Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913422,4290TG21.4% 202.8 / 17.8 105intergenic (+70/‑89)proY/malZproline‑specific permease/maltodextrin glucosidase
Reads supporting (aligned to +/- strand):  ref base T (19/62);  new base G (21/1);  total (42/63)
Fisher's exact test for biased strand distribution p-value = 5.52e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 110 total aligned reads displayed.

GCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAA  >  NC_000913/422285‑422574
                                                                                                                                                |                                                                                                                                                 
gcgTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGtcctc                                                                                                                                               >  3:471796/1‑149 (MQ=255)
  gTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGgccgcgg                                                                                                                                             >  2:98356/1‑145 (MQ=255)
        tgttgtGCTGTTGATTGGCTGTATGTTTAAACGCCGCCAAGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTGCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTccccc                                                                                                                                        <  5:156688/148‑1 (MQ=255)
          ttgtGCTGTTGATTGGCTGGATGTTTAAACGGCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCaaa                                                                                                                                     <  1:348712/149‑1 (MQ=255)
          ttgtGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCaa                                                                                                                                      <  1:13843/148‑1 (MQ=255)
            gtgCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAat                                                                                                                                    <  7:194458/148‑1 (MQ=255)
                tGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCGGGCGTCCTCCCCCCAATATCCt                                                                                                                               >  1:1499/1‑149 (MQ=255)
                  ttGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCt                                                                                                                               <  2:221083/147‑1 (MQ=255)
                  ttGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTc                                                                                                                             <  2:246271/149‑1 (MQ=255)
                  ttGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCACAAATATCCt                                                                                                                               <  5:215088/147‑1 (MQ=255)
                    taTTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGATATCCTGCTCCGGCGATTCCGAAAGTTATCCGCCCCCGTCGTCCTCCCCCACAGAACCtt                                                                                                                              >  2:393941/2‑146 (MQ=255)
                     aTTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATACGCCCCAGTCCTCCTCCCCCAAATATCCTTCAga                                                                                                                          <  1:357397/149‑1 (MQ=255)
                         gCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAgatgat                                                                                                                      <  6:540086/149‑1 (MQ=255)
                           tGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCACCCCCACATAGACGTCAgatgat                                                                                                                      >  3:39068/1‑147 (MQ=255)
                             gATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAg                                                                                                                   <  8:476388/148‑1 (MQ=255)
                             gATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGt                                                                                                                  <  4:624982/149‑1 (MQ=255)
                               tGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGTCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCaaa                                                                                                                                     <  5:175179/128‑1 (MQ=255)
                                 tttAAACGCCGCCACGATCGTCAGCTGGCTGATAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCAGACACCTGAGTCCTCACACAAATATACTTCAGAttatgatctaaa                                                                                                              >  2:240117/1‑143 (MQ=255)
                                    aaaCGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCt                                                                                                            <  4:688811/148‑1 (MQ=255)
                                    aaaCGCAGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCTCCCCCCAATATCCGTCAGATGATGAGTGGTGCTg                                                                                                           >  1:183827/1‑149 (MQ=255)
                                     aaCGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCGCCCCCCAAGAACCAGCAGATGAGGCGTGGTCATg                                                                                                           >  8:507883/1‑148 (MQ=255)
                                     aaCGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCCGCCCCCAAATAACCTACAGATGATGAGTGATACTg                                                                                                           >  8:450145/1‑148 (MQ=255)
                                       cgccgcCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCTCCCCCAACTATCCTTCAGAGGAGGAGTGATGCTGCAt                                                                                                        >  2:3926/1‑149 (MQ=255)
                                             cACGATCTTCAGCTGGCTTAAAAACAGTAATCCTTGCGTTCTTTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCt                                                                                                  <  1:240117/149‑1 (MQ=255)
