New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3269728	65 (2.200)	4 (0.140)	4/246	2.9	5.9%	noncoding (7/98 nt)	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 3269739	67 (2.400)					noncoding (18/98 nt)	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Frequency below/above cutoff threshold.

CCTTTTAAATGCAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAC  >  NC_000913/3269584‑3269873                                                                                                                                                 |                                                                                                                                                  ccTTTTAAATGCAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATgcgc                                                                                                                                               >  2:137273/1‑149 (MQ=255)   ttttAAATGCAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTa                                                                                                                                             >  5:87845/1‑149 (MQ=255)            cAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTatca                                                                                                                                    >  3:38238‑M2/1‑145 (MQ=255)                      ttAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                           >  3:84290/1‑148 (MQ=255)                           aaCTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCAtctc                                                                                                                     >  5:30633/1‑149 (MQ=255)                            aCTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATctct                                                                                                                    >  6:77281/1‑149 (MQ=255)                                cttACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCa                                                                                                                 <  5:77281/148‑1 (MQ=255)                                          cTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCCCCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAACATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAt                                                                                                      >  8:101056/1‑149 (MQ=255)                                           tattatTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAtt                                                                                                     >  7:89795/1‑149 (MQ=255)                                             ttattaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTg                                                                                                   >  4:7594/1‑149 (MQ=255)                                             ttattaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTg                                                                                                   >  2:68171/1‑149 (MQ=255)                                               attaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCtt                                                                                                                                        >  4:114107/1‑110 (MQ=255)                                               attaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCtt                                                                                                                                        <  3:114107/110‑1 (MQ=255)                                                ttaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCg                                                                                                 <  6:30633/148‑1 (MQ=255)                                                  aaTACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATaagcgtagcgcatcaggcatttttgcggttgccatcagtt                                                                                                           <  2:614‑M1/136‑41 (MQ=255)                                                  aaTACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATaagcgtagcgcatcaggcatttttgcggttgccatcagtt                                                                                                           >  1:614‑M1/1‑96 (MQ=255)                                                              atttattCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAg                                                                                  >  1:52352/1‑149 (MQ=255)                                                                  attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATaagcgtagcgcatcaggcattttt                                                                                                                           >  7:72093‑M1/1‑80 (MQ=255)                                                                  attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATaagcgtagcgcatcaggcattttt                                                                                                                           <  8:72093‑M1/104‑25 (MQ=255)                                                                  attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAt                                                                               >  5:33939/1‑148 (MQ=255)                                                                  attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAt                                                                               >  1:161985/1‑148 (MQ=255)                                                                   ttCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATaa                                                                             <  1:137273/149‑1 (MQ=255)                                                                     cATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAg                                                                            <  8:89795/148‑1 (MQ=255)                                                                           aCCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                  <  5:72584/120‑1 (MQ=255)                                                                           aCCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                  >  6:72584/1‑120 (MQ=255)                                                                            cccTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAg                                                                                      >  5:89009/1‑131 (MQ=255)                                                                            cccTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAg                                                                                      <  6:89009/131‑1 (MQ=255)                                                                              cTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAcgc                                                                  <  3:7594/149‑1 (MQ=255)                                                                              cTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAcgc                                                                  <  6:87845/149‑1 (MQ=255)                                                                                    aCCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATc                                                            >  3:7035/1‑149 (MQ=255)                                                                                     ccAAAAGCAAAAACTCACTGACGCGCGTTTGAAACTGAAGGCAACCGCAAAAAAGCCTGATGCGCTACGCTTATCAGGCCTCCGCCATCTCTCCAAAATATTGACTTTGCGAGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATcc                                                           >  3:109309/1‑149 (MQ=21)                                                                                      ctaaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAatata                                                                                                            <  6:95994/97‑1 (MQ=255)                                                                                      cAAAATCAAAAACTCACTGACGCGGGTTAGAAACTGATGGCAACCGCAAAAATGCCTGAAGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAatata                                                                                                            >  5:95994/1‑99 (MQ=255)                                                                                        aaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                  <  3:96742/107‑1 (MQ=255)                                                                                        aaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                  >  4:96742/1‑107 (MQ=255)                                                                                             aaaaaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGaa                                                   <  4:84290/149‑1 (MQ=255)                                                                                               aaaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAAt                                                  >  6:1374/1‑148 (MQ=255)                                                                                                aaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaa                                                <  1:68171/149‑1 (MQ=255)                                                                                                   tCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAgg                                                                                     <  2:46771/109‑1 (MQ=255)                                                                                                   tCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAgg                                                                                     >  1:46771/1‑109 (MQ=255)                                                                                                     aCTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAAGAATAAAgcg                                            >  4:71587/1‑148 (MQ=255)                                                                                                         aCGCGGGTTTGAACCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTGTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTc                                       <  7:101056/149‑1 (MQ=255)                                                                                                         aCGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACt                                        >  8:11735/1‑148 (MQ=255)                                                                                                             gggTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTcaac                                    >  4:44373/1‑148 (MQ=255)                                                                                                              ggTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTcaacaa                                  >  8:70695/1‑149 (MQ=255)                                                                                                               gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                    <  5:36639/82‑1 (MQ=255)                                                                                                               gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                    >  4:112279/1‑82 (MQ=255)                                                                                                               gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                    >  6:36639/1‑82 (MQ=255)                                                                                                               gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                    <  3:112279/82‑1 (MQ=255)                                                                                                                tttGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATc                                <  3:44373/149‑1 (MQ=255)                                                                                                                   gAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTg                              <  2:52352/148‑1 (MQ=255)                                                                                                                    aaaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGa                             >  6:27634/1‑148 (MQ=255)                                                                                                                     aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaataaatatctacggtatt                                        <  2:614‑M2/136‑97 (MQ=255)                                                                                                                     aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaataaatatctacggtatt                                        >  1:614‑M2/1‑40 (MQ=255)                                                                                                                     aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGaaa                           <  4:7035/149‑1 (MQ=255)                                                                                                                     aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGaaa                           <  2:161985/149‑1 (MQ=255)                                                                                                                          aTGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCa                                                                                   <  6:62206/88‑1 (MQ=255)                                                                                                                          aTGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCa                                                                                   >  5:62206/1‑88 (MQ=255)                                                                                                                           tGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                           >  1:51920/1‑47 (MQ=255)                                                                                                                           tGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                           <  2:51920/47‑1 (MQ=255)                                                                                                                               aaCCGCAAAAATGCCTGATGCGCTACGGTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCTTCCGGCATGAATAAAGCGCTCTCAACAATCTGAAACCCGCCGGaa                 <  4:109309/149‑1 (MQ=255)                                                                                                                                 ccGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCaa                                                                                                                <  4:91145/52‑1 (MQ=255)                                                                                                                                 ccGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCaa                                                                                                                >  3:91145/1‑52 (MQ=255)                                                                                                                                   gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGaa                                                                                                       >  8:24965/1‑59 (MQ=255)                                                                                                                                   gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGaa                                                                                                       <  7:24965/59‑1 (MQ=255)                                                                                                                                   gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGt             <  7:11735/149‑1 (MQ=255)                                                                                                                                     aaaaaTGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaat                                                        >  7:72093‑M2/1‑24 (MQ=255)                                                                                                                                     aaaaaTGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaat                                                        <  8:72093‑M2/104‑81 (MQ=255)                                                                                                                                      aaaaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta          <  7:70695/149‑1 (MQ=255)                                                                                                                                      aaaaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta          <  3:71587/149‑1 (MQ=255)                                                                                                                                          tGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTAc      <  5:1374/149‑1 (MQ=255)                                                                                                                                             cTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaaa                                               >  7:14271/1‑105 (MQ=255)                                                                                                                                             cTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaaa                                               <  8:14271/105‑1 (MQ=255)                                                                                                                                              tGATaagcgtagcgcatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaataaatatctacggtattaataatagactttgtaagaagttattaagtctatattg  >  3:38238‑M1/1‑4 (MQ=255)                                                                                                                                                aTGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAc  <  6:144870/147‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                  CCTTTTAAATGCAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAC  >  NC_000913/3269584‑3269873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.