New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3740964 =NA (NA)6 (0.080) 4/246 NT NA noncoding (1/98 nt) RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3740989 = NA (NA)noncoding (26/98 nt) RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 125 total aligned reads displayed.

TGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC  >  NC_000913/3740842‑3741137
                                                                                                                                                   |                                                                                                                                                    
tGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGTAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                                                                                     <  2:189559/149‑1 (MQ=255)
 aaacgttttccggcgtttctcaacgccggaacagtgcgctttgtttatgccagatgcggcgtaaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtagGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                                                    >  5:142744‑M1/122‑149 (MQ=255)
        tACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt                                                                                                                                             >  1:294457/1‑149 (MQ=255)
           gCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCAACGCTTATCAGGCCTACATGATTTCt                                                                                                                                          >  1:122031/1‑149 (MQ=255)
           cggcgtttctcaacgccggaacagtgcgctttgtttatgccagatgcggcgtaaacgccttatccggcctacaaattcttccaaattcaatatattgcagaaatcatgtagGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTc                                                                                                                                           >  6:237663‑M1/112‑148 (MQ=255)
             aTCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTg                                                                                                                                         >  1:258122/1‑148 (MQ=255)
             aTCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTg                                                                                                                                         >  2:57394/1‑148 (MQ=255)
             aTCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGc                                                                                                                                        <  7:72074/149‑1 (MQ=255)
                 aTGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAata                                                                                                                                    >  6:289699/1‑149 (MQ=255)
                    tATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAatata                                                                                                                                  <  3:279206/148‑1 (MQ=255)
                      tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATAtt                                                                                                                                >  2:290550/1‑148 (MQ=255)
                        cgcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGaa                                                                                                                             >  5:166219/1‑149 (MQ=255)
                         gcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAAt                                                                                                                            >  3:188153/1‑149 (MQ=255)
                           aTGACCTACGCACCAGCGCCGGCGAAAATTGCGGCGGGGGTGAAGATTCTGGCGGACGAGATAGAAAGAGCCGGGGCTGAAAGTCACTAAAAATTGCCGGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAAttt                                                                                                                          <  6:278993/149‑1 (MQ=37)
                           aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCaa                                                                                                                                      <  4:202111/137‑1 (MQ=255)
                           aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCaa                                                                                                                                      >  3:202111/1‑137 (MQ=255)
                            tGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTg                                                                                                                         <  7:7771/149‑1 (MQ=255)
                               aCTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTgg                                                                                                                        >  5:89629/1‑147 (MQ=255)
                               aCTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGgaa                                                                                                                      <  3:147254/149‑1 (MQ=255)
                               aCTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGgaa                                                                                                                      <  5:37386/149‑1 (MQ=255)
                                 tACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGgaag                                                                                                                     >  5:40742/1‑148 (MQ=255)
                                   cGTACCAGAGCCGGTGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAAt                                                                                                                  <  2:158949/149‑1 (MQ=255)
                                      aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTc                                                                                                                                           <  8:30237/121‑1 (MQ=255)
                                      aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTc                                                                                                                                           >  7:30237/1‑121 (MQ=255)
                                      aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTg                                                                                                               >  6:295497/1‑149 (MQ=255)
                                       ccAGAGCCGGAGAAAATTGATGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCGTGGGCTGAAAGTCACTATAAATTGCCTGTTGCGCTTCGCTTATCAGGCGTACATGATTTCTGCAATATATTGAATTTGGAAGTATTTGt                                                                                                              <  4:151034/149‑1 (MQ=38)
                                       ccAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGt                                                                                                              <  8:314050/149‑1 (MQ=255)
                                        cAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTg                                                                                                               >  3:262634/1‑147 (MQ=255)
                                         agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAg                                                                                                            >  6:112218/1‑149 (MQ=255)
                                            gCCGTAGAAAATTGAGGCGGGGGGGTAGATTCTGGCTGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGcc                                                                                                         <  4:189657/149‑1 (MQ=255)
                                               ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGa                                                                                                      <  2:258122/149‑1 (MQ=255)
                                               ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGa                                                                                                      <  5:227671/149‑1 (MQ=255)
                                                gagaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAAATTGGAAGAATTTGTAGGCCGGa                                                                                                      >  3:225643/1‑148 (MQ=255)
                                                 agaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGa                                                                                                      <  1:57394/147‑1 (MQ=255)
                                                  gaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAAttt                                                                                                                <  8:56791/136‑1 (MQ=255)
                                                  gaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAAttt                                                                                                                >  7:56791/1‑136 (MQ=255)
                                                     aaTTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGc                                                                                                <  4:306535/149‑1 (MQ=255)
                                                       ttGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGt                                                                                              <  6:246980/149‑1 (MQ=255)
                                                          aGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTa                                                                                           <  6:40742/149‑1 (MQ=255)
                                                            gCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTAcg                                                                                         <  3:4645/149‑1 (MQ=255)
                                                             gggtggTGAAGATTCTGGCGGAAGAGATAGAAAGATCCTGTGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGATTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGTATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                                        <  4:74044/145‑1 (MQ=25)
                                                                   tGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                                                  >  8:90409/1‑149 (MQ=255)
                                                                    gAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCt                                                                                 >  3:47176/1‑149 (MQ=255)
                                                                     aaGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTg                                                                                <  7:260655/149‑1 (MQ=255)
                                                                      aGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTgg                                                                               <  5:295497/149‑1 (MQ=255)
                                                                       gATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTgg                                                                               >  2:176756/1‑148 (MQ=255)
                                                                              tcgtaaGAGATAGAAATAGACTGTGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGTAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATaa                                                                          <  5:32243/142‑1 (MQ=21)
                                                                              gCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAAc                                                                        >  1:212078/1‑148 (MQ=255)
                                                                               ctacaaattcttccaaattcaatatattgcagaaatcatgtagGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTg                                                                                                                                         >  8:94890‑M1/44‑82 (MQ=255)
                                                                               ctacaaattcttccaaattcaatatattgcagaaatcatgtagGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTg                                                                                                                                         <  7:94890‑M1/39‑1 (MQ=255)
                                                                                ggAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACa                                                                       >  8:394294/1‑147 (MQ=255)
                                                                                 gAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCgg                                                                                                       >  5:210741/1‑114 (MQ=255)
                                                                                 gAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCgg                                                                                                       <  6:210741/114‑1 (MQ=255)
                                                                                  aaGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATaaa                                                                         <  2:3634/143‑1 (MQ=255)
                                                                                  aaGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAgc                                                                   <  5:47140/149‑1 (MQ=255)
                                                                                  aaGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAgc                                                                   >  6:63974/1‑149 (MQ=255)
                                                                                       aTAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATATGGCATAAACAAAGCGCACt                                                              >  2:116079/1‑149 (MQ=255)
                                                                                          gAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATAtt                                                                                                                                <  6:15856/80‑1 (MQ=255)
                                                                                          gAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATAtt                                                                                                                                >  5:15856/1‑80 (MQ=255)
                                                                                           gcaaattcaatatattgcagagatggcgtagGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                                                                   <  3:333534‑M1/29‑1 (MQ=255)
                                                                                           gcaaattcaatatattgcagagatggcgtagGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                                                                   >  4:333534‑M1/32‑60 (MQ=255)
                                                                                           aaaGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTAcgccgc                                                                                     >  3:152411/1‑122 (MQ=255)
                                                                                           aaaGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTAcgccgc                                                                                     <  4:152411/122‑1 (MQ=255)
                                                                                           aaaGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTc                                                          >  2:220203/1‑149 (MQ=255)
                                                                                           aaaGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTc                                                          >  2:343601/1‑149 (MQ=255)
                                                                                            aaGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTcc                                                         >  4:171656/1‑149 (MQ=255)
                                                                                             agagCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCg                                                        <  5:276463/149‑1 (MQ=255)
                                                                                                    gggCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTga                                                 <  1:375701/149‑1 (MQ=255)
                                                                                                     ggCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTga                                                 <  1:176756/148‑1 (MQ=255)
                                                                                                     ggCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTga                                                 <  2:93708/148‑1 (MQ=255)
                                                                                                          aaaGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAAc                                            <  1:290550/148‑1 (MQ=255)
                                                                                                            cagaaatcatgtaggcctgataagcgtagcgcatcaggcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAg                                                                                                            <  7:94890‑M2/43‑1 (MQ=255)
                                                                                                            aGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGcc                                         <  6:89629/149‑1 (MQ=255)
                                                                                                             gTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCg                                        <  1:220203/149‑1 (MQ=255)
                                                                                                              tCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCgg                                       <  1:343601/149‑1 (MQ=255)
                                                                                                              gaaatcatgtaggcctgataagcgtagcgcatcaggcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCg                                        >  6:237663‑M2/38‑148 (MQ=255)
                                                                                                                 cTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGaa                                     >  7:2713/1‑148 (MQ=255)
                                                                                                                  tAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTTCTCAACGCCGGaa                                     <  2:352017/147‑1 (MQ=255)
                                                                                                                  tAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTTCTCAACGCCGGaa                                     >  1:352017/1‑147 (MQ=255)
                                                                                                                    aaaaTTGCCTGCTGCGCTACGCTTATCAGGCCTACATGAGTTCTGCAAGATATTGAATGTGGAAGAATATGTAGGCCGGAGAAGGCGTTTACGCCGCAGCTGCCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCGGGAAAGCg                                 >  4:24065/1‑149 (MQ=21)
                                                                                                                    aaaaTTGCCTGATGAGCTACGCTTATCAGGCGTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTTAAGGCCGGATAAGTCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGTCGTTGAGATACGCCGGAAAACg                                 >  5:285593/1‑149 (MQ=21)
                                                                                                                      gtaggcctgataagcgtagcgcatcaggcCTACGCCATCTCTGCAATATATTGAATTtgc                                                                                                                        >  4:333534‑M2/30‑59 (MQ=255)
                                                                                                                      gtaggcctgataagcgtagcgcatcaggcCTACGCCATCTCTGCAATATATTGAATTtgc                                                                                                                        <  3:333534‑M2/31‑2 (MQ=255)
                                                                                                                      aaTTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGtt                               >  7:239580/1‑149 (MQ=255)
                                                                                                                       taggcctgataagcgtagcgcatcaggcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGttt                              >  5:142744‑M2/29‑149 (MQ=255)
                                                                                                                       aTTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGttt                              <  7:394294/149‑1 (MQ=255)
                                                                                                                       aTTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGttt                              <  2:294457/149‑1 (MQ=255)
                                                                                                                           CCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGt                                                    <  2:141835‑M1/123‑1 (MQ=255)
                                                                                                                           CCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGt                                                    >  1:141835‑M1/1‑123 (MQ=255)
                                                                                                                             TGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCaaa                          <  1:220674‑M1/147‑1 (MQ=255)
                                                                                                                               ATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAg                       >  2:212078‑M1/1‑148 (MQ=255)
                                                                                                                                 gcgcTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGgct                    >  7:281098/1‑149 (MQ=255)
                                                                                                                                   gcTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGgctgc                  >  4:146427/1‑149 (MQ=255)
                                                                                                                                    cTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGgctgct                 >  4:211038/1‑149 (MQ=255)
                                                                                                                                    cTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGgctgct                 <  3:211038/149‑1 (MQ=255)
                                                                                                                                     tACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGctgctg                >  1:129902/1‑149 (MQ=255)
                                                                                                                                            atcaggcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGc         >  3:281900‑M2/8‑149 (MQ=255)
                                                                                                                                               aggcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGa      >  7:169576‑M2/5‑149 (MQ=255)
                                                                                                                                                 gcCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATg    >  1:85878‑M2/3‑149 (MQ=255)
                                                                                                                                                 gcCTACATGATTTATGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCAGAATCTGGCATAAACAAAGCGAACTGTTACGGCGTTGAGAAACGCAGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATg    >  3:295382‑M2/3‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATTTCTGCAATATATTGAATTTGGAAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCTGGCATAAACAAAGCGCACTGTTCCGGCGTTGAGAAACGCCGGAAAACGTTTCAAACAGGCTGCTGCCGTAGCCGATGCC  >  NC_000913/3740842‑3741137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.