                                              aCGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCGCCGGCCGCCTCCCCCCAATATAGTTCAGATCATGAGTGATCCTGCATTAGGGTa                                                                                                 >  8:527757/1‑149 (MQ=255)
                                              aCGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTa                                                                                                 <  7:507883/149‑1 (MQ=255)
                                                gATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCCGCCGCAACCCCCAAATAACCTTAAGATGAAAAATGAAACTGAATTAgatatcg                                                                                               >  2:422397/1‑143 (MQ=255)
                                                gATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCAt                                                                                                        <  7:453666/140‑1 (MQ=255)
                                                gATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTa                                                                                                      <  1:422397/142‑1 (MQ=255)
                                                gATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCACCCACCGCCTCCCCCCAATATCCAAAAAATGAAGAGTAATACTGCAATataaggg                                                                                                >  8:453666/1‑142 (MQ=255)
                                                 aTCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCCGCCGCCGCCCCCAACTAACCTTCAGATGATGAGTGAGCCTGCCTTCTGGTATgg                                                                                              >  5:413522/1‑149 (MQ=255)
                                                    gTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCGTCCTCCGCCCCCAAAAATCCTTCAGATGATGAGTGATCCTGAATTAGGGTATTGc                                                                                             >  2:764397/1‑147 (MQ=255)
                                                     tCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAg                                                                                          <  7:450145/149‑1 (MQ=255)
                                                     gcAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAg                                                                                          <  1:260848/148‑1 (MQ=255)
                                                       aGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAgg                                                                                         <  3:541162/148‑1 (MQ=255)
                                                       aGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGt                                                                                        <  2:15516/149‑1 (MQ=255)
                                                              tgAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCGCGTCCCCCAAAAATCCGTCAGAAGGTGGGTGAGGCTGGATTAGGCGATGGCAAggaggg                                                                                     >  4:146277/1‑141 (MQ=255)
                                                               gAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCGCCCCCCAATATCCTTCAGATGATGAGTGATCCTGGATTAGGGTATGGCAAGGTGGTCAGAt                                                                                >  7:177195/1‑149 (MQ=255)
                                                                   aCCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAAAATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGAattt                                                                             >  1:630165/1‑148 (MQ=255)
                                                                     cAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGa                                                                                 <  1:754385/142‑1 (MQ=255)
                                                                     cAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtcat                                                                          <  1:3926/149‑1 (MQ=255)
                                                                       gTAATCCTTGCGTTCTGTAAGCCTGTTCATGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtcatca                                                                        <  1:293033/149‑1 (MQ=255)
                                                                       gTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtca                                                                           <  5:414535/146‑1 (MQ=255)
                                                                       gTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCGCCTCCCCCAAAAATCCTACAGATGATGAGTGATCCTGCATTAGGGTTTGGCAAGGTGATCAGAttttaa                                                                           >  6:414535/1‑144 (MQ=255)
                                                                          aTCCTTGCGTTCTGTAAGCCGGTTCTGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATcaca                                                                      <  5:193359/148‑1 (MQ=255)
                                                                          aTCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAg                                                                     <  7:395021/149‑1 (MQ=255)
                                                                           tCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGGGCCCGGCGGCGTCCCCCAAAGATCCGTCAGATGTTGAGTGATCGGGCATTTGGCTATGGGAAGGGGAGCAGATTGTGATCACAgg                                                                    >  6:284512/1‑149 (MQ=255)
                                                                             cTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATc                                                                                                                                 <  5:436730/86‑1 (MQ=255)
                                                                             cTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATc                                                                                                                                 >  6:436730/1‑86 (MQ=255)
                                                                             cTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAggg                                                                   <  8:610776/148‑1 (MQ=255)
                                                                              ttGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGtcctcctc                                                                                                                                            <  1:372599/74‑1 (MQ=255)
                                                                              ttGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGtcctcctc                                                                                                                                            >  2:372599/1‑74 (MQ=255)
                                                                                gCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCTCCCCCCAATATCCTTCAGATGATGAGTGATCCTGAATTAGGCTATGGCAAGGTGATCAGATTTTCATAACAGAGGaa                                                                >  4:184317/1‑148 (MQ=255)
                                                                                  gTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCTCCCCCAAAAATACTTCAGATGATGAGTGCTACAGCATTAGGGTATGGCAAGGTGATCAGATTTTCATCAAAGGGGATTTa                                                             >  8:674523/1‑149 (MQ=255)
                                                                                   ttCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGATATTCCTCAAGTTATCAGCCACCGACCACCGCCCCCAAATAAACAACAGCTCAGGAGAGTGACTGCAGAAGGCAATGGCAAGATGATCAGATTTTCTTAACAACGGAAtaaa                                                            >  8:630014/1‑146 (MQ=255)
                                                                                        tAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTGCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGAGGAGTGATCCTGCATTATGCTATTGCAAGGTGATCAGATATTCATCACAGGGGAATTatga                                                          <  2:562251/146‑1 (MQ=255)
                                                                                        tAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTatgat                                                         <  5:723270/147‑1 (MQ=255)
                                                                                          aGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGGCCGGCCGCCGCCCCCACAAAACCGTCAGATGATGAGTGATGCGGCAGTAGGCTATGGGAAGGTGATCAGATTTTCGTAACAGGGGATTTATGATGtt                                                      >  2:62915/1‑148 (MQ=255)
                                                                                           gCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGGCCCCGGCCGCCGGCCCCAAATATCCTTCAGATGATGAGTGATACTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTTTGATGTTa                                                     >  2:767777/1‑148 (MQ=255)
                                                                                            ccGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTaaa                                                   <  7:527757/149‑1 (MQ=255)
                                                                                                  cAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtca                                                                           <  1:762811/119‑1 (MQ=255)
                                                                                                    ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATc                                                                                                              <  5:683992/82‑1 (MQ=255)
                                                                                                    ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGt                                                                                        <  3:504057/104‑1 (MQ=255)
                                                                                                    ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGc                                           <  1:62915/149‑1 (MQ=255)
                                                                                                    ggaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGGCCTCCGCCCCCAAAAATCCTTAAGATGATGAGTGATCCTGCATTAGGGTAAGGCAAGGt                                                                                        >  4:504057/1‑104 (MQ=255)
                                                                                                    ggaggaAATCCTGATCCGGCTATTCCGAAAGGTCTCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCCTTAGGCTATGGCAAGGTTAGCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGc                                           <  4:28482/149‑1 (MQ=255)
                                                                                                     gaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCGCCCGGCCGGCGCCGGCCAATAACCTTAAGATGATGTGTGCGCCTGCATATGGGTATGGCTAGGTGTGAGGATAGTGATCTCAGGGTAATTATCATGTATAATGAAttgaa                                          >  8:173804/1‑145 (MQ=255)
                                                                                                     gaggaAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCGCGGCCGCCACCCCCCAAAAAACTAAAGAAGATGATAGATCCTGAATTAGGCTATGGCAAGGTGAGAAGATTTTAATCACAGGGGAAAGATGATGTTAaatgaatgt                                            >  6:652614/1‑146 (MQ=255)
                                                                                                          aaTCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGc                                     <  7:681200/149‑1 (MQ=255)
                                                                                                           aTCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTa                                                                                                      <  3:401049/83‑1 (MQ=255)
                                                                                                            tCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTa                                                             <  1:242933/123‑1 (MQ=255)
                                                                                                            tCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCAAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTa                                                             >  2:242933/1‑123 (MQ=255)
                                                                                                             ccTGATCCGGCTATTCCGAGAGTTATCCGCCCCCGGCCACCGCCCCCAAATATCCTTCAGATGATGGGTGATCCGGCCTTAGGCGATGGGAAGGGGTTCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCgg                                  >  2:305753/1‑149 (MQ=255)
                                                                                                              cTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAAt                                                               <  1:98687/119‑1 (MQ=255)
                                                                                                                 aTCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGcc                              <  4:471796/149‑1 (MQ=255)
                                                                                                                    cGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCGGCAGGTGccat                            <  5:284512/148‑3 (MQ=255)
                                                                                                                     ggCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTa                                                                                                 <  5:207146/78‑1 (MQ=255)
                                                                                                                      gCTATTCCGAAAGTTATCCGCCCCCGGCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAt                         <  4:39068/149‑1 (MQ=255)
                                                                                                                       cTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAtt                        <  1:98356/149‑1 (MQ=255)
                                                                                                                        tATTCCGAAAGTTATCAGCGCCCGGCCGCCTCCCCCAAATATCCTTGTGATTATGATTGGTCCTGAATTAGGATATGGAAGGGTGATAAGATTTTAATAAAAGGGTAATTATGATGTTAAATGAATGGACCCAGACGCGGCCCCCAatt                       >  6:14727/1‑149 (MQ=255)
                                                                                                                          ttCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAttt                       <  1:393941/147‑1 (MQ=255)
                                                                                                                            ccGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATTATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGtt                    <  5:652614/148‑1 (MQ=255)
                                                                                                                             cGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGCTCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCAttt                       <  5:589346/144‑1 (MQ=255)
                                                                                                                             cGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTa                   <  2:122073/148‑1 (MQ=255)
                                                                                                                             cGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAAAAAAATTCAGATGATGAGTGATACTGCATTATGCTTAGGCAAGGTGATCAGATTTTAATCACAGGGGAATTATTATGTTTAATTCATGGGACCTGCCGGTGCCCCCCTTTGttt                   >  1:528632/1‑147 (MQ=255)
                                                                                                                             cGAAAGTTATCCGCCCCCGTCCTCCACCCCCAAATAAACTTCAGATGAAGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTAATGACAGGGGAATTATGATGTTTAATTAATGGCACCTGCCGGTGCCCCCATATGTTa                   >  8:390658/1‑148 (MQ=255)
                                                                                                                             cGAAAGTTATCCGCCCCCGTCCGCCGCCCCCAAAAAACCAACAGATGATGAGTGATAATGAATTAGGCTATGGCAAGGGTATAAGATTTTAATAAAAGGGGAATTATGATTTTAAATGAATGGAACATGCCGGTGCCCCCAATTGTTa                   >  8:113249/1‑148 (MQ=255)
                                                                                                                              gAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTtcatca                                                                        <  1:16106/94‑1 (MQ=255)
                                                                                                                              gAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTaaa                 <  8:177195/149‑1 (MQ=255)
                                                                                                                                 aGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaa              <  6:206057/149‑1 (MQ=255)
                                                                                                                                   ttATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaag            <  2:183827/149‑1 (MQ=255)
                                                                                                                                         gCCCCCGTCCTCCTCCCCCAAATATACTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATAAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAAcaaagcaaag       >  4:296612/1‑148 (MQ=255)
                                                                                                                                         gCCCCCGTCCTCCACCCCCCAATATCCTTCAGGTGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTATAAGCATGGCACCAGCCGGTGCCCCCATTTGTTAAAcaaagcaaag       >  6:550827/1‑148 (MQ=255)
                                                                                                                                           ccccGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGAt     >  8:271472/1‑148 (MQ=255)
                                                                                                                                            cccGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCg                                   >  1:591403/1‑117 (MQ=255)
                                                                                                                                            cccGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCg                                   <  2:591403/117‑1 (MQ=255)
                                                                                                                                             ccGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTTTGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCaa  >  4:262015/1‑149 (MQ=255)
                                                                                                                                             ccGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCaa  >  8:55163/1‑149 (MQ=255)
                                                                                                                                              cGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTaaa                                                   >  5:359584/1‑99 (MQ=255)
                                                                                                                                              cGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTaaa                                                   <  6:359584/99‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                 
GCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAATCCTTGCGTTCTGTAAGCCGGTTCAGGAGGAAATCCTGATCCGGCTATTCCGAAAGTTATCCGCCCCCGTCCTCCTCCCCCAAATATCCTTCAGATGATGAGTGATCCTGCATTAGGCTATGGCAAGGTGATCAGATTTTCATCACAGGGGAATTATGATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAA  >  NC_000913/422285‑422574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