New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3769048 =103 (1.060)4 (0.040) 4/256 11.5 3.6% pseudogene (74/282 nt) yibW pseudogene, rhsA‑linked
?NC_000913 3769075 = 114 (1.240)pseudogene (101/282 nt) yibW pseudogene, rhsA‑linked
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 125 total aligned reads displayed.

TTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCA  >  NC_000913/3768927‑3769223
                                                                                                                                                    |                                                                                                                                                    
ttCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGTCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATTACACGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGt                                                                                                                                                      >  1:151731/1‑149 (MQ=255)
     gTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTa                                                                                                                                                    <  5:190386/146‑1 (MQ=255)
     gTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATa                                                                                                                                                 >  2:325131/1‑149 (MQ=255)
         taataTGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAg                                                                                                                                              >  1:209297/1‑148 (MQ=255)
           atatGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGaa                                                                                                                                           <  5:258193/149‑1 (MQ=255)
            tatGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTa                                                                                                                                                    <  4:387962/139‑1 (MQ=255)
            tatGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTa                                                                                                                                                    >  3:387962/1‑139 (MQ=255)
            tatGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAAc                                                                                                                                          <  1:86309/149‑1 (MQ=255)
                cAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTtat                                                                                                                                      <  2:209297/149‑1 (MQ=255)
                 aaTGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTtat                                                                                                                                      >  8:222291/1‑148 (MQ=255)
                   tGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAAt                                                                                                                                   >  6:164389/1‑149 (MQ=255)
                    gTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATc                                                                                                                                  >  1:3709/1‑149 (MQ=255)
                       aaaaTAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGc                                                                                                                                >  3:303901/1‑148 (MQ=255)
                                cccGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGAtttt                                                                                                                      >  7:252743/1‑149 (MQ=255)
                                cccGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGAtttt                                                                                                                      >  2:181870/1‑149 (MQ=255)
                                cccGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGAtttt                                                                                                                      >  2:175883/1‑149 (MQ=255)
                                cccGTTGTACACATTTAAAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGAttt                                                                                                                       <  8:428726/148‑1 (MQ=255)
                                 ccGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTc                                                                                                                     <  3:296973/149‑1 (MQ=255)
                                 ccGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTc                                                                                                                     <  2:3709/149‑1 (MQ=255)
                                  cGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTc                                                                                                                     >  5:374410/1‑148 (MQ=255)
                                       tACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACa                                                                                                               >  8:442970/1‑149 (MQ=255)
                                                  aaaTAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTa                                                                                                     >  1:49656/1‑148 (MQ=255)
                                                      aGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCaa                                                                                                                   <  6:271597/130‑1 (MQ=255)
                                                      aGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCaa                                                                                                                   >  5:271597/1‑130 (MQ=255)
                                                        aTGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCtt                                                                                              >  1:162057/1‑149 (MQ=255)
                                                         tGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCttt                                                                                             <  2:49656/149‑1 (MQ=255)
                                                                tACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTaaa                                                                                                   >  2:235749/1‑136 (MQ=255)
                                                                tACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTaaa                                                                                                   <  1:235749/136‑1 (MQ=255)
                                                                tACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCg                                                                                      >  3:180551/1‑149 (MQ=255)
                                                                    tCAAGGCATAAGGAGATGAAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATAAGAATAGTACCGTCAGTTAATACAGGAACTTATACTCGCAATGGATATTAAATACATAGTTGTTTAAAAGCTTTTGGTCAGTGtt                                                                                  >  6:402175/1‑149 (MQ=255)
                                                                      aaGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGTCATACGATTAGTACCGTCAGTCAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTa                                                                                <  8:161438/149‑1 (MQ=255)
                                                                        ggCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               >  7:281949/1‑148 (MQ=255)
                                                                            tATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGAAATGGATTTTCAATACATAGTTGTTTAAACTCTTTTGGTACGTCTTTATGACCt                                                                          >  5:325503/1‑149 (MQ=255)
                                                                              tGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               >  8:438121/1‑142 (MQ=255)
                                                                                 aGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGAtt                                                                     >  1:19624/1‑149 (MQ=255)
                                                                                   ttGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCTTCAGTTAATACAGTAACTTATAATCGCAATGGATTTTCAATAAATATTTGTTTAACCGATTTTGGTCCTTCTTTACGACCTCGATTCt                                                                   >  2:274252/1‑149 (MQ=255)
                                                                                       aaTGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               >  2:275746/1‑133 (MQ=255)
                                                                                       aaTGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               <  1:275746/133‑1 (MQ=255)
                                                                                           ttAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGa                                                            <  2:162057/148‑1 (MQ=255)
                                                                                           ttAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAg                                                           <  7:442970/149‑1 (MQ=255)
                                                                                           ttAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAg                                                           >  8:230381/1‑149 (MQ=255)
                                                                                           ttAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAg                                                           >  4:278908/1‑149 (MQ=255)
                                                                                            tAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAgg                                                          >  4:174955/1‑149 (MQ=255)
                                                                                               tGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGtt                                                       <  5:164389/149‑1 (MQ=255)
                                                                                                gACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTg                                                      >  7:160601/1‑149 (MQ=255)
                                                                                                  cccGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGCAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCt                                                                   <  7:79857/134‑1 (MQ=255)
                                                                                                    cGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGtat                                                   >  4:18036/1‑148 (MQ=255)
                                                                                                     gggAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGTAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATaa                                                 <  2:151731/149‑1 (MQ=255)
                                                                                                     gggAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATaa                                                 <  4:303901/149‑1 (MQ=255)
                                                                                                         gcaagcaaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTgg                                             <  3:278908/149‑1 (MQ=255)
                                                                                                           aagcaaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGtt                                           >  1:81209/1‑149 (MQ=255)
