Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 758,983 | T→A | 67.2% | L93Q (CTG→CAG) | sucA → | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 758,983 | 0 | T | A | 67.2% | 88.3 / 81.0 | 89 | L93Q (CTG→CAG) | sucA | 2‑oxoglutarate decarboxylase, thiamine triphosphate‑binding |
Reads supporting (aligned to +/- strand): ref base T (14/15); new base A (33/27); total (47/42) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.52e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.63e-01 |
TCCAGCAGTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAAC > NC_000913/758839‑759125 | tCCAGCAGTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTATAAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAAAGAGCAGCAGGTTAAAGTCAAGCAg > 8:186976/1‑149 (MQ=255) cagcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCt > 4:111621/1‑143 (MQ=255) cagcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCt < 3:111621/143‑1 (MQ=255) cagcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCt < 8:144371/149‑1 (MQ=255) cagcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTACGACCCTGACACCAATGTGAAGCAGGTTAAAGTCAAGCAGCt > 7:77476/1‑149 (MQ=255) gcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCa > 6:351103/1‑149 (MQ=255) gcagTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCa < 4:260384/149‑1 (MQ=255) aCCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACg > 2:355241/1‑149 (MQ=255) ccTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACg > 4:108711/1‑148 (MQ=255) cTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCa > 3:82604/1‑149 (MQ=255) cTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGAGCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCa < 6:223832/149‑1 (MQ=255) gTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATa < 2:27653/148‑1 (MQ=255) gTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATAc > 4:326878/1‑149 (MQ=255) cGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCg < 1:355241/148‑1 (MQ=255) ggAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGCCCCTGACACCAATGTGAGGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCtt > 2:193567/1‑149 (MQ=255) gAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTc > 4:85151/1‑149 (MQ=255) tCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCACCGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGt > 1:334080/1‑149 (MQ=255) tCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGt > 1:2525/1‑149 (MQ=255) aaaCCGGATCAATTCCACTCTCAAAGGCGGGAATATTTCCGCCGCCTGGCGAAAGACGATTCACGTTACGCTTCAACGATCTCCGACCCTGACACCAATGGGAAGCAGGTTACCGTCCAGCAGCTCATTCACGCATACCGCTTCCGTg < 1:275158/148‑1 (MQ=255) aaaCCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGCCCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTgg > 2:295093/1‑149 (MQ=255) aaaCCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTgg > 8:347374/1‑149 (MQ=255) aaaCCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTg < 2:167375/148‑1 (MQ=255) aaaCCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTg < 3:334244/148‑1 (MQ=255) aaCCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCAGACTTGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTTAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATAACGCTTCCGTGGt < 7:236970/149‑1 (MQ=255) ggATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGGCAcc < 8:108962/149‑1 (MQ=255) gATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCAc > 8:118832/1‑147 (MQ=255) gATCAATTCCACTCTCAAACGCGGGAATATTTCCGCCGCCTGGCGAAAGACGCGTCACGTTAATCTTCCACGATCTCCGCCCCTGACCCCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTACCGCATACCGCTTCCGTGGTCAc > 6:328886/1‑147 (MQ=255) aTTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATg > 3:233332/1‑149 (MQ=255) aTTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATg > 3:63297/1‑149 (MQ=255) aTTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATg > 3:356524/1‑149 (MQ=255) aTTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATg > 1:199433/1‑149 (MQ=255) cACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGaa > 3:138617/1‑149 (MQ=255) cACTCTCAAACGCGTGAATATATCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGa < 8:145248/148‑1 (MQ=255) ctctCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAAtc > 4:227888/1‑149 (MQ=255) ctctCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAAtc < 7:118832/149‑1 (MQ=255) tctcAAACGCGTGAATATTTCAGCCGCCAGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTACGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAAtct > 3:221587/1‑149 (MQ=255) tcAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAAtctc > 1:115257/1‑148 (MQ=255) tcAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGAGCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAAtct < 4:127814/147‑1 (MQ=255) aaaCGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCGTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAGTCTCGAt > 8:161875/1‑149 (MQ=255) aaaCGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCATGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCg < 8:293106/147‑1 (MQ=255) aaaCGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGAt < 5:314910/149‑1 (MQ=255) aCGCGTGAATATTTCCGCCGCCTGGCGAAAGCCGCTTCACGTTTCTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGCTcc > 2:177193/1‑149 (MQ=255) cgTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCGTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAGTCTCGATCCGCt < 7:161875/149‑1 (MQ=255) gTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGCCCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTg > 1:22362/1‑149 (MQ=255) gTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTg > 8:3757/1‑149 (MQ=255) gTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTg > 7:57441/1‑149 (MQ=255) gTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATATGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTg < 6:181634/149‑1 (MQ=255) tGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTgg < 3:326878/149‑1 (MQ=255) tGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTgg < 7:3757/149‑1 (MQ=255) tGAATATTTCCGCCGCCTGGAGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGAGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTgg < 8:202098/149‑1 (MQ=255) atTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACtg > 1:358533/1‑149 (MQ=255) tttCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACtgt < 3:27817/149‑1 (MQ=255) tttCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACtg < 3:108711/148‑1 (MQ=255) ttCCGCCGCCTGGCGAAAGACGCTTCAAGTTACTCTTCAACGATCTCAGACCCTGACACCAATGGGACTCAGTTTAAAGTCCAGCAGCACATTAACGCATACCGCTTCCGTTGTCACCAGCATGCGAATCTCGATCCGCTGGGACtgt < 8:77476/148‑1 (MQ=255) cgccgcCTTGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGCCCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGgca < 7:186976/149‑1 (MQ=255) cgccgcCTGGCGAATGACGCTTCACGTTACTCTTGAACGATCTGCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCCGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGgca < 1:155256/149‑1 (MQ=255) cgccgcCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTgg > 3:277240/1‑147 (MQ=255) ccgccTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGgcagc < 2:2525/149‑1 (MQ=255) gccTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCaa < 2:358533/149‑1 (MQ=255) gccTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGAACCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCaa < 3:227888/149‑1 (MQ=255) ccTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAg < 3:339818/149‑1 (MQ=255) cGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATaaa < 1:10565/149‑1 (MQ=255) gACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGc > 2:205941/1‑149 (MQ=255) aCGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGcc > 7:343070/1‑149 (MQ=255) aCGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGcc > 2:387459/1‑149 (MQ=255) cACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATaaa > 6:34920/1‑137 (MQ=255) cACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATaaa < 5:34920/137‑1 (MQ=255) cACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCt < 4:356524/148‑1 (MQ=255) ctctTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGt < 3:85151/149‑1 (MQ=255) ctTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGGCt > 4:351609/1‑149 (MQ=255) ttCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCtt > 5:56158/1‑149 (MQ=255) ttCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCtt > 8:154609/1‑149 (MQ=255) cAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATACGTCttt > 7:74792/1‑148 (MQ=255) gATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCAc > 2:159961/1‑148 (MQ=255) aTCTCCGCCCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACg > 4:39968/1‑148 (MQ=255) tctcCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGAt > 8:159953/1‑149 (MQ=255) cGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCTCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATc < 4:138617/146‑1 (MQ=255) cGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGa < 2:199433/149‑1 (MQ=255) cTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGaa < 4:233332/149‑1 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGAt > 6:237423/1‑124 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGAt < 5:237423/124‑1 (MQ=255) acacCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGc < 3:351609/148‑1 (MQ=255) acacCAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAg > 2:275898/1‑147 (MQ=255) acacCAATGTGAAGCAGGTTAAACTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTGTTTCCACGATCTGACCGAAg < 4:123727/147‑1 (MQ=255) cAATGTGAAGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACt > 8:395455/1‑149 (MQ=255) tgtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCTCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTcc < 2:115257/149‑1 (MQ=255) tgAAGCAGGATAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATATAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa < 1:346761/148‑1 (MQ=255) aaGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAg > 8:151691/1‑147 (MQ=255) aGCAGGTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGATTCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGgag < 4:277240/149‑1 (MQ=255) gTTAAAGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCtt > 1:210915/1‑149 (MQ=255) aaGTCCAGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGAAGCAAGATAAAGTGGCCTATCTGGATCCGTCTTTCCCCGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAAc > 8:17240/1‑149 (MQ=255) | TCCAGCAGTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAAC > NC_000913/758839‑759125 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |