New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3689302 =	45 (1.150)	5 (0.130)	5/252	3.8	9.7%	coding (960/1107 nt)	bcsZ	endo‑1,4‑D‑glucanase
	?	NC_000913	3689326 =	49 (1.290)					coding (936/1107 nt)	bcsZ	endo‑1,4‑D‑glucanase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3689346‑3689302 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGTTTTTCTCAGTGAATGTCGCCATCGGTTTAAACCGGTTGAGCAT  >  NC_000913/3689326‑3689472                                                                                                                                                                                                  CCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGT                                             >  3:16288/1‑149          CAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGTTTTTCTCA                                     <  4:16288/148‑1           AAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGTTTTTCTCAGT                                   >  5:82181/1‑149                CGCGATGCGCAGGCCGTTCAGCGCCAGCGCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGAC                                                                                                        >  3:92212/1‑75                CGCGATGCGCAGGCCGTTCAGCGCCAGCGCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGAC                                                                                                        <  4:92212/75‑1                                            GCATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGTTTTTCTCAGTGAATGTCGCCATCGGTTTAAACCGGTTGAGCAT  <  5:123169/149‑1                                                                                                                                                                                                  CCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3689346‑3689302 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcATCGCGGTTTTGTAAAAAGGGCAGCATGGCGGCAGAAAAACCGACTGGTCCTTTACCCTGCGCTTTCCCCGTAGCCACATCCACTTTTTCCGGCGGATAACCGTTTTTCTCAGTGAATGTCGCCATCGGTTTAAACCGGTTGAGCAT  >  NC_000913/3689326‑3689472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.