New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3496884 =	74 (0.890)	3 (0.040)	3/256	NT	3.8%	intergenic (+7/‑119)	nirD/nirC	nitrite reductase (NADH) small subunit/nitrite transporter
	?	NC_000913	3496909 =	80 (0.980)					intergenic (+32/‑94)	nirD/nirC	nitrite reductase (NADH) small subunit/nitrite transporter
Rejected: Frequency below/above cutoff threshold.

CAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTG  >  NC_000913/3496737‑3497030                                                                                                                                                    |                                                                                                                                                   cAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTaa                                                                                                                                                   <  8:133971/149‑1 (MQ=255) cAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTaa                                                                                                                                                   >  7:85311/1‑149 (MQ=255)  aGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAAc                                                                                                                                                  <  2:44014/149‑1 (MQ=255)     caatgcgcgcagcgttagccgcacacttattaatagtgtctgtaaacatttgattatcctttaaaaaataaaaacaaaaaataaaacaaaaagtttaaaaaatgtcctgcaatataccgaagattattacaggaccatgcaaaAACgg                                                                                                                                                <  1:262241‑M1/5‑1 (MQ=255)       gAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGCACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAg                                                                                                                                             <  3:255822/149‑1 (MQ=255)             tgGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCaa                                                                                                                                       <  1:363486/149‑1 (MQ=255)                gTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGc                                                                                                                                    >  2:172192/1‑149 (MQ=255)                gTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGc                                                                                                                                    >  2:385345/1‑149 (MQ=255)                gTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAACGTTTTAACGGGAGGCGCAATGc                                                                                                                                    <  2:76579/149‑1 (MQ=255)                          cGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAAc                                                                                                                                                  >  8:177272/1‑125 (MQ=255)                          cGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAAc                                                                                                                                                  <  7:177272/125‑1 (MQ=255)                           gCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCttttt                                                                                                                         >  5:258479/1‑149 (MQ=255)                           gCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCttttt                                                                                                                         <  3:328930/149‑1 (MQ=255)                                   aaCAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTc                                                                                                                 <  8:85311/149‑1 (MQ=255)                                        cGTTTTCGCTTAAGCGCCGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGt                                                                                                             >  4:222179/1‑148 (MQ=255)                                        cGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGta                                                                                                            <  1:172191/149‑1 (MQ=255)                                         gTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGtaa                                                                                                           <  1:63013/149‑1 (MQ=255)                                                   aaGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTc                                                                                                   <  3:237095/147‑1 (MQ=255)                                                     gcgcCGGCTTGTGCAGGGAAGACGGACAGGTTTCGGTCAAACATTGCGAAGCGCGAGTGAAAGACGGCGTGGTGCGGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAGTGCCGCCGCGTTGTGCATGGTCCTGGAATTATGTTCGGta                                                                                               >  4:259684/1‑149 (MQ=255)                                                     gCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGa                                                                                                                                              <  1:238431/102‑1 (MQ=255)                                                     gCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGa                                                                                                                                              >  2:238431/1‑102 (MQ=255)                                                       gACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGTGCGTGTAATAAAGTGCGGtaaa                                                                                             >  7:67711/1‑147 (MQ=255)                                                         cGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCATCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATAtt                                                                                           <  1:386953/149‑1 (MQ=255)                                                            cTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCa                                                                                        <  3:199781/149‑1 (MQ=255)                                                             ttttgCATGGAAGACGAACAGTTTTCCTTCAAACATTACGAATCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACTGGAGTCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAg                                                                                       <  8:131997/146‑1 (MQ=255)                                                             ttGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAg                                                                                       >  7:131997/1‑149 (MQ=255)                                                             ttGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAg                                                                                       >  5:295134/1‑149 (MQ=255)                                                              tgtgCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAg                                                                                       >  7:381530/1‑148 (MQ=255)                                                                  cATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACAt                                                                                  >  7:69751/1‑149 (MQ=255)                                                                   aTGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACAtt                                                                                 >  8:180577/1‑149 (MQ=255)                                                                      gAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACAttttt                                                                              >  6:131953/1‑149 (MQ=255)                                                                      gAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACAttttt                                                                              >  5:60576/1‑149 (MQ=255)                                                                         gACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTaa                                                                           <  6:258479/149‑1 (MQ=255)                                                                           cGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAAc                                                                         <  6:295134/149‑1 (MQ=255)                                                                           aaaacaaaaaataaaacaaaaagtttaaaaaatgtcctgcaatataccgaagattattacaggaccatgcaaaAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTaaa                                                                          >  2:262241‑M1/74‑148 (MQ=255)                                                                             aaCAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGtaataa                                                                                                        <  6:144316/116‑1 (MQ=255)                                                                             aaCAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGtaataa                                                                                                        >  5:144316/1‑116 (MQ=255)                                                                              aCAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACttt                                                                      >  4:76910/1‑149 (MQ=255)                                                                               cAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACtttt                                                                     >  4:294341/1‑149 (MQ=255)                                                                                 gTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTg                                                                   <  6:83781/149‑1 (MQ=255)                                                                                       cGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTa                                                              <  3:222179/148‑1 (MQ=255)                                                                                       cGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAt                                                             <  4:143992/149‑1 (MQ=255)                                                                                         tCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAttt                                                           >  5:309511/1‑149 (MQ=255)                                                                                           aaaCATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAttttt                                                         >  5:61228/1‑149 (MQ=255)                                                                                           aaaCATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGATAATGTTTTAACGGGATGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGGTTTAttttt                                                         >  3:34348/1‑149 (MQ=255)                                                                                            aaaaagtttaaaaaatgtcctgcaatataccgaagattattacaggaccatgcaaaAACGGGAGGCGCAATGCCTCCCCTTTTTGCa                                                                                                                      <  6:98040‑M1/31‑1 (MQ=255)                                                                                            aaaaagtttaaaaaatgtcctgcaatataccgaagattattacaggaccatgcaaaAACGGGAGGCGCAATGCCTCCCCTTTTTGCa                                                                                                                      >  5:98040‑M1/57‑87 (MQ=255)                                                                                            aaCATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAtttttt                                                        >  3:141761/1‑149 (MQ=255)                                                                                             aCATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTg                                                       >  4:210319/1‑149 (MQ=255)                                                                                             aCATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTg                                                       >  4:278799/1‑149 (MQ=255)                                                                                               aTTACGAAGCTCGAGTGAAAGACGGCGTGGTTCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGtt                                                     <  7:168503/149‑1 (MQ=255)                                                                                               aTTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGtt                                                     >  7:339627/1‑149 (MQ=255)                                                                                               aTTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGtt                                                     >  4:113669/1‑149 (MQ=255)                                                                                               aTTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGtt                                                     >  5:340848/1‑149 (MQ=255)                                                                                                ttACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGttt                                                    <  8:381530/149‑1 (MQ=255)                                                                                                    gAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTGTATGCATGGTCCTGTAATAATCTTCGGTATTTTGCAGGACATTTATTAAACTATTTGTTTTATTTTTTGTTTTTAt                                                >  8:388210/1‑149 (MQ=255)                                                                                                           gAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCGTGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTa                                          >  1:183902/1‑148 (MQ=255)                                                                                                           gAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATGTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTa                                          >  6:135407/1‑148 (MQ=255)                                                                                                            ctttaaaGTCGGGGTGGTGGAGCATGGCGGTTAATTTTTTAAAGGGATGCGCCATGCCTCCCCTTTTTTCATTGTGCTTTAATTATCTTCGGTATATTTCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTaaa                                        <  1:172192/145‑1 (MQ=255)                                                                                                            aGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTaaa                                        <  1:385345/149‑1 (MQ=255)                                                                                                            aGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTaaa                                        <  8:69751/149‑1 (MQ=255)                                                                                                              tGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAg                                       >  3:253678/1‑148 (MQ=255)                                                                                                               gAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGa                                     >  1:318350/1‑149 (MQ=255)                                                                                                                 aaGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGAt                                    >  4:167811/1‑148 (MQ=255)                                                                                                                 aaGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGAt                                    <  6:340848/148‑1 (MQ=255)                                                                                                                       gCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCaaa                             <  3:287900/149‑1 (MQ=255)                                                                                                                        cGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAtttt                                                          >  1:8480/1‑119 (MQ=255)                                                                                                                        cGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTAtttt                                                          <  2:8480/119‑1 (MQ=255)                                                                                                                         gtggtgCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTaaa                                        <  3:25330/136‑1 (MQ=255)                                                                                                                         gtggtgCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTaaa                                        >  4:25330/1‑136 (MQ=255)                                                                                                                                aGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAg                    <  6:60576/149‑1 (MQ=255)                                                                                                                                 gCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGa                   <  5:131953/149‑1 (MQ=255)                                                                                                                                   tGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGaca                 >  7:357026/1‑149 (MQ=255)                                                                                                                                      gcgGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTa              <  4:253678/149‑1 (MQ=255)                                                                                                                                         gTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTTCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATta           <  3:259684/149‑1 (MQ=255)                                                                                                                                         gTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATta           <  3:76910/149‑1 (MQ=255)                                                                                                                                          ttAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaa          >  1:132450/1‑149 (MQ=255)                                                                                                                                          ttAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaa          <  3:278799/149‑1 (MQ=255)                                                                                                                                            aaTGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaat         <  4:235373/148‑1 (MQ=255)                                                                                                                                             aTGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaataa       <  8:357026/149‑1 (MQ=255)                                                                                                                                             aTGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaataa       <  2:132450/149‑1 (MQ=255)                                                                                                                                             aTGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaata        <  3:210319/148‑1 (MQ=255)                                                                                                                                             aTGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGGCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATtaataa       <  7:388210/149‑1 (MQ=255)                                                                                                                                               gTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACa                     >  4:288343/1‑133 (MQ=255)                                                                                                                                               gTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACa                     <  3:288343/133‑1 (MQ=255)                                                                                                                                                ttttAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAgtg    >  7:23837/1‑149 (MQ=255)                                                                                                                                                 tttAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAgtgt   >  2:281936/1‑149 (MQ=255)                                                                                                                                                  ttAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAgtgt   <  2:318350/148‑1 (MQ=255)                                                                                                                                                  ttAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGtgtg  >  3:356838/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAATGTTTTAACGGGAGGCGCAATGCCTCCCCTTTTTGCATGGTCCTGTAATAATCTTCGGTATATTGCAGGACATTTTTTAAACTTTTTGTTTTATTTTTTGTTTTTATTTTTTAAAGGATAATCAAATGTTTACAGACACTATTAATAAGTGTG  >  NC_000913/3496737‑3497030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.