Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,906,168 IS5 (+) +4 bp 100% coding (397‑400/837 nt) bglG ← transcriptional antiterminator of the bgl operon

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)101 (1.220) 72/246 NT 97.0% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3906168 = 3 (0.040)coding (400/837 nt) bglG transcriptional antiterminator of the bgl operon
* ? NC_000913 = 3653230NA (NA)76 (0.900) 62/250 NT 96.1% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3906171 3 (0.040)coding (397/837 nt) bglG transcriptional antiterminator of the bgl operon

Only 100 of 190 total aligned reads displayed.

CGCATTAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCAAGCGCTCCT  >  NC_000913/3906026‑3906317
                                                                                                                                                 |                                                                                                                                                  
cgcATTAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAg                                                                                                                                                    >  5:224857/1‑146 (MQ=255)
cgcATTAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAg                                                                                                                                                    <  6:224857/146‑1 (MQ=255)
  cATTAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGgg                                                                                                                                                  <  2:70618‑M2/146‑3 (MQ=255)
   ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGa                                                                                                                                               <  6:195546‑M2/9‑1 (MQ=255)
     tAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggt                                                                                                                                             <  4:158143‑M2/148‑8 (MQ=255)
        acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAActct                                                                                                                                          >  7:12306‑M2/135‑148 (MQ=255)
          gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCttt                                                                                                                                        <  3:165206‑M2/16‑1 (MQ=255)
             ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcagacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcggaccttcgCTAGAGGGAACTCATTCgg                                                                                                                                     >  6:356356‑M2/130‑148 (MQ=255)
              gACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATACAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaag                                                                                                                                    <  1:339113‑M2/148‑17 (MQ=255)
                  tggcgaagcaacggtctaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtccgccgagaagaatttccccgcttattcgcgccttccCTAGCTGGAAGTCGTTCGGGTa                                                                                                                                  >  2:286959‑M2/125‑146 (MQ=255)
                        agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCt                                                                                                                          <  3:187062‑M2/30‑1 (MQ=255)
                        agaaacggtctaaataggctgattcaaggcatttaagggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacattcaCTAGCTGGAACTCTTTCGGGTAAAGCCGCt                                                                                                                          >  7:337412‑M2/119‑148 (MQ=255)
                             cggtctaaataggctgattcgaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGata                                                                                                                     >  8:282426‑M2/114‑148 (MQ=255)
                                cATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGTTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                  <  8:157291‑M2/148‑35 (MQ=255)
                                 ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATcc                                                                                                                  >  1:242852‑M2/110‑147 (MQ=255)
                                  tatTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatg                                                                                                                         <  8:277160‑M2/139‑28 (MQ=255)
                                  tatTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatg                                                                                                                         >  7:277160‑M2/1‑112 (MQ=255)
                                   atTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                               <  3:288679‑M2/148‑38 (MQ=255)
                                    aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCcac                                                                                                               <  7:31558‑M2/41‑1 (MQ=255)
                                     ttCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                              >  1:70618‑M2/1‑109 (MQ=255)
                                        ggctgattcaatgcatttacgggagaaataatcggctgaaacatgaagaaatgaaatgactgagtctgcagagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTATAGGCGCTTTATatcgcactgaa                                                                                                           <  8:337412‑M2/45‑5 (MQ=255)
                                        cGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                          >  2:339113‑M2/1‑106 (MQ=255)
                                             attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGt                                                                                                     >  4:90810‑M2/98‑148 (MQ=255)
                                             aTTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      >  1:384554‑M2/1‑101 (MQ=255)
                                              ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGtt                                                                                                    >  2:122324‑M2/97‑148 (MQ=255)
                                               ttGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgag                                                                                                                       <  1:379389‑M2/128‑30 (MQ=255)
                                                caaggcatttccgggagaaaaactcggctcaaacatgaagaaatgaaatgactgagtcagcctagactaagttccccgcttattcgcaccttccGTAGCTGGAACTCTTTCGGGTAAAGCCGCGGGATATCCCACAGCACCGGGTTg                                                                                                   <  3:88160‑M2/53‑1 (MQ=255)
                                                   ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTggg                                                                                                 >  2:368166‑M2/92‑146 (MQ=255)
                                                    gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttctccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGgcag                                                                                              <  4:168453‑M2/58‑1 (MQ=255)
                                                    gcatttacgggagaaaaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCTATCAGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCACCGGGTTGGgcag                                                                                              >  4:30319‑M2/91‑148 (MQ=255)
                                                       tGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                           <  4:132099‑M2/148‑58 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCaa                                                                                           >  4:108812‑M2/87‑147 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATccc                                                                                                                 <  2:263138‑M2/39‑1 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATccc                                                                                                                 >  1:263138‑M2/87‑125 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCaa                                                                                           >  8:412113‑M2/87‑147 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCaa                                                                                           >  3:344524‑M2/87‑147 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCaa                                                                                           >  6:28547‑M2/87‑147 (MQ=255)
                                                         aCCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTACCTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                           >  6:31925‑M2/1‑89 (MQ=255)
                                                            aGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaaca                                                                                                                                      >  5:333350‑M2/1‑86 (MQ=255)
                                                             ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGtt                                                                                     >  5:194653‑M2/82‑148 (MQ=255)
                                                             ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGtt                                                                                     <  7:412113‑M2/67‑1 (MQ=255)
                                                             ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGtt                                                                                     <  1:358227‑M2/67‑1 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTg                                                                                  >  6:50028‑M2/79‑148 (MQ=255)
                                                                   tGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                                                                               >  4:283915‑M2/1‑79 (MQ=255)
                                                                     gCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                             >  3:132099‑M2/1‑77 (MQ=255)
                                                                        aTAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgat                                                                           <  7:345664‑M2/147‑74 (MQ=255)
                                                                         tAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                          <  8:56041‑M2/147‑75 (MQ=255)
                                                                         ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttaatcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCg                                                                         <  1:111824‑M2/79‑1 (MQ=255)
                                                                             caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTTGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGt                                                                        <  4:87782‑M2/80‑1 (MQ=255)
                                                                              cccACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgattcatcaa                                                                    >  8:345664‑M2/1‑68 (MQ=255)
                                                                              cccACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                    <  1:47578‑M2/148‑81 (MQ=255)
                                                                               ccACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                   >  2:137306‑M2/1‑67 (MQ=255)
                                                                               ccACTTCATCTTTCGGTAACTGACCGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggggcgtacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggctcatcatgagtcatcaac                                                                   >  4:322925‑M2/1‑67 (MQ=255)
                                                                                  cTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                >  7:157291‑M2/1‑64 (MQ=255)
                                                                                   tgtagtaatgtaatgactgagtcagccgagaagaatttccccgcttattcgctccttccCTAGGTGGAACTCTTTCGGGTTAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACTCGTTTTGCTGAAATCGTTTAATCGCa                                                               <  4:63391‑M2/89‑1 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                               <  2:110893‑M2/147‑86 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggattcatcatgagtcatcaacttacc                                                              <  5:75801‑M2/148‑87 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                        >  6:72008‑M2/1‑62 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                        <  5:72008‑M2/122‑61 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                   >  6:248454‑M2/1‑62 (MQ=255)
                                                                                    tCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                   <  5:248454‑M2/111‑50 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTgg                                                                                                                        <  3:86677‑M2/32‑1 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccacgattattcgcaaattccCTAGCTGGAACTCTTTCGGGTAAAGACGCTTGATATCCCACAGCAACCGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTATAATCGCa                                                               >  7:100038‑M2/59‑147 (MQ=255)
                                                                                     aagaaatgaaatgcctgactcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCaa                                                              <  7:301317‑M2/90‑1 (MQ=255)
                                                                                     aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCaa                                                              <  8:237108‑M2/90‑1 (MQ=255)
                                                                                     aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCaa                                                              <  1:123951‑M2/90‑1 (MQ=255)
                                                                                          ttCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                >  2:243752‑M2/1‑56 (MQ=255)
                                                                                           tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCa                                                       <  4:212583‑M2/97‑1 (MQ=255)
                                                                                             ggTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcttctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                                     >  8:12475‑M2/1‑53 (MQ=255)
                                                                                             ggTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                                     >  5:151389‑M2/1‑53 (MQ=255)
                                                                                                aaCTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                  <  7:274419‑M2/148‑99 (MQ=255)
                                                                                                  actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGt                                                  >  8:122669‑M2/45‑146 (MQ=255)
                                                                                                  actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTc                                                 <  1:286959‑M2/103‑1 (MQ=255)
                                                                                                   tGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                               <  2:178942‑M2/148‑102 (MQ=255)
                                                                                                       cGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattca                                           >  1:110893‑M2/1‑43 (MQ=255)
                                                                                                           cAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                       <  3:254979‑M2/148‑110 (MQ=255)
                                                                                                             cgagaagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCgaga                                      >  8:4103‑M2/34‑147 (MQ=255)
                                                                                                             cgagaagaatttccccgcttattcgcacctaccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAg                                           <  8:158304‑M2/109‑1 (MQ=255)
                                                                                                             aCCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                      <  7:296862‑M2/147‑111 (MQ=255)
                                                                                                                 aagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAg                                                                           <  4:84928‑M2/77‑1 (MQ=255)
                                                                                                                 aagaatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAg                                                                           >  3:84928‑M2/30‑106 (MQ=255)
                                                                                                                    aatttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATa                              >  2:393928‑M2/27‑148 (MQ=255)
                                                                                                                      cAATAATGGTTAACGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                         >  6:205442‑M2/1‑28 (MQ=255)
                                                                                                                       ttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAacac                                                                                        <  6:126755‑M2/64‑1 (MQ=255)
                                                                                                                       ttccccgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTg                           >  1:164425‑M2/24‑148 (MQ=255)
                                                                                                                         taatGGTTAACGCTTCTTCCCCTAGggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                         <  7:307759‑M2/148‑124 (MQ=255)
                                                                                                                            cgcttattcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACATTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTg                      >  4:342141‑M2/19‑148 (MQ=255)
                                                                                                                              cttattcgcaccttccCTAGCAGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCtata                    <  5:28547‑M2/132‑1 (MQ=255)
                                                                                                                                 attcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGACAGTTAGCGAGATATAAATACTGTCCTGTAAtt                 >  1:85655‑M2/14‑148 (MQ=255)
                                                                                                                                 aaCGCTTCTTCCCCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                  >  1:178942‑M2/1‑17 (MQ=255)
                                                                                                                                  ttcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTg                                                                                                                         >  4:367245‑M2/13‑43 (MQ=255)
                                                                                                                                  ttcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTg                                                                                                                         <  3:367245‑M2/31‑1 (MQ=255)
                                                                                                                                  aCGCTTCTTCCCCTATCTGGAACTTTTTCGGGTAAAGCCGCTGTATTTGCCACTTCAACGTGTTGGGCAGCAAGACGTTTTGCTGAAAGAGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAAttt                <  6:338347/148‑1 (MQ=255)
                                                                                                                                   tcgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAAtttt               >  3:44813‑M2/12‑148 (MQ=255)
                                                                                                                                    cgcaccttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAAtttt               <  7:4103‑M2/137‑1 (MQ=255)
                                                                                                                                       accttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCTATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCa           <  5:50028‑M2/141‑1 (MQ=255)
                                                                                                                                       accttccCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCa           <  5:346201‑M2/141‑1 (MQ=255)
                                                                                                                                              cTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         <  7:168011‑M2/63‑60 (MQ=255)
                                                                                                                                              cTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACTTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCAAGCGCTc    <  2:154249/148‑1 (MQ=255)
                                                                                                                                                aGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCAAGCGCTCCt  >  7:136184/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CGCATTAACTGCGTGACACCTGCAACATCCTCCATATTTCCGCTCATTTGGGCACTGACCAGATGCATGGCAATAAAGCCCACTTCATCTTTCGGTAACTGCACGCCCAACCGTTTATCAATAATGGTTAACGCTTCTTCCCCTAGCTGGAACTCTTTCGGGTAAAGCCGCTGGATATCCCACAGCAACGGGTTGGGCAGCAACACGTTTTGCTGAAAGCGTTTAATCGCAAACTGGCAATGGTCAGTTAGCGAGATATAAATACTGTCCTGTAATTTTCCCAAGCGCTCCT  >  NC_000913/3906026‑3906317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.