1‑149 (MQ=255)
                                                                                        gCCAGCTCCGCTGCGACATGCTGCTCACTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGCTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            <  5:118046/148‑1 (MQ=255)
                                                                                              tCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATgcgcgc                                                     >  2:265798/1‑149 (MQ=255)
                                                                                                  cTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGt                                                  >  4:119740/1‑148 (MQ=255)
                                                                                                      gACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAac                                                                                              >  8:153585/1‑100 (MQ=255)
                                                                                                      gACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAac                                                                                              <  7:153585/100‑1 (MQ=255)
                                                                                                         aTGCTTCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAAGATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGc                                          <  1:48730/149‑1 (MQ=255)
                                                                                                             tgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGtt                                                 >  5:276793/1‑138 (MQ=255)
                                                                                                             tgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGtt                                                 <  6:276793/138‑1 (MQ=255)
                                                                                                               ctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTTCCTATCa                                    <  2:43040/149‑1 (MQ=255)
                                                                                                                tCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAACACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCAAAGATGCGCGCGGTTAAGCTGCCTATCAt                                   >  3:102314/1‑149 (MQ=255)
                                                                                                                  aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACCTCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCAt                                   <  7:255879/147‑1 (MQ=255)
                                                                                                                  aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATg                                                                   <  2:276570/115‑1 (MQ=255)
                                                                                                                  aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATg                                                                   >  1:276570/1‑115 (MQ=255)
                                                                                                                  aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATg                                  >  3:259252/1‑148 (MQ=255)
                                                                                                                   atcatcAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGaa                                <  6:388535/149‑1 (MQ=255)
                                                                                                                      atcaGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                               >  1:372947/1‑147 (MQ=255)
                                                                                                                           ccccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAc                        >  2:48378/1‑149 (MQ=255)
                                                                                                                            cccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAc                        >  4:216391/1‑148 (MQ=255)
                                                                                                                             ccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                     <  4:111464/54‑1 (MQ=255)
                                                                                                                             ccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                     >  3:111464/1‑54 (MQ=255)
                                                                                                                              cTGACGCTGTTCGCTATCCGGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATGAACACCCGCGGCAGCGTCAGCCAGAAGATGGCGAAGGTGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                     >  6:138248/1‑149 (MQ=255)
                                                                                                                              cTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                     >  1:257698/1‑149 (MQ=255)
                                                                                                                              cTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                     >  5:242760/1‑149 (MQ=255)
                                                                                                                              cTGACGCTGTTCGCTATCCAGAAGATAGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAAAACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                     <  4:21327/149‑1 (MQ=255)
                                                                                                                               tGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            <  3:78588/109‑1 (MQ=255)
                                                                                                                               tGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                            >  4:78588/1‑109 (MQ=255)
                                                                                                                                 aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                    <  2:111873/147‑1 (MQ=255)
                                                                                                                                 aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGAGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAACGACAGCGTCAGCCAGAAGATGCCGAAGATGAGCGCGGTTAAGCTGCCTATAATGAAGCAGAAACCAt                     >  4:197032/1‑146 (MQ=255)
                                                                                                                                   gCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCa                   >  8:324480/1‑146 (MQ=255)
                                                                                                                                       ttCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCa                                                                              >  4:371829/1‑83 (MQ=255)
                                                                                                                                       ttCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCa                                                                              <  3:371829/83‑1 (MQ=255)
                                                                                                                                            tATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAc       >  8:306435/1‑149 (MQ=255)
                                                                                                                                            tATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAc       >  8:371039/1‑149 (MQ=255)
                                                                                                                                             aTCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAc       >  5:100651/1‑148 (MQ=255)
                                                                                                                                              tCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGaa                                >  7:278187/1‑122 (MQ=255)
                                                                                                                                                cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAAGATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGATGATGCGCGCGGTTAAGCTGCCTATCAGGAAGCAGAACCCATCAGATAGCCGCGacgacg   >  2:308853/1‑149 (MQ=255)
                                                                                                                                                cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                               <  8:138308/121‑1 (MQ=255)
                                                                                                                                                cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                               >  7:138308/1‑121 (MQ=255)
                                                                                                                                                cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCAc    <  2:372947/148‑1 (MQ=255)
                                                                                                                                                  gAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGc  >  8:114671/1‑148 (MQ=255)
                                                                                                                                                  gAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGc  >  4:51454/1‑148 (MQ=255)
                                                                                                                                                   AAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGc  <  3:249021‑M1/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CAATAACAAACGCTGTCCTGGCGGTGCCCACTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGC  >  NC_000913/4104715‑4105008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.