                                                                                                            agcaaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGtt                                           >  5:388740/1‑148 (MQ=255)
                                                                                                             gcaaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGAtt                                                                     >  1:281691/1‑121 (MQ=255)
                                                                                                              caaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTAt                                        <  3:174955/149‑1 (MQ=255)
                                                                                                              caaTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTAt                                        <  3:31638/149‑1 (MQ=255)
                                                                                                                aTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTg                                                                  <  5:253504/121‑1 (MQ=255)
                                                                                                                aTAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTATGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATc                                       >  7:28705/1‑148 (MQ=255)
                                                                                                                 tAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCt                                      >  4:247261/1‑148 (MQ=255)
                                                                                                                 tAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCt                                      >  7:42200/1‑148 (MQ=255)
                                                                                                                   taaaaCCTGACGGAATACGATTAGTAACGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAAt                                   <  6:325503/148‑1 (MQ=255)
                                                                                                                   gAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCttt                                                                                             <  5:17221/91‑1 (MQ=255)
                                                                                                                   gAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCttt                                                                                             >  6:17221/1‑91 (MQ=255)
                                                                                                                   gAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAAt                                   <  4:180551/149‑1 (MQ=255)
                                                                                                                    aaaaCCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               >  8:237712/1‑104 (MQ=255)
                                                                                                                    aaaaCCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAg                                                                               <  7:237712/104‑1 (MQ=255)
                                                                                                                     aaaCCTGACGGCATACTATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGa                                 <  4:139532/149‑1 (MQ=255)
                                                                                                                      aaCCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGAc                                <  7:87897/149‑1 (MQ=255)
                                                                                                                        ccTGACGGCATAGGATTAGTAACGTCATTTAATACAGTAACTTATAATCTCAATGGATTTTCAATACATATTTTTTTAATAGGTTTTGGTCGTTCTTTAGTACATCGATTCTTTTCCGATGTTTGTATAACTGGTTTATCTAATGACAt                              <  8:28705/149‑1 (MQ=255)
                                                                                                                        ccTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACAt                              <  1:181870/149‑1 (MQ=255)
                                                                                                                         cTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCATTACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATg                             >  6:334323/1‑149 (MQ=255)
                                                                                                                          tGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAGACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATg                             >  5:265040/1‑148 (MQ=255)
                                                                                                                          tGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATg                             >  1:174861/1‑148 (MQ=255)
                                                                                                                          tGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATg                             >  7:1229/1‑148 (MQ=255)
                                                                                                                             cGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAAGGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGCCCTCGAGTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCaa                          >  1:261623/1‑148 (MQ=255)
                                                                                                                              ggCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGa                                 >  2:287182/1‑140 (MQ=255)
                                                                                                                              ggCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGa                                 <  1:287182/140‑1 (MQ=255)
                                                                                                                                 aTACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAt                      >  5:114079/1‑148 (MQ=255)
                                                                                                                                  tACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGAttt                                                                                                                       >  2:437864/1‑50 (MQ=255)
                                                                                                                                  tACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAtt                     >  1:137683/1‑148 (MQ=255)
                                                                                                                                  tACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAtt                     >  8:369018/1‑148 (MQ=255)
                                                                                                                                  tACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATACTGATCCGAGGGTTGTATAACAGGTATATCTAATGACATGCAAAAAta                     >  5:26285/1‑147 (MQ=255)
                                                                                                                                  tACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAAAGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAtt                     >  6:271273/1‑148 (MQ=255)
                                                                                                                                    cGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTaaa                  >  8:101024/1‑149 (MQ=255)
                                                                                                                                    cGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTaaa                  <  8:42200/149‑1 (MQ=255)
                                                                                                                                    cGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTaa                   <  7:222291/148‑1 (MQ=255)
                                                                                                                                     gATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAAt                 <  8:281949/149‑1 (MQ=255)
                                                                                                                                       ttAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAAt                 >  3:225588/1‑147 (MQ=255)
                                                                                                                                         aGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAg              <  6:213989/148‑1 (MQ=255)
                                                                                                                                          gTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTc                                                               <  1:257446/98‑1 (MQ=255)
                                                                                                                                          gTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTc                                                               >  2:257446/1‑98 (MQ=255)
                                                                                                                                          gTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGtt            <  3:247261/149‑1 (MQ=255)
                                                                                                                                           tACCGTCAGTTAATACAGGAACTTATAATCGCAAAGGATTTTCAATACAAAGTTGTTTAAACGCTTTTGGTCCTTATATAGGACCTCGATTCTGTTACGATGGTTGTATAACTTGTTTATATAATGAAATGCAAAAATTAAATTAGtt            >  5:65517/1‑148 (MQ=255)
                                                                                                                                              cGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAata        <  3:18036/149‑1 (MQ=255)
                                                                                                                                                  aGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTg                                                                                           >  3:239761/1‑62 (MQ=255)
                                                                                                                                                  aGTTAAAATATGAACTTATAATCTAAATTGATTTTAAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACTTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATAtttt    <  6:65517/149‑1 (MQ=255)
                                                                                                                                                   gTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTg                                                                  <  7:364614/86‑1 (MQ=255)
                                                                                                                                                   gTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAtt                     <  2:278460/131‑1 (MQ=255)
                                                                                                                                                   gTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAAtt                     >  1:278460/1‑131 (MQ=255)
                                                                                                                                                   gTTAATACAGGAACTTATAATCGCAATGGATTTTAAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATACTg                                                                  >  8:364614/1‑86 (MQ=255)
                                                                                                                                                    ttAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCa  <  7:230381/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCA  >  NC_000913/3768927‑3769223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.