| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2231929 = | 91 (1.090) | 4 (0.050) | 4/248 | NT | 4.5% | coding (86/885 nt) | cdd | cytidine/deoxycytidine deaminase |
| ? | NC_000913 | 2231951 = | 83 (1.050) | coding (108/885 nt) | cdd | cytidine/deoxycytidine deaminase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGCGCGCAATTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2232079‑2231929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggaGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTG > NC_000913/2231951‑2232094 CCGCGCGCAATTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGGG < 7:76150/149‑1 CGCGCGCAATTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGGG > 5:345938/1‑148 GCGCGCAATTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGCTGAGACTTGCTCCCCGGGCAACAAAGCGGGG > 1:274918/1‑148 TTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGG < 1:318560/138‑1 TTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGG > 2:318560/1‑138 AACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGTAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGG < 5:348984/131‑1 AACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGGAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGG > 6:348984/1‑131 AATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCG > 5:369812/1‑72 AATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCG < 6:369812/72‑1 TGCTCCCCGGTCAACAAAGCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACG > 1:172157/1‑63 TGCTCCCCGGTCAACAAAGCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACG < 2:172157/63‑1 CCCGGTCAACAAAGCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGC < 7:7674/67‑1 CCCGGTCAACAAAGCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGC > 8:7674/1‑67 CGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCT > 4:248776/1‑149 GGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTG < 5:271069/149‑1 GGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTG < 6:79980/149‑1 GGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTG < 8:30765/149‑1 GGGGAGCAAGTCTCATAGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGCGCGGAACCTG > 2:75730/1‑149 CCGCGCGCAATTGCGCCAACATTAAAATTCGACAATGGCGTACGCGCACAGGCCGCCGCCAGCGGAAGTAGTGCGAATGCCAGCGCGTCTTCGTCCAGCCCCGTTGCGCTCTTCAGCGATGAGACTTGCTCCCCGGTCAACAAAGCGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2232079‑2231929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggaGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTG > NC_000913/2231951‑2232094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |