| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,601,632 | A→G | 5.2% | F152S (TTC→TCC) | ftsX ← | putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,601,632 | 0 | A | G | 5.2% | 299.3 / 4.5 | 95 | F152S (TTC→TCC) | ftsX | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (46/44); new base G (3/2); total (49/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
AATGCCGTTAATCTGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGATAATACTGCGT > NC_000913/3601484‑3601780 | aaTGCCGTTAATCTGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGG‑TTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGaa > 5:149142/1‑149 (MQ=255) gTTAATCTGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCAc > 6:89730/1‑149 (MQ=255) tCTGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGt > 6:309948/1‑149 (MQ=255) tGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGc > 5:260670/1‑149 (MQ=255) cGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGc < 8:21003/147‑1 (MQ=255) cGTGATACGATCACGCAGCGTATTCAGTGAATCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGc < 2:79043/147‑1 (MQ=255) tGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCt < 8:268193/149‑1 (MQ=255) gATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCAc > 3:994/1‑147 (MQ=255) gATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACga < 7:120264/149‑1 (MQ=255) gATCACGCAGCGAATTCAGTGATTCCGTCCCCTTGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACga < 5:238581/149‑1 (MQ=255) tCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGGACTCAcc < 6:28657/131‑1 (MQ=255) tCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGGACTCAcc > 5:23286/1‑131 (MQ=255) tCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGGACTCAcc > 5:28657/1‑131 (MQ=255) tCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGGACTCAcc < 6:23286/131‑1 (MQ=255) gCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGc < 6:307643/133‑1 (MQ=255) gCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGc > 5:307643/1‑133 (MQ=255) gCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAg < 6:185148/149‑1 (MQ=255) aTTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCa > 6:103111/1‑149 (MQ=255) ttCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCCGACCAGTTACGCAACTCACCCCGTGCGTCTTCACGAGAACGATAGTTCAc < 8:174912/149‑1 (MQ=255) ttCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCAc < 5:309948/149‑1 (MQ=255) tCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACt > 4:298687/1‑149 (MQ=255) cAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACtt > 8:166810/1‑149 (MQ=255) aGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACttt < 1:15829/149‑1 (MQ=255) aGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGAGCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGACAGATAGATCACttt > 4:193665/1‑149 (MQ=255) gTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTtc < 6:308119/149‑1 (MQ=255) gtttCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCTCTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTtctc < 2:201313/147‑1 (MQ=255) tCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCt > 4:353857/1‑149 (MQ=255) ccTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGc > 8:29839/1‑149 (MQ=255) cTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCt > 5:304926/1‑149 (MQ=255) cTGGAAATCGAGTTTCGGCATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGc > 3:56201/1‑148 (MQ=255) tGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTc > 4:273111/1‑149 (MQ=255) gAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTc < 6:260670/147‑1 (MQ=255) aaaTCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGc < 5:377413/149‑1 (MQ=255) aTCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCt < 7:166810/149‑1 (MQ=255) tCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTg < 8:323325/149‑1 (MQ=255) gTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAAc > 5:198814/1‑149 (MQ=255) gTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAAc > 1:367012/1‑149 (MQ=255) ttCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACtg > 7:7748/1‑149 (MQ=255) tCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCCCGCCTTGCTCGGCCTGCAACtgt > 5:293574/1‑149 (MQ=255) tCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACtgt > 5:4333/1‑149 (MQ=255) cGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACtgt < 5:89730/148‑1 (MQ=255) cGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACtgt < 8:292748/148‑1 (MQ=255) cGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACCTTCTCCACGCCTTGCTCGGCCTGCAACtgt < 5:103111/148‑1 (MQ=255) gATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGcca < 4:994/149‑1 (MQ=255) caccacCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGccacca > 6:214309/1‑149 (MQ=255) ccGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGccc > 2:95012/1‑149 (MQ=255) cGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCg < 6:4333/149‑1 (MQ=255) ccACTGCCGGAAGCGGGTTTTCTTCCCGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCg > 6:178694/1‑147 (MQ=255) cACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTAACGGAACTCACCCAGTGCGTCTACACGAGAAAGATAGTTCACTTACTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCgcag > 3:195691/1‑149 (MQ=255) aCTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGaa < 7:373498/90‑1 (MQ=255) aCTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGaa > 8:373498/1‑90 (MQ=255) aCTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCgcag > 3:31266/1‑148 (MQ=255) cTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCgcagca < 3:353857/149‑1 (MQ=255) tGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGcagcag > 4:184938/1‑149 (MQ=255) cGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGt > 1:216278/1‑149 (MQ=255) ggAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCggc < 6:318058/149‑3 (MQ=255) gAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGAt > 4:289192/1‑87 (MQ=255) gAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGAt < 3:289192/87‑1 (MQ=255) gAAGCGGGTTTTCTTCCAACATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCa > 4:234775/1‑149 (MQ=255) aaGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCt > 4:316460/1‑116 (MQ=255) aaGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCt < 3:316460/116‑1 (MQ=255) cgggtttCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTc < 6:149142/145‑1 (MQ=255) cAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGttttt < 7:29839/148‑1 (MQ=255) aGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATc < 2:372799/134‑1 (MQ=255) aGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATc > 1:372799/1‑134 (MQ=255) gCATATCCAGCGCACCACCAAAACCAGAACAGTTACGGGACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCCCCACGCCCGCAGCAGCGTCATCGTCCAGCGGTTTTTg > 2:136665/1‑148 (MQ=255) cATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCa < 3:334843/149‑1 (MQ=255) cATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCa < 2:367012/149‑1 (MQ=255) cATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCa < 6:304926/149‑1 (MQ=255) tCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGc < 3:303290/135‑1 (MQ=255) tCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGc > 4:303290/1‑135 (MQ=255) aGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATaaa > 4:353637/1‑148 (MQ=255) gcgcACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATaaa > 2:112370/1‑147 (MQ=255) gcgcACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATaaa > 2:96229/1‑147 (MQ=255) gcgcACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACa < 4:56201/149‑1 (MQ=255) gcgcACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACa < 1:96229/149‑1 (MQ=255) caccacCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGt > 3:220416/1‑148 (MQ=255) cccaccaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGGCATCGTCCAGCGTTTTTTGCAGATATACAGt < 5:327725/146‑1 (MQ=255) accaccAAAACCAGACCAGTTACGGACCTCACCCAGTGCGTATTCACGAGAAAGCTAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTCCCACCACGCCCGCAGCAGCGTCATCGTCCCGCGTTTTTTGCAGCTAACCAgg > 6:327725/1‑146 (MQ=255) caccaAAACCAGCCCAGGTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGAtt > 1:231876/1‑149 (MQ=255) caccaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACa < 2:265577/143‑1 (MQ=255) caccaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACa > 1:265577/1‑143 (MQ=255) caccaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGAtt > 1:68916/1‑149 (MQ=255) accaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGAttt < 8:7748/149‑1 (MQ=255) ccaAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTg > 5:245091/1‑149 (MQ=255) aaaaCCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCg < 5:35716/149‑1 (MQ=255) cagaccagTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGAc > 6:347750/1‑149 (MQ=255) gaccagTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTg < 7:358345/122‑1 (MQ=255) gaccagTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTg > 8:358345/1‑122 (MQ=255) accagTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGa < 4:31266/149‑1 (MQ=255) accagTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGa < 3:273111/149‑1 (MQ=255) agTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGataa < 3:184938/149‑1 (MQ=255) gTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGataat < 3:140529/149‑1 (MQ=255) ttACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGataata > 4:77111/1‑149 (MQ=255) ttACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGataat > 5:147532/1‑148 (MQ=255) ttACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCG‑CCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGATAATAc > 2:261619/1‑149 (MQ=255) aaCTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCaa > 2:254803/1‑65 (MQ=255) aaCTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCaa < 1:254803/65‑1 (MQ=255) aaCTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGATAATACTGCGt > 3:77506/1‑149 (MQ=255) | AATGCCGTTAATCTGCGTGATACGATCACGCAGCGTATTCAGTGATTCCGTCCCCTGGAAATCGAGTTTCGGGATCACCACCGCCACTGCCGGAAGCGGGTTTTCTTCCAGCATATCCAGCGCACCACCAAAACCAGACCAGTTACGGAACTCACCCAGTGCGTCTTCACGAGAAAGATAGTTCACTTTCTCCACGCCTTGCTCGGCCTGCAACTGTGCCACCACGCCCGCAGCAGCGTCATCGTCCAGCGTTTTTTGCAGATAAACAGTGATTTGCGGTGACGGATAATACTGCGT > NC_000913/3601484‑3601780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |