New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4599652 =	49 (1.330)	5 (0.140)	5/228	3.2	10.1%	intergenic (‑211/+43)	opgB/yjjA	OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein
	?	NC_000913	4599685 =	43 (1.240)					intergenic (‑244/+10)	opgB/yjjA	OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCAATTCTAGTGTCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGTTATCCAGATT  >  NC_000913/4599524‑4599790                                                                                                                                  |                                                                                                                                            tgcAATTCTAGTGTCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAg                                                                                                                         >  7:31240/1‑149 (MQ=255)   cAATTCTAGTGTCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACA‑GGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCt                                                                                                                       <  5:31815/148‑1 (MQ=255)              tCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGt                                                                                                                                       >  5:142612/1‑122 (MQ=255)              tCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGt                                                                                                                                       <  6:142612/122‑1 (MQ=255)              tCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACgcggc                                                                                                             <  8:31240/148‑1 (MQ=255)                 aaaaaaTGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGttt                                                                                                         >  4:47919/1‑149 (MQ=255)                         cGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTc                                                                                                 <  6:90332/149‑1 (MQ=255)                                gttAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGaaa                                                                                           <  6:129268/148‑1 (MQ=255)                                 ttAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAAt                                                                                          >  4:100064/1‑148 (MQ=255)                                   aGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAg                                                                                               >  3:155645/1‑141 (MQ=255)                                   aGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAg                                                                                               <  4:155645/141‑1 (MQ=255)                                           gTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGt                                                                                                                              <  3:147866/102‑1 (MQ=255)                                           gTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGt                                                                                                                              >  4:147866/1‑102 (MQ=255)                                               ataAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTg                                                                          >  4:80573/1‑149 (MQ=255)                                                 aaaCAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCGCTGtt                                                                        >  3:31258/1‑149 (MQ=255)                                                 aaaCAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGtt                                                                        >  1:77212/1‑149 (MQ=255)                                                  aaCAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGttt                                                                       <  3:47919/149‑1 (MQ=255)                                                    cAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGc                                                                                                                        >  6:96448/1‑99 (MQ=255)                                                    cAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGc                                                                                                                        <  5:96448/99‑1 (MQ=255)                                                      gACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAac                                                                   <  4:31258/149‑1 (MQ=255)                                                          tttttGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCG‑ACAGGAGCCGGGAAAAGGGGATGGAGAGGCCCGCTGAAGCGGGGAAAAGGGAAAACCGCGG‑GTTTGGGCGTTGAGGGAATTAAGTTACGGCCCGTGtttagaaacg                                                                >  6:56285/1‑141 (MQ=255)                                                                aTTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTACCAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCg                                                          >  8:137236/1‑148 (MQ=255)                                                                     ggTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCt                                                    >  5:98548/1‑149 (MQ=255)                                                                       tCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCttt                                                  >  3:158494/1‑149 (MQ=255)                                                                        cACTTCCCGTGTAACA‑GGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGccc                                                                             <  4:132303/120‑1 (MQ=255)                                                                        cACTTCCCGTGTAACA‑GGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGccc                                                                             >  3:132303/1‑120 (MQ=255)                                                                         aCTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGttt                                                                       >  5:98219/1‑126 (MQ=255)                                                                         aCTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGttt                                                                       <  6:98219/126‑1 (MQ=255)                                                                              ccGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCggg                                                                                                                               <  8:143328/66‑1 (MQ=255)                                                                              ccGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCggg                                                                                                                               >  7:143328/1‑66 (MQ=255)                                                                                 tgtAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAAcgcg                                                                                                               >  1:49205/1‑79 (MQ=255)                                                                                 tgtAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAAcgcg                                                                                                               <  2:49205/79‑1 (MQ=255)                                                                                  gtAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCt                                       >  1:22205/1‑149 (MQ=255)                                                                                         gggTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGc                                <  3:80573/149‑1 (MQ=255)                                                                                         gggTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGc                                >  8:27351/1‑149 (MQ=255)                                                                                          ggTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGcc                               <  4:158494/149‑1 (MQ=255)                                                                                                aCCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGa                         <  2:77212/149‑1 (MQ=255)                                                                                                 ccGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAg                        <  2:22205/149‑1 (MQ=255)                                                                                                      cAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAgg                                                                                              <  2:48362/75‑1 (MQ=255)                                                                                                      cAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAgg                                                                                              >  1:48362/1‑75 (MQ=255)                                                                                                          aGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGa               <  7:27351/149‑1 (MQ=255)                                                                                                           gCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGAt              <  7:137236/149‑1 (MQ=255)                                                                                                              gggAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGtt           <  6:98548/149‑1 (MQ=255)                                                                                                                    aGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAACACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTGGTTCCGATGTTATc        >  7:120458/1‑146 (MQ=255)                                                                                                                       gCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGc                            >  3:27223/1‑123 (MQ=255)                                                                                                                       gCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGc                            <  4:27223/123‑1 (MQ=255)                                                                                                                       gCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGTTATCCAGAtt  >  2:109661/1‑149 (MQ=255)                                                                                                                        cA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGTTATCCAGAtt  >  3:108506/1‑148 (MQ=255)                                                                                                                         a‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGTTATCCAGAtt  >  7:18301/1‑147 (MQ=255)                                                                                                                                  |                                                                                                                                            TGCAATTCTAGTGTCAAAAAAATGCGATGTTGTTAGGAATTAGTTTATAAACAGACTTTTTTGATTACGGTCACTTCCCGTGTAACAGGGGTAAAACCGTCCAGGAGCAGGGAAAAGGGCA‑GGAGAGAGCCGCGTCAGCCGGGTAACAGCTAAAACGCGGCGTTTCGCGGTTCAGGAAATGAAGTT‑CAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGTTATCCAGATT  >  NC_000913/4599524‑4599790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